prot_S-dermatodea_contig10383.279.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_S-dermatodea_contig10383.279.1
Unique Name	prot_S-dermatodea_contig10383.279.1
Type	polypeptide
Organism	Saccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length	201

Homology

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BLAST of mRNA_S-dermatodea_contig10383.279.1 vs. uniprot
Match: D7FQG4_ECTSI (Cilia- and flagella-associated protein 52 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQG4_ECTSI)

HSP 1 Score: 226 bits (575), Expect = 1.130e-66
Identity = 104/107 (97.20%), Postives = 105/107 (98.13%), Query Frame = 0

Query:    1 MSTSWKEHRGPVTCIQVSSENGQCISGSADGSCIVWDLNRGVRVLALFEPNVFKGVRYHPDESQYITCGSNHKITYWDAYDGTAIRVIEGGDEEMNTLDVEPSGETF 107
            M+TSWKEHRGPVTCIQVS ENGQCISGSADGSCIVWDLNRGVRVLALFEPNVFKGVRYHPDESQYITCGSNHKITYWDAYDGTAIRVIEGGDEEMNTLDVEPSGE F
Sbjct:  482 MTTSWKEHRGPVTCIQVSRENGQCISGSADGSCIVWDLNRGVRVLALFEPNVFKGVRYHPDESQYITCGSNHKITYWDAYDGTAIRVIEGGDEEMNTLDVEPSGEAF 588

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BLAST of mRNA_S-dermatodea_contig10383.279.1 vs. uniprot
Match: A0A835Z6M8_9STRA (Cilia- and flagella-associated protein 52 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6M8_9STRA)

HSP 1 Score: 174 bits (441), Expect = 1.310e-47
Identity = 77/107 (71.96%), Postives = 89/107 (83.18%), Query Frame = 0

Query:    1 MSTSWKEHRGPVTCIQVSSENGQCISGSADGSCIVWDLNRGVRVLALFEPNVFKGVRYHPDESQYITCGSNHKITYWDAYDGTAIRVIEGGDEEMNTLDVEPSGETF 107
            M+ SWKEHRGPVTCI+VS +N  C++ S DGSCIVWDL RGVR  A+FEP VFK V YHPDESQY+TCGSNHKITYWDAYDG+AIR I+GG+E MN LDV+ +G  F
Sbjct:  480 MAISWKEHRGPVTCIKVSGDNRHCVTSSEDGSCIVWDLERGVRSQAMFEPTVFKSVAYHPDESQYLTCGSNHKITYWDAYDGSAIREIDGGEEGMNALDVDRNGCCF 586

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BLAST of mRNA_S-dermatodea_contig10383.279.1 vs. uniprot
Match: A0A6V1NYK3_HETAK (Cilia- and flagella-associated protein 52 n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NYK3_HETAK)

HSP 1 Score: 172 bits (435), Expect = 1.030e-46
Identity = 74/104 (71.15%), Postives = 89/104 (85.58%), Query Frame = 0

Query:    4 SWKEHRGPVTCIQVSSENGQCISGSADGSCIVWDLNRGVRVLALFEPNVFKGVRYHPDESQYITCGSNHKITYWDAYDGTAIRVIEGGDEEMNTLDVEPSGETF 107
            S KEHRG V CI+V+++N QC++ SADGSCIVWD+ R VRV A+FEP VF+ V YHPDESQY+TCGSNHK+TYWDAYDG+AIRVI+GG+EEM  LD+EP GE F
Sbjct:  483 SMKEHRGEVNCIRVNAQNSQCVTASADGSCIVWDMERYVRVAAMFEPTVFRAVAYHPDESQYLTCGSNHKVTYWDAYDGSAIRVIDGGEEEMVCLDIEPQGELF 586

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BLAST of mRNA_S-dermatodea_contig10383.279.1 vs. uniprot
Match: A0A7S3H4V8_9STRA (Cilia- and flagella-associated protein 52 (Fragment) n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H4V8_9STRA)

HSP 1 Score: 167 bits (424), Expect = 1.950e-45
Identity = 77/107 (71.96%), Postives = 89/107 (83.18%), Query Frame = 0

