prot_S-dermatodea_contig10512.364.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_S-dermatodea_contig10512.364.1
Unique Name	prot_S-dermatodea_contig10512.364.1
Type	polypeptide
Organism	Saccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length	212

Homology

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BLAST of mRNA_S-dermatodea_contig10512.364.1 vs. uniprot
Match: D8LRJ6_ECTSI (Cyclin H n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRJ6_ECTSI)

HSP 1 Score: 315 bits (806), Expect = 1.860e-104
Identity = 164/211 (77.73%), Postives = 179/211 (84.83%), Query Frame = 0

Query:    1 HTRRVRSLTCVFLASKTEEQITNVSLLAKATGRDDLQILGKELMLLQGLSFHLAVFHPYRALPALVEGARQKAKAEGIPPQSERILALHDGARAALDDILVTDLPFLHPPSRLALAALLREGRQMEAPPFNVGSMLSKEFGDREGWAGVLAEASKLAQELDSVLPYRVEKEKLIAVNKKLKKHALWSEKRGGGXXXXXXXXXXXKKIKTEA 211
            H  ++  LTCVFLASKTEEQ+TNV+LLAKATG DDLQILGKEL LLQGLSFHLAVFHPYRALPALVEGAR KAK EGIPPQ ERI+ALHDGARAALDDI+VTDLPFLHPPSRLALAALLRE R+MEAPPF++ ++L KEFGDREGW  VL EA +LA ELD +LPYRVEK+KLIAVNKKLKKHA WS+KRG             KKIKTEA
Sbjct:  168 HDPKILILTCVFLASKTEEQMTNVNLLAKATGLDDLQILGKELTLLQGLSFHLAVFHPYRALPALVEGARLKAKTEGIPPQPERIMALHDGARAALDDIVVTDLPFLHPPSRLALAALLRESRRMEAPPFDLPALLGKEFGDREGWKDVLREAQRLALELDEILPYRVEKDKLIAVNKKLKKHAWWSQKRGRAEGGGGRERRKSKKIKTEA 378

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BLAST of mRNA_S-dermatodea_contig10512.364.1 vs. uniprot
Match: F0W4T4_9STRA (CyclinH putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W4T4_9STRA)

HSP 1 Score: 83.6 bits (205), Expect = 2.740e-15
Identity = 43/110 (39.09%), Postives = 72/110 (65.45%), Query Frame = 0

Query:    9 TCVFLASKTEEQITNVSLLAKATGRDDLQILGKELMLLQGLSFHLAVFHPYRALPALVEGARQKAKAEGIPPQSERILALHDGARAALDDILVTDLPFLHPPSRLALAAL 118
            T +++A+K EEQ  +V  +A+    D   ++G E++LL+G+ FHL ++HP+R L A V+  R  AKA+G     E + +LH  A + ++++L+TD   L+ P++LALAAL
Sbjct:  157 TVIYVAAKVEEQYISVETIAEQLKVDHKHVIGHEMILLEGVRFHLIMYHPFRPLLAFVDDLRIYAKAQGKQLSLELLQSLHTKANSVVNELLLTDATLLYHPAQLALAAL 266

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BLAST of mRNA_S-dermatodea_contig10512.364.1 vs. uniprot
Match: A0A024GEU2_9STRA (CYCLIN domain-containing protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GEU2_9STRA)

HSP 1 Score: 82.8 bits (203), Expect = 5.430e-15
Identity = 43/110 (39.09%), Postives = 70/110 (63.64%), Query Frame = 0

Query:    9 TCVFLASKTEEQITNVSLLAKATGRDDLQILGKELMLLQGLSFHLAVFHPYRALPALVEGARQKAKAEGIPPQSERILALHDGARAALDDILVTDLPFLHPPSRLALAAL 118
            T +++A+K EEQ  +V  +A+    D   ++G E++LL+G+ FHL ++HP+R L   V+  R  AKA+G     E +  LH  A   +++ L+TD+P L+ P++LALAAL
Sbjct:  167 TVIYVAAKVEEQYISVETIAEHLKVDHKHVIGHEMILLEGVRFHLIMYHPFRPLLGFVDDLRLYAKAKGKQLPLELLQILHTKASVVVNEFLLTDVPLLYHPAQLALAAL 276

