prot_S-dermatodea_contig13731.2150.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig13731.2150.1
Unique Nameprot_S-dermatodea_contig13731.2150.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length139
Homology
BLAST of mRNA_S-dermatodea_contig13731.2150.1 vs. uniprot
Match: A0A6H5L6F7_9PHAE (Importin N-terminal domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L6F7_9PHAE)

HSP 1 Score: 261 bits (667), Expect = 8.470e-79
Identity = 129/139 (92.81%), Postives = 132/139 (94.96%), Query Frame = 0
Query:    1 MDAVQLGQVEALCETLYNSTDETARGHAQNQLLSLQTSAERIPQCQYILDHSENAYALLLASSSLTRLISNHWNNFTVPQRVEIRNYILNYLGSVGPSLTDYVRTSLIQLLCRITKLGWFDDQQHREVVDAVMRFLQVS 139
            MDA QL QVEALCETLYNSTDE AR HAQNQLLSLQTSAERIPQCQYILDHSENAYALLLASSSLTRLIS+HWNNFT PQRVEIRNYILNYLGSVGP LTDYVRTSLIQLLCRITKLGWFDDQ+HREVVDAVMRFLQ +
Sbjct:    1 MDAAQLVQVEALCETLYNSTDEAARSHAQNQLLSLQTSAERIPQCQYILDHSENAYALLLASSSLTRLISSHWNNFTTPQRVEIRNYILNYLGSVGPGLTDYVRTSLIQLLCRITKLGWFDDQRHREVVDAVMRFLQAT 139          
BLAST of mRNA_S-dermatodea_contig13731.2150.1 vs. uniprot
Match: A0A835YUW2_9STRA (RAN binding protein 16-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUW2_9STRA)

HSP 1 Score: 196 bits (497), Expect = 2.420e-55
Identity = 92/136 (67.65%), Postives = 114/136 (83.82%), Query Frame = 0
Query:    1 MDAVQLGQVEALCETLYNSTDETARGHAQNQLLSLQTSAERIPQCQYILDHSENAYALLLASSSLