mRNA_S-dermatodea_contig10383.279.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig10383.279.1 vs. uniprot
Match: D7FQG4_ECTSI (Cilia- and flagella-associated protein 52 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQG4_ECTSI) HSP 1 Score: 266 bits (679), Expect = 2.680e-80 Identity = 124/128 (96.88%), Postives = 126/128 (98.44%), Query Frame = 3
Query: 3 VISGGGDGRVRVWSVTSSHQAMSTSWKEHRGPVTCIQVSSENGQCISGSADGSCIVWDLNRGVRVLALFEPNVFKGVRYHPDESQYITCGSNHKITYWDAYDGTAIRVIEGGDEEMNTLDVEPSGETF 386
+ISGGGDGRVRVWSVTSSHQAM+TSWKEHRGPVTCIQVS ENGQCISGSADGSCIVWDLNRGVRVLALFEPNVFKGVRYHPDESQYITCGSNHKITYWDAYDGTAIRVIEGGDEEMNTLDVEPSGE F
Sbjct: 461 LISGGGDGRVRVWSVTSSHQAMTTSWKEHRGPVTCIQVSRENGQCISGSADGSCIVWDLNRGVRVLALFEPNVFKGVRYHPDESQYITCGSNHKITYWDAYDGTAIRVIEGGDEEMNTLDVEPSGEAF 588
BLAST of mRNA_S-dermatodea_contig10383.279.1 vs. uniprot
Match: A0A835Z6M8_9STRA (Cilia- and flagella-associated protein 52 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6M8_9STRA) HSP 1 Score: 211 bits (537), Expect = 6.440e-60 Identity = 96/128 (75.00%), Postives = 108/128 (84.38%), Query Frame = 3
Query: 3 VISGGGDGRVRVWSVTSSHQAMSTSWKEHRGPVTCIQVSSENGQCISGSADGSCIVWDLNRGVRVLALFEPNVFKGVRYHPDESQYITCGSNHKITYWDAYDGTAIRVIEGGDEEMNTLDVEPSGETF 386
VISGG DGRVRVWSVT SHQAM+ SWKEHRGPVTCI+VS +N C++ S DGSCIVWDL RGVR A+FEP VFK V YHPDESQY+TCGSNHKITYWDAYDG+AIR I+GG+E MN LDV+ +G F
Sbjct: 459 VISGGADGRVRVWSVTPSHQAMAISWKEHRGPVTCIKVSGDNRHCVTSSEDGSCIVWDLERGVRSQAMFEPTVFKSVAYHPDESQYLTCGSNHKITYWDAYDGSAIREIDGGEEGMNALDVDRNGCCF 586
BLAST of mRNA_S-dermatodea_contig10383.279.1 vs. uniprot
Match: A0A7S3H4V8_9STRA (Cilia- and flagella-associated protein 52 (Fragment) n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H4V8_9STRA) HSP 1 Score: 204 bits (520), Expect = 8.040e-58 Identity = 93/128 (72.66%), Postives = 109/128 (85.16%), Query Frame = 3
Query: 3 VISGGGDGRVRVWSVTSSHQAMSTSWKEHRGPVTCIQVSSENGQCISGSADGSCIVWDLNRGVRVLALFEPNVFKGVRYHPDESQYITCGSNHKITYWDAYDGTAIRVIEGGDEEMNTLDVEPSGETF 386
++SGGG+GRVR+W VTSSHQAM TS KEHRGPV CI+V+ + QCIS S+DGSCI+WDL+R VRV+ALFEPNVF+ V YHPDESQ +TCGSNHKITYWDA DG IRVIEGG++ M TLD+ PSGE F
Sbjct: 455 IVSGGGEGRVRIWKVTSSHQAMITSLKEHRGPVNCIKVNHDFTQCISASSDGSCIIWDLDRCVRVIALFEPNVFESVLYHPDESQMLTCGSNHKITYWDAADGQTIRVIEGGEDGMTTLDILPSGEFF 582
BLAST of mRNA_S-dermatodea_contig10383.279.1 vs. uniprot
Match: A0A6V1NYK3_HETAK (Cilia- and flagella-associated protein 52 n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NYK3_HETAK) HSP 1 Score: 203 bits (517), Expect = 5.720e-57 Identity = 88/128 (68.75%), Postives = 109/128 (85.16%), Query Frame = 3
Query: 3 VISGGGDGRVRVWSVTSSHQAMSTSWKEHRGPVTCIQVSSENGQCISGSADGSCIVWDLNRGVRVLALFEPNVFKGVRYHPDESQYITCGSNHKITYWDAYDGTAIRVIEGGDEEMNTLDVEPSGETF 386
+++GG DGRVRVW +TSSHQ++ S KEHRG V CI+V+++N QC++ SADGSCIVWD+ R VRV A+FEP VF+ V YHPDESQY+TCGSNHK+TYWDAYDG+AIRVI+GG+EEM LD+EP GE F
Sbjct: 459 LVTGGKDGRVRVWQITSSHQSLLHSMKEHRGEVNCIRVNAQNSQCVTASADGSCIVWDMERYVRVAAMFEPTVFRAVAYHPDESQYLTCGSNHKVTYWDAYDGSAIRVIDGGEEEMVCLDIEPQGELF 586
BLAST of mRNA_S-dermatodea_contig10383.279.1 vs. uniprot
Match: A0A482SVC4_9ARCH (Cilia- and flagella-associated protein 52 n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SVC4_9ARCH) HSP 1 Score: 189 bits (481), Expect = 5.100e-52 Identity = 86/128 (67.19%), Postives = 104/128 (81.25%), Query Frame = 3
Query: 3 VISGGGDGRVRVWSVTSSHQAMSTSWKEHRGPVTCIQVSSENGQCISGSADGSCIVWDLNRGVRVLALFEPNVFKGVRYHPDESQYITCGSNHKITYWDAYDGTAIRVIEGGDEEMNTLDVEPSGETF 386
++SGG +GRVR+W+VTSSHQAM S KEHRGP+ CI+V++++ QCIS S+DGSCI+WDL R VR+ ALFEPNVF V YHPDESQ +TCGSNHKI+YWDA D IR I GG++ M TLDV PSGE F
Sbjct: 422 IVSGGAEGRVRIWNVTSSHQAMIVSLKEHRGPINCIKVNADSTQCISASSDGSCIIWDLVRYVRLNALFEPNVFTNVLYHPDESQMLTCGSNHKISYWDATDAQVIRNITGGEDSMTTLDVLPSGEFF 549
BLAST of mRNA_S-dermatodea_contig10383.279.1 vs. uniprot
Match: A0A7S1U044_9STRA (Cilia- and flagella-associated protein 52 n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U044_9STRA) HSP 1 Score: 166 bits (421), Expect = 1.940e-43 Identity = 72/128 (56.25%), Postives = 98/128 (76.56%), Query Frame = 3
Query: 3 VISGGGDGRVRVWSVTSSHQAMSTSWKEHRGPVTCIQVSSENGQCISGSADGSCIVWDLNRGVRVLALFEPNVFKGVRYHPDESQYITCGSNHKITYWDAYDGTAIRVIEGGDEEMNTLDVEPSGETF 386
+++GG DGRVRVW++TSS+Q++ + KEHRGP+ I VS +N + +S S+DGSCI+WDL R VR+ ALFEP VF V+YHPDESQ +TC +N+KITYWDA G IRV++ D E+ +DV+ +GE F
Sbjct: 435 IVTGGMDGRVRVWNITSSYQSLLFNMKEHRGPINSIVVSPDNSRAVSASSDGSCIIWDLERYVRIAALFEPTVFNSVKYHPDESQLLTCSANYKITYWDAIHGDMIRVLDAADAEVCAVDVDEAGEAF 562
BLAST of mRNA_S-dermatodea_contig10383.279.1 vs. uniprot
Match: F0YDJ7_AURAN (Cilia- and flagella-associated protein 52 n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YDJ7_AURAN) HSP 1 Score: 164 bits (416), Expect = 1.210e-42 Identity = 74/128 (57.81%), Postives = 95/128 (74.22%), Query Frame = 3
Query: 3 VISGGGDGRVRVWSVTSSHQAMSTSWKEHRGPVTCIQVSSENGQCISGSADGSCIVWDLNRGVRVLALFEPNVFKGVRYHPDESQYITCGSNHKITYWDAYDGTAIRVIEGGDEEMNTLDVEPSGETF 386
+++GG DGRVRVW +T SHQA+ S KEHR VTCI++++E QCIS S DG+C+VW L R VR+ ALFEP +F V YHPD SQ +TCGSN KI+YW+A G AIRV++GGD EM L + +G+ F
Sbjct: 450 LLTGGVDGRVRVWKITHSHQALLNSMKEHRSAVTCIRITTERDQCISSSKDGACLVWCLERYVRLTALFEPTLFNSVLYHPDSSQILTCGSNMKISYWEASSGDAIRVVKGGDGEMTALAISDNGKYF 577
BLAST of mRNA_S-dermatodea_contig10383.279.1 vs. uniprot
Match: F0Y0S5_AURAN (Cilia- and flagella-associated protein 52 n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y0S5_AURAN) HSP 1 Score: 159 bits (401), Expect = 1.890e-40 Identity = 79/130 (60.77%), Postives = 98/130 (75.38%), Query Frame = 3
Query: 3 VISGGGDGRVRVWSVTSSHQAMSTSWKEHRGPVTCIQVSSENGQCISGSADGSCIVWDLNRGVRVLALFEPNVFKGVRYHPDESQYITCGSNHKITYWDAYDGTAIRVIEGG-DEEMNTLDVEP-SGETF 386