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BLAST of mRNA_S-dermatodea_contig10512.364.1 vs. uniprot
Match: A0A8K1C540_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C540_PYTOL)

HSP 1 Score: 80.5 bits (197), Expect = 3.600e-14
Identity = 48/141 (34.04%), Postives = 79/141 (56.03%), Query Frame = 0

Query:    9 TCVFLASKTEEQITNVSLLAKATGRDDLQILGKELMLLQGLSFHLAVFHPYRALPALVEGARQKAKAEGIPPQSERILALHDGARAALDDILVTDLPFLHPPSRLALAAL--LREGRQMEAPPFNVGSMLSKEFGDREGWA 147
            T +++A K EEQ  NV  +A     D   ++  E++LL+G+ F L ++HP+RAL   V+  R  +KA+G     E +  LH  +   ++++L+T+LP +H P+ LALAAL  + E  + E P   V    + E+  R  +A
Sbjct:  174 TAIYVAGKVEEQYINVDTIADQLKVDHKHVIDHEMILLEGVRFQLIMYHPFRALLGFVDDFRGFSKAQGRDLPLEALQKLHANSCVVVNELLLTELPLVHYPAYLALAALCHVAEELERETPALKVTKADALEYIKRSKFA 314

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BLAST of mRNA_S-dermatodea_contig10512.364.1 vs. uniprot
Match: A0A662YDE0_9STRA (CYCLIN domain-containing protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YDE0_9STRA)

HSP 1 Score: 77.0 bits (188), Expect = 5.920e-13
Identity = 47/113 (41.59%), Postives = 70/113 (61.95%), Query Frame = 0

Query:    9 TCVFLASKTEEQITNVSLLAKATGRDDLQILGKELMLLQGLSFHLAVFHPYRALPALVEGARQKAK---AEGIPPQSERILALHDGARAALDDILVTDLPFLHPPSRLALAAL 118
            T +++A K EEQ  +V  +A     D   I+G E++LL+G+ F L ++HP+RAL   ++  R  AK   A+ +P  +  +  LH  + A L+D+L+TDLP LH PS LALAAL
Sbjct:  164 TAIYVAGKVEEQYMSVDTVADQLHVDHKFIIGHEMVLLEGVRFQLIMYHPFRALLGFLDDFRVFAKQALAKELP--ANVLQKLHANSSALLNDLLLTDLPLLHYPSYLALAAL 274

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BLAST of mRNA_S-dermatodea_contig10512.364.1 vs. uniprot
Match: G4ZND2_PHYSP (CYCLIN domain-containing protein n=5 Tax=Phytophthora TaxID=4783 RepID=G4ZND2_PHYSP)

HSP 1 Score: 76.3 bits (186), Expect = 1.090e-12
Identity = 46/111 (41.44%), Postives = 67/111 (60.36%), Query Frame = 0

Query:    9 TCVFLASKTEEQITNVSLLAKATGRDDLQILGKELMLLQGLSFHLAVFHPYRALPALVEGARQKAKAEGIPPQSERILA-LHDGARAALDDILVTDLPFLHPPSRLALAAL 118
            T +++A K EEQ  +V  +A     D   I+G E++LL+G+ F L ++HP+RAL   ++  R  AK       +  +L  LH  + A L+D+L+TDLP LH PS LALAAL
Sbjct:  163 TAIYVAGKVEEQYMSVDTVADQLHVDHKFIIGHEMILLEGVRFQLIMYHPFRALLGFLDDFRAFAKQVLKKDLAATVLQKLHANSTALLNDLLLTDLPLLHYPSYLALAAL 273

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BLAST of mRNA_S-dermatodea_contig10512.364.1 vs. uniprot
Match: A0A484DTU7_BRELC (CYCLIN domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DTU7_BRELC)

HSP 1 Score: 75.9 bits (185), Expect = 1.430e-12
Identity = 45/111 (40.54%), Postives = 68/111 (61.26%), Query Frame = 0

Query:    9 TCVFLASKTEEQITNVSLLAKATGRDDLQILGKELMLLQGLSFHLAVFHPYRALPALVEGARQKAKAE-GIPPQSERILALHDGARAALDDILVTDLPFLHPPSRLALAAL 118
            T +++A K EEQ  +V  +A     D  +I+G E++LL+G+ F L +++P+RAL   ++  R  AK    I   +  +  LH  + A L+D+L+TDLP LH PS LALAAL
Sbjct:  165 TAIYVAGKVEEQYISVDTVADQLQVDHKEIIGHEMILLEGVRFQLIMYYPFRALLGFLDDFRAFAKKVLKIDLPATVLQKLHSNSTAILNDMLLTDLPLLHYPSYLALAAL 275

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BLAST of mRNA_S-dermatodea_contig10512.364.1 vs. uniprot
Match: A0A3M6VVK4_9STRA (CYCLIN domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VVK4_9STRA)

HSP 1 Score: 75.9 bits (185), Expect = 1.460e-12
Identity = 46/113 (40.71%), Postives = 70/113 (61.95%), Query Frame = 0

Query:    9 TCVFLASKTEEQITNVSLLAKATGRDDLQILGKELMLLQGLSFHLAVFHPYRALPALVEGARQKAK---AEGIPPQSERILALHDGARAALDDILVTDLPFLHPPSRLALAAL 118
            T +++A K EEQ  +V  +A     D   I+G E++LL+G+ F L ++HP+RAL   ++  R  AK   ++ +P  +  +  LH  + A L+D+L+TDLP LH PS LALAAL
Sbjct:  163 TAIYVAGKVEEQYISVDTVADQLHVDHKFIIGHEMILLEGVRFQLIMYHPFRALLGFLDDFRAFAKQVLSKDLP--ATVLQKLHANSTALLNDMLLTDLPLLHYPSYLALAAL 273

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BLAST of mRNA_S-dermatodea_contig10512.364.1 vs. uniprot
Match: H3GBD3_PHYRM (CYCLIN domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GBD3_PHYRM)

HSP 1 Score: 75.5 bits (184), Expect = 2.030e-12
Identity = 46/113 (40.71%), Postives = 70/113 (61.95%), Query Frame = 0

Query:    9 TCVFLASKTEEQITNVSLLAKATGRDDLQILGKELMLLQGLSFHLAVFHPYRALPALVEGARQKAK---AEGIPPQSERILALHDGARAALDDILVTDLPFLHPPSRLALAAL 118
            T +++A K EEQ  +V  +A     D   I+G E++LL+G+ F L ++HP+RAL   ++  R  AK   ++ +P  +  +  LH  + A L+D+L+TDLP LH PS LALAAL
Sbjct:  163 TAIYVAGKVEEQYMSVDTVADQLHVDHKFIIGHEMILLEGVRFQLIMYHPFRALLGFLDDFRAFAKQVLSKDLP--ATVLQKLHANSTALLNDMLLTDLPLLHYPSVLALAAL 273

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BLAST of mRNA_S-dermatodea_contig10512.364.1 vs. uniprot
Match: A0A329SQ23_9STRA (CYCLIN domain-containing protein n=10 Tax=Phytophthora TaxID=4783 RepID=A0A329SQ23_9STRA)

HSP 1 Score: 73.6 bits (179), Expect = 9.420e-12
Identity = 45/111 (40.54%), Postives = 65/111 (58.56%), Query Frame = 0