Query:    1 MSTSWKEHRGPVTCIQVSSENGQCISGSADGSCIVWDLNRGVRVLALFEPNVFKGVRYHPDESQYITCGSNHKITYWDAYDGTAIRVIEGGDEEMNTLDVEPSGETF 107
            M TS KEHRGPV CI+V+ +  QCIS S+DGSCI+WDL+R VRV+ALFEPNVF+ V YHPDESQ +TCGSNHKITYWDA DG  IRVIEGG++ M TLD+ PSGE F
Sbjct:  476 MITSLKEHRGPVNCIKVNHDFTQCISASSDGSCIIWDLDRCVRVIALFEPNVFESVLYHPDESQMLTCGSNHKITYWDAADGQTIRVIEGGEDGMTTLDILPSGEFF 582

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BLAST of mRNA_S-dermatodea_contig10383.279.1 vs. uniprot
Match: A0A482SVC4_9ARCH (Cilia- and flagella-associated protein 52 n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SVC4_9ARCH)

HSP 1 Score: 154 bits (390), Expect = 1.730e-40
Identity = 71/107 (66.36%), Postives = 84/107 (78.50%), Query Frame = 0

Query:    1 MSTSWKEHRGPVTCIQVSSENGQCISGSADGSCIVWDLNRGVRVLALFEPNVFKGVRYHPDESQYITCGSNHKITYWDAYDGTAIRVIEGGDEEMNTLDVEPSGETF 107
            M  S KEHRGP+ CI+V++++ QCIS S+DGSCI+WDL R VR+ ALFEPNVF  V YHPDESQ +TCGSNHKI+YWDA D   IR I GG++ M TLDV PSGE F
Sbjct:  443 MIVSLKEHRGPINCIKVNADSTQCISASSDGSCIIWDLVRYVRLNALFEPNVFTNVLYHPDESQMLTCGSNHKISYWDATDAQVIRNITGGEDSMTTLDVLPSGEFF 549

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BLAST of mRNA_S-dermatodea_contig10383.279.1 vs. uniprot
Match: A0A7S2J730_9DINO (Cilia- and flagella-associated protein 52 (Fragment) n=1 Tax=Alexandrium andersonii TaxID=327968 RepID=A0A7S2J730_9DINO)

HSP 1 Score: 128 bits (322), Expect = 1.310e-34
Identity = 59/108 (54.63%), Postives = 77/108 (71.30%), Query Frame = 0

Query:    1 MSTSWKEHRGPVTCIQVSSENGQCISGSADGSCIVWDLNRGVRVLALFEPNVFKGVRYHPDESQYITCGSNHKITYWDAYDGTAIRVIEGGDE-EMNTLDVEPSGETF 107
            M  S KEHRG V CI++ +++ Q +S SADGSCI+WDLN   R L LFE  +FK + YHPDESQ +T GS+ KI+YWD +DG AIRV+EG +E E+ TL +  SG  +
Sbjct:   19 MDASLKEHRGRVFCIKIRADDSQAVSASADGSCIIWDLNTKTRSLCLFESTMFKSLVYHPDESQLLTTGSDRKISYWDTFDGQAIRVLEGSEEGELVTLSISASGSHY 126

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BLAST of mRNA_S-dermatodea_contig10383.279.1 vs. uniprot
Match: A0A7S1U044_9STRA (Cilia- and flagella-associated protein 52 n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U044_9STRA)

HSP 1 Score: 136 bits (343), Expect = 6.810e-34
Identity = 59/102 (57.84%), Postives = 76/102 (74.51%), Query Frame = 0

Query:    6 KEHRGPVTCIQVSSENGQCISGSADGSCIVWDLNRGVRVLALFEPNVFKGVRYHPDESQYITCGSNHKITYWDAYDGTAIRVIEGGDEEMNTLDVEPSGETF 107
            KEHRGP+  I VS +N + +S S+DGSCI+WDL R VR+ ALFEP VF  V+YHPDESQ +TC +N+KITYWDA  G  IRV++  D E+  +DV+ +GE F
Sbjct:  461 KEHRGPINSIVVSPDNSRAVSASSDGSCIIWDLERYVRIAALFEPTVFNSVKYHPDESQLLTCSANYKITYWDAIHGDMIRVLDAADAEVCAVDVDEAGEAF 562

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BLAST of mRNA_S-dermatodea_contig10383.279.1 vs. uniprot
Match: F0YDJ7_AURAN (Cilia- and flagella-associated protein 52 n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YDJ7_AURAN)

HSP 1 Score: 134 bits (336), Expect = 7.000e-33
Identity = 60/104 (57.69%), Postives = 76/104 (73.08%), Query Frame = 0

Query:    4 SWKEHRGPVTCIQVSSENGQCISGSADGSCIVWDLNRGVRVLALFEPNVFKGVRYHPDESQYITCGSNHKITYWDAYDGTAIRVIEGGDEEMNTLDVEPSGETF 107
            S KEHR  VTCI++++E  QCIS S DG+C+VW L R VR+ ALFEP +F  V YHPD SQ +TCGSN KI+YW+A  G AIRV++GGD EM  L +  +G+ F
Sbjct:  474 SMKEHRSAVTCIRITTERDQCISSSKDGACLVWCLERYVRLTALFEPTLFNSVLYHPDSSQILTCGSNMKISYWEASSGDAIRVVKGGDGEMTALAISDNGKYF 577

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BLAST of mRNA_S-dermatodea_contig10383.279.1 vs. uniprot
Match: A0A7S3CNF9_9SPIT (Cilia- and flagella-associated protein 52 (Fragment) n=1 Tax=Strombidium rassoulzadegani TaxID=1082188 RepID=A0A7S3CNF9_9SPIT)

HSP 1 Score: 126 bits (316), Expect = 8.820e-32
Identity = 58/108 (53.70%), Postives = 76/108 (70.37%), Query Frame = 0

Query:    1 MSTSWKEHRGPVTCIQVSSENGQCISGSADGSCIVWDLNRGVRVLALFEPNVFKGVRYHPDESQYITCGSNHKITYWDAYDGTAIRVIEGGDE-EMNTLDVEPSGETF 107
            M  S KEHRG V+ I+++ E+ Q +S S DGSCI+WD+    R++ LFE  +FK V YHPDESQ +T GSN KITYWD +DG AIR+++G D  E+N L +  SGE F
Sbjct:  132 MEGSLKEHRGRVSDIKINKEDTQAVSSSFDGSCIIWDIINSTRIMCLFESTMFKQVLYHPDESQVLTTGSNRKITYWDCFDGQAIRMLDGSDSGEINALSITESGEYF 239

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BLAST of mRNA_S-dermatodea_contig10383.279.1 vs. uniprot
Match: A0A7S3K6B6_EUPCR (Cilia- and flagella-associated protein 52 n=1 Tax=Euplotes crassus TaxID=5936 RepID=A0A7S3K6B6_EUPCR)

HSP 1 Score: 122 bits (307), Expect = 9.640e-32
Identity = 56/106 (52.83%), Postives = 74/106 (69.81%), Query Frame = 0

Query:    1 MSTSWKEHRGPVTCIQVSSENGQCISGSADGSCIVWDLNRGVRVLALFEPNVFKGVRYHPDESQYITCGSNHKITYWDAYDGTAIRVIEGGDE-EMNTLDVEPSGE 105
            M  S KEHR  V+ I++++ + Q +S S DGSCIVWDL    R++ LFE  +FK V YHPDESQ +T GS+ KITYWD YDG AIR+++G D  E+N +D+   GE
Sbjct:    1 MEASLKEHRARVSDIKINANDDQAVSSSHDGSCIVWDLENFTRIICLFESTMFKQVVYHPDESQLLTAGSDRKITYWDCYDGQAIRMLDGSDSGEINAIDITKEGE 106

The following BLAST results are available for this feature:

BLAST of mRNA_S-dermatodea_contig10383.279.1 vs. uniprot

BLAST of mRNA_S-dermatodea_contig10383.279.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FQG4_ECTSI	1.130e-66	97.20	Cilia- and flagella-associated protein 52 n=2 Tax=...	[more]
A0A835Z6M8_9STRA	1.310e-47	71.96	Cilia- and flagella-associated protein 52 n=1 Tax=...	[more]
A0A6V1NYK3_HETAK	1.030e-46	71.15	Cilia- and flagella-associated protein 52 n=2 Tax=...	[more]
A0A7S3H4V8_9STRA	1.950e-45	71.96	Cilia- and flagella-associated protein 52 (Fragmen...	[more]
A0A482SVC4_9ARCH	1.730e-40	66.36	Cilia- and flagella-associated protein 52 n=1 Tax=...	[more]
A0A7S2J730_9DINO	1.310e-34	54.63	Cilia- and flagella-associated protein 52 (Fragmen...	[more]
A0A7S1U044_9STRA	6.810e-34	57.84	Cilia- and flagella-associated protein 52 n=2 Tax=...	[more]
F0YDJ7_AURAN	7.000e-33	57.69	Cilia- and flagella-associated protein 52 n=1 Tax=...	[more]
A0A7S3CNF9_9SPIT	8.820e-32	53.70	Cilia- and flagella-associated protein 52 (Fragmen...	[more]
A0A7S3K6B6_EUPCR	9.640e-32	52.83	Cilia- and flagella-associated protein 52 n=1 Tax=...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001680	WD40 repeat	SMART	SM00320	WD40_4	coord: 81..120 e-value: 4.0E-4 score: 29.7 coord: 122..162 e-value: 0.0026 score: 27.0 coord: 41..78 e-value: 8.2 score: 11.2 coord: 1..37 e-value: 0.0013 score: 28.0
IPR001680	WD40 repeat	PFAM	PF00400	WD40	coord: 4..37 e-value: 2.3E-4 score: 21.9 coord: 129..161 e-value: 0.063 score: 14.2 coord: 96..119 e-value: 0.0065 score: 17.3
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 5..46 score: 10.943
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 130..163 score: 11.478
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 88..129 score: 11.745
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 2..198 e-value: 3.6E-37 score: 130.0
None	No IPR available	PANTHER	PTHR13720	WD-40 REPEAT PROTEIN	coord: 4..164
IPR033015	Cilia- and flagella-associated protein 52	PANTHER	PTHR13720:SF14	CILIA- AND FLAGELLA-ASSOCIATED PROTEIN 52	coord: 4..164
IPR019775	WD40 repeat, conserved site	PROSITE	PS00678	WD_REPEATS_1	coord: 24..38
IPR017986	WD40-repeat-containing domain	PROSITE	PS50294	WD_REPEATS_REGION	coord: 5..171 score: 26.419
IPR036322	WD40-repeat-containing domain superfamily	SUPERFAMILY	50978	WD40 repeat-like	coord: 4..181

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
S-dermatodea_contig10383	contig	S-dermatodea_contig10383:6392..7715 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_S-dermatodea_contig10383.279.1	mRNA_S-dermatodea_contig10383.279.1	Saccorhiza dermatodea SderLu1190fm monoicous	mRNA	S-dermatodea_contig10383 6327..7960 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_S-dermatodea_contig10383.279.1 ID=prot_S-dermatodea_contig10383.279.1|Name=mRNA_S-dermatodea_contig10383.279.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=201bp
MSTSWKEHRGPVTCIQVSSENGQCISGSADGSCIVWDLNRGVRVLALFEP
NVFKGVRYHPDESQYITCGSNHKITYWDAYDGTAIRVIEGGDEEMNTLDV
EPSGETFVSGGDDGLVKVWHYDDGLTTSIGSGHSGSVAAVRISPDRRIIV
SVGSEGGIFIWEMPPSLEITAKSGGGTGYPQSASSNVNRLANDVSRVSVR
*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001680	WD40_repeat
IPR015943	WD40/YVTN_repeat-like_dom_sf
IPR033015	CFAP52
IPR019775	WD40_repeat_CS
IPR017986	WD40_repeat_dom
IPR036322	WD40_repeat_dom_sf