++SGG DGR+R W VT+SHQAM S KEHRG VT ++VS + + +S SADGSC+ +DL+ VR LALFEPNVF V +HPDESQ +T GSN+KITYWDAYD + IRV++G +EM LDVEP SG F
Sbjct: 471 LLSGGRDGRIRGWRVTTSHQAMLFSIKEHRGMVTALKVSEDGSKAVSASADGSCLSFDLHTQVRKLALFEPNVFTNVAWHPDESQLLTTGSNYKITYWDAYDASRIRVVDGSFTDEMTALDVEPKSGAWF 600
BLAST of mRNA_S-dermatodea_contig10383.279.1 vs. uniprot
Match: A0A7S2J730_9DINO (Cilia- and flagella-associated protein 52 (Fragment) n=1 Tax=Alexandrium andersonii TaxID=327968 RepID=A0A7S2J730_9DINO) HSP 1 Score: 144 bits (363), Expect = 1.870e-39 Identity = 66/126 (52.38%), Postives = 87/126 (69.05%), Query Frame = 3
Query: 12 GGGDGRVRVWSVTSSHQAMSTSWKEHRGPVTCIQVSSENGQCISGSADGSCIVWDLNRGVRVLALFEPNVFKGVRYHPDESQYITCGSNHKITYWDAYDGTAIRVIEGGDE-EMNTLDVEPSGETF 386
GG +G VR+W + Q M S KEHRG V CI++ +++ Q +S SADGSCI+WDLN R L LFE +FK + YHPDESQ +T GS+ KI+YWD +DG AIRV+EG +E E+ TL + SG +
Sbjct: 1 GGMEGEVRIWRIGQQTQTMDASLKEHRGRVFCIKIRADDSQAVSASADGSCIIWDLNTKTRSLCLFESTMFKSLVYHPDESQLLTTGSDRKISYWDTFDGQAIRVLEGSEEGELVTLSISASGSHY 126
BLAST of mRNA_S-dermatodea_contig10383.279.1 vs. uniprot
Match: A0A485LR92_9STRA (Cilia- and flagella-associated protein 52 n=4 Tax=Aphanomyces TaxID=100860 RepID=A0A485LR92_9STRA) HSP 1 Score: 155 bits (393), Expect = 2.540e-39 Identity = 73/129 (56.59%), Postives = 92/129 (71.32%), Query Frame = 3
Query: 3 VISGGGDGRVRVWSVTSSHQAMSTSWKEHRGPVTCIQVSSENGQCISGSADGSCIVWDLNRGVRVLALFEPNVFKGVRYHPDESQYITCGSNHKITYWDAYDGTAIRVIE-GGDEEMNTLDVEPSGETF 386
+I+GG DGRVRVW +T S Q M S KEHRGPV IQV +N C+S S+DGSCI W+L+ RV A+F VF+ + YHPDESQ +TCGS+ +ITY+D+YDG AIR++E D EM LD+E SG F
Sbjct: 477 LITGGKDGRVRVWRITPSRQTMEASMKEHRGPVNSIQVVHDNSSCVSASSDGSCISWNLDSFTRVQAMFASTVFRRILYHPDESQMLTCGSDRRITYYDSYDGEAIRILEEAADGEMLALDIEKSGNIF 605 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig10383.279.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig10383.279.1 >prot_S-dermatodea_contig10383.279.1 ID=prot_S-dermatodea_contig10383.279.1|Name=mRNA_S-dermatodea_contig10383.279.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=201bp MSTSWKEHRGPVTCIQVSSENGQCISGSADGSCIVWDLNRGVRVLALFEPback to top mRNA from alignment at S-dermatodea_contig10383:6327..7960+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig10383.279.1 ID=mRNA_S-dermatodea_contig10383.279.1|Name=mRNA_S-dermatodea_contig10383.279.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=1634bp|location=Sequence derived from alignment at S-dermatodea_contig10383:6327..7960+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig10383:6327..7960+ >mRNA_S-dermatodea_contig10383.279.1 ID=mRNA_S-dermatodea_contig10383.279.1|Name=mRNA_S-dermatodea_contig10383.279.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1206bp|location=Sequence derived from alignment at S-dermatodea_contig10383:6327..7960+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |