prot_S-dermatodea_contig10450.321.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig10450.321.1
Unique Nameprot_S-dermatodea_contig10450.321.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length100
Homology
BLAST of mRNA_S-dermatodea_contig10450.321.1 vs. uniprot
Match: D8LCK6_ECTSI (Protein transport protein SEC23 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LCK6_ECTSI)

HSP 1 Score: 183 bits (465), Expect = 3.780e-52
Identity = 88/99 (88.89%), Postives = 93/99 (93.94%), Query Frame = 0
Query:    1 MRATTVCGGWHSDANSLDPLVRGYDQEAAAVLMARVAVHRTETEEVADIMRWLDRSLIRLSAKFAQYEKDKPETFRLAQEFSMYPQYMFHLRRSQFLQV 99
            +RATTVCGGWHSD N L PLVRGYDQ+AAAVLMAR+AVHRTETEEVADIMRWLDRSLIRL AKFAQY KDKPE+FRLA EFSMYPQYMFHLRRSQFLQ+
Sbjct:  517 LRATTVCGGWHSDPNDLGPLVRGYDQQAAAVLMARIAVHRTETEEVADIMRWLDRSLIRLCAKFAQYTKDKPESFRLASEFSMYPQYMFHLRRSQFLQL 615          
BLAST of mRNA_S-dermatodea_contig10450.321.1 vs. uniprot
Match: A0A835YT42_9STRA (Protein transport protein SEC23 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YT42_9STRA)

HSP 1 Score: 157 bits (397), Expect = 1.150e-42
Identity = 74/98 (75.51%), Postives = 87/98 (88.78%), Query Frame = 0
Query:    1 MRATTVCGGWHSDANSLDPLVRGYDQEAAAVLMARVAVHRTETEEVADIMRWLDRSLIRLSAKFAQYEKDKPETFRLAQEFSMYPQYMFHLRRSQFLQ 98
            +R+TT+CG WHSDA SL P+   +DQ AAAVL ARVAV+RTETE+VADIMRWLDRSLIRL AKFA+Y KD+P +FRL++EFSMYPQ+MFHLRRSQFLQ
Sbjct:  525 LRSTTICGLWHSDAQSLQPIAASFDQAAAAVLTARVAVYRTETEDVADIMRWLDRSLIRLCAKFAEYRKDEPNSFRLSREFSMYPQFMFHLRRSQFLQ 622          
BLAST of mRNA_S-dermatodea_contig10450.321.1 vs. uniprot
Match: A0A7S2W7G0_9STRA (Protein transport protein SEC23 n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W7G0_9STRA)

HSP 1 Score: 152 bits (384), Expect = 6.630e-41
Identity = 72/99 (72.73%), Postives = 84/99 (84.85%), Query Frame = 0
Query:    1 MRATTVCGGWHSDANSLDPLVRGYDQEAAAVLMARVAVHRTETEEVADIMRWLDRSLIRLSAKFAQYEKDKPETFRLAQEFSMYPQYMFHLRRSQFLQV 99
            +R+TT+CGGWHSD     P+ R +DQEAAAVLMARVAV RT TEEVADI+RW+DRSLIRL AKFA Y KD+P +FRL  EFS+YPQ+MFHLRRSQFLQ+
Sbjct:  503 LRSTTLCGGWHSDPADSSPIGRSFDQEAAAVLMARVAVFRTSTEEVADILRWVDRSLIRLCAKFADYRKDEPNSFRLPPEFSIYPQFMFHLRRSQFLQL 601          
BLAST of mRNA_S-dermatodea_contig10450.321.1 vs. uniprot
Match: A0A6U3YQE8_9STRA (Protein transport protein SEC23 n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A6U3YQE8_9STRA)

HSP 1 Score: 152 bits (383), Expect = 9.480e-41
Identity = 69/99 (69.70%), Postives = 84/99 (84.85%), Query Frame = 0
Query:    1 MRATTVCGGWHSDANSLDPLVRGYDQEAAAVLMARVAVHRTETEEVADIMRWLDRSLIRLSAKFAQYEKDKPETFRLAQEFSMYPQYMFHLRRSQFLQV 99
            +RATT+CG WH+D   + PL R +DQE AAVLMAR+A HRT+TEEV DI+RWLDRSLIRL AKFA+Y KD+  +FRL+ EFS+YPQ+MFHLRRSQFLQ+
Sbjct:  516 LRATTLCGPWHNDTKDMSPLARSFDQETAAVLMARIATHRTDTEEVPDILRWLDRSLIRLCAKFAEYRKDEAASFRLSPEFSIYPQFMFHLRRSQFLQL 614          
BLAST of mRNA_S-dermatodea_contig10450.321.1 vs. uniprot
Match: A0A7S1G6C9_9STRA (Protein transport protein SEC23 n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1G6C9_9STRA)

HSP 1 Score: 148 bits (373), Expect = 2.660e-40
Identity = 69/99 (69.70%), Postives = 82/99 (82.83%), Query Frame = 0
Query:    1 MRATTVCGGWHSDANSLDPLVRGYDQEAAAVLMARVAVHRTETEEVADIMRWLDRSLIRLSAKFAQYEKDKPETFRLAQEFSMYPQYMFHLRRSQFLQV 99
            +R TTV G WH+DA++L P+   +DQEAAAVLMAR+AVHRTETE+  DI+RWLDRSLIRL AKFA Y KD P +FRL+  FS YPQ+MFHLRRSQFLQ+
Sbjct:  234 LRVTTVAGPWHTDASTLAPVASSFDQEAAAVLMARIAVHRTETEDTLDILRWLDRSLIRLCAKFADYHKDDPGSFRLSPSFSFYPQFMFHLRRSQFLQI 332          
BLAST of mRNA_S-dermatodea_contig10450.321.1 vs. uniprot
Match: A0A8J2WHU7_9STRA (Protein transport protein SEC23 n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WHU7_9STRA)

HSP 1 Score: 147 bits (372), Expect = 2.940e-39
Identity = 69/99 (69.70%), Postives = 82/99 (82.83%), Query Frame = 0
Query:    1 MRATTVCGGWHSDANSLDPLVRGYDQEAAAVLMARVAVHRTETEEVADIMRWLDRSLIRLSAKFAQYEKDKPETFRLAQEFSMYPQYMFHLRRSQFLQV 99
            +R TT+CG W  D +   P+ R +DQEAAAVLMARVAVHRTETEEVADI+RW+DRSLIRL AKFA Y KD P +FRL  EFS+YPQ++F+LRRSQFLQ+
Sbjct:  501 LRCTTLCGAWQPDPSDASPVARSFDQEAAAVLMARVAVHRTETEEVADILRWVDRSLIRLCAKFADYRKDDPSSFRLPHEFSVYPQFVFNLRRSQFLQL 599          
BLAST of mRNA_S-dermatodea_contig10450.321.1 vs. uniprot
Match: F0XWM5_AURAN (Protein transport protein SEC23 n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XWM5_AURAN)

HSP 1 Score: 145 bits (367), Expect = 1.450e-38
Identity = 68/99 (68.69%), Postives = 82/99 (82.83%), Query Frame = 0
Query:    1 MRATTVCGGWHSDANSLDPLVRGYDQEAAAVLMARVAVHRTETEEVADIMRWLDRSLIRLSAKFAQYEKDKPETFRLAQEFSMYPQYMFHLRRSQFLQV 99
            +R+TT+CG W  D N   P+ R +DQEAAAVLMARVAVHRTETEEV DI+RW+DRSLIRL AKFA Y KD P +FRL  EF++YPQ++F+LRRSQFLQ+
Sbjct:  507 LRSTTLCGAWQPDPNDSAPVARSFDQEAAAVLMARVAVHRTETEEVPDILRWVDRSLIRLCAKFADYRKDDPSSFRLPHEFAVYPQFVFNLRRSQFLQL 605          
BLAST of mRNA_S-dermatodea_contig10450.321.1 vs. uniprot
Match: A0A7S3HLG5_9STRA (Protein transport protein SEC23 n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HLG5_9STRA)

HSP 1 Score: 143 bits (360), Expect = 2.930e-38
Identity = 67/98 (68.37%), Postives = 79/98 (80.61%), Query Frame = 0
Query:    1 MRATTVCGGWHSDANSLDPLVRGYDQEAAAVLMARVAVHRTETEEVADIMRWLDRSLIRLSAKFAQYEKDKPETFRLAQEFSMYPQYMFHLRRSQFLQ 98
            +R TTVCGGWHSD     P+   +DQEAA VLMAR+AVHR  TE++AD+ RWLDRSLIRL+AKFA Y KD   +FRL QEFS+YPQ+MFHLRRS+FLQ
Sbjct:  264 LRVTTVCGGWHSDPADHAPIAASFDQEAATVLMARLAVHRCLTEDIADVQRWLDRSLIRLAAKFANYRKDDAASFRLPQEFSIYPQFMFHLRRSKFLQ 361          
BLAST of mRNA_S-dermatodea_contig10450.321.1 vs. uniprot
Match: A0A7S2CH11_9STRA (Protein transport protein SEC23 n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CH11_9STRA)