Query:    9 TCVFLASKTEEQITNVSLLAKATGRDDLQILGKELMLLQGLSFHLAVFHPYRALPALVEGARQKAKAEGIPPQSERILA-LHDGARAALDDILVTDLPFLHPPSRLALAAL 118
            T +++A K EEQ  +V  +A     D   I+G E++LL+G+ F L ++HP+R L   ++  R  AK          +L  LH  + A L+D+L+TDLP LH PS LALAAL
Sbjct:  163 TAIYVAGKVEEQYMSVDTVADQLHVDHKFIIGHEMILLEGVRFQLIMYHPFRTLLGFLDDFRAFAKQVLKKDLPATVLQKLHANSTAILNDMLLTDLPLLHYPSYLALAAL 273

The following BLAST results are available for this feature:

BLAST of mRNA_S-dermatodea_contig10512.364.1 vs. uniprot

BLAST of mRNA_S-dermatodea_contig10512.364.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LRJ6_ECTSI	1.860e-104	77.73	Cyclin H n=1 Tax=Ectocarpus siliculosus TaxID=2880...	[more]
F0W4T4_9STRA	2.740e-15	39.09	CyclinH putative n=1 Tax=Albugo laibachii Nc14 Tax...	[more]
A0A024GEU2_9STRA	5.430e-15	39.09	CYCLIN domain-containing protein n=1 Tax=Albugo ca...	[more]
A0A8K1C540_PYTOL	3.600e-14	34.04	Uncharacterized protein n=1 Tax=Pythium oligandrum...	[more]
A0A662YDE0_9STRA	5.920e-13	41.59	CYCLIN domain-containing protein n=1 Tax=Nothophyt...	[more]
G4ZND2_PHYSP	1.090e-12	41.44	CYCLIN domain-containing protein n=5 Tax=Phytophth...	[more]
A0A484DTU7_BRELC	1.430e-12	40.54	CYCLIN domain-containing protein n=1 Tax=Bremia la...	[more]
A0A3M6VVK4_9STRA	1.460e-12	40.71	CYCLIN domain-containing protein n=1 Tax=Peronospo...	[more]
H3GBD3_PHYRM	2.030e-12	40.71	CYCLIN domain-containing protein n=1 Tax=Phytophth...	[more]
A0A329SQ23_9STRA	9.420e-12	40.54	CYCLIN domain-containing protein n=10 Tax=Phytopht...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR031658	Cyclin, C-terminal domain 2	PFAM	PF16899	Cyclin_C_2	coord: 57..126 e-value: 8.0E-8 score: 32.6
None	No IPR available	GENE3D	1.10.472.10		coord: 56..163 e-value: 1.2E-14 score: 56.3
None	No IPR available	PANTHER	PTHR10026:SF8	CYCLIN-H	coord: 8..186
None	No IPR available	PANTHER	PTHR10026	CYCLIN	coord: 8..186
IPR036915	Cyclin-like superfamily	SUPERFAMILY	47954	Cyclin-like	coord: 57..146
IPR036915	Cyclin-like superfamily	SUPERFAMILY	47954	Cyclin-like	coord: 8..55

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
S-dermatodea_contig10512	contig	S-dermatodea_contig10512:1564..8016 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_S-dermatodea_contig10512.364.1	mRNA_S-dermatodea_contig10512.364.1	Saccorhiza dermatodea SderLu1190fm monoicous	mRNA	S-dermatodea_contig10512 1564..8016 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_S-dermatodea_contig10512.364.1 ID=prot_S-dermatodea_contig10512.364.1|Name=mRNA_S-dermatodea_contig10512.364.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=212bp
HTRRVRSLTCVFLASKTEEQITNVSLLAKATGRDDLQILGKELMLLQGLS
FHLAVFHPYRALPALVEGARQKAKAEGIPPQSERILALHDGARAALDDIL
VTDLPFLHPPSRLALAALLREGRQMEAPPFNVGSMLSKEFGDREGWAGVL
AEASKLAQELDSVLPYRVEKEKLIAVNKKLKKHALWSEKRGGGGEGDGGQ
RRKRKKIKTEA*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR031658	Cyclin_C_2
IPR036915	Cyclin-like_sf