HSP 1 Score: 136 bits (343), Expect = 6.220e-38
Identity = 63/89 (70.79%), Postives = 75/89 (84.27%), Query Frame = 0
Query:   11 HSDANSLDPLVRGYDQEAAAVLMARVAVHRTETEEVADIMRWLDRSLIRLSAKFAQYEKDKPETFRLAQEFSMYPQYMFHLRRSQFLQV 99
            H D N   P+ R +DQEA+AVLMAR+A HRTETEEV DI+RW+DRSLIRL +KFA Y KD P +FRL+QEF+MYPQ+MFHLRRSQFLQ+
Sbjct:    1 HGDPNDASPIARSFDQEASAVLMARIATHRTETEEVPDILRWVDRSLIRLCSKFADYRKDDPGSFRLSQEFAMYPQFMFHLRRSQFLQL 89          
BLAST of mRNA_S-dermatodea_contig10450.321.1 vs. uniprot
Match: A0A7S2JSI2_9STRA (Protein transport protein SEC23 n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2JSI2_9STRA)

HSP 1 Score: 140 bits (352), Expect = 1.130e-37
Identity = 63/99 (63.64%), Postives = 80/99 (80.81%), Query Frame = 0
Query:    1 MRATTVCGGWHSDANSLDPLVRGYDQEAAAVLMARVAVHRTETEEVADIMRWLDRSLIRLSAKFAQYEKDKPETFRLAQEFSMYPQYMFHLRRSQFLQV 99
            +R+TT+CG WHSD N + P+   +DQEAAA+L AR+AVHRTETE+V D++ W+DRSLIRL+AKFA Y  D P +FRL   FS+YPQ+MFHLRRS FLQ+
Sbjct:  168 VRSTTLCGPWHSDPNDVTPIRASFDQEAAAILTARLAVHRTETEDVGDVLMWVDRSLIRLAAKFADYRPDDPSSFRLPHAFSIYPQFMFHLRRSPFLQL 266          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig10450.321.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LCK6_ECTSI3.780e-5288.89Protein transport protein SEC23 n=2 Tax=Ectocarpus... [more]
A0A835YT42_9STRA1.150e-4275.51Protein transport protein SEC23 n=1 Tax=Tribonema ... [more]
A0A7S2W7G0_9STRA6.630e-4172.73Protein transport protein SEC23 n=1 Tax=Rhizochrom... [more]
A0A6U3YQE8_9STRA9.480e-4169.70Protein transport protein SEC23 n=1 Tax=Dictyocha ... [more]
A0A7S1G6C9_9STRA2.660e-4069.70Protein transport protein SEC23 n=1 Tax=Bicosoecid... [more]
A0A8J2WHU7_9STRA2.940e-3969.70Protein transport protein SEC23 n=1 Tax=Pelagomona... [more]
F0XWM5_AURAN1.450e-3868.69Protein transport protein SEC23 n=1 Tax=Aureococcu... [more]
A0A7S3HLG5_9STRA2.930e-3868.37Protein transport protein SEC23 n=1 Tax=Spumella e... [more]
A0A7S2CH11_9STRA6.220e-3870.79Protein transport protein SEC23 n=1 Tax=Florenciel... [more]
A0A7S2JSI2_9STRA1.130e-3763.64Protein transport protein SEC23 n=1 Tax=Leptocylin... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006900Sec23/Sec24, helical domainPFAMPF04815Sec23_helicalcoord: 25..97
e-value: 1.2E-18
score: 66.8
NoneNo IPR availableGENE3D1.20.120.730coord: 15..99
e-value: 7.5E-35
score: 121.4
NoneNo IPR availablePANTHERPTHR11141:SF0SECRETORY 23, ISOFORM Ecoord: 1..99
IPR037364Protein transport protein Sec23PANTHERPTHR11141PROTEIN TRANSPORT PROTEIN SEC23coord: 1..99
IPR036175Sec23/Sec24 helical domain superfamilySUPERFAMILY81811Helical domain of Sec23/24coord: 25..99

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig10450contigS-dermatodea_contig10450:245..1398 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig10450.321.1mRNA_S-dermatodea_contig10450.321.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig10450 245..1401 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig10450.321.1 ID=prot_S-dermatodea_contig10450.321.1|Name=mRNA_S-dermatodea_contig10450.321.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=100bp
MRATTVCGGWHSDANSLDPLVRGYDQEAAAVLMARVAVHRTETEEVADIM
RWLDRSLIRLSAKFAQYEKDKPETFRLAQEFSMYPQYMFHLRRSQFLQV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006900Sec23/24_helical_dom
IPR037364Sec23
IPR036175Sec23/24_helical_dom_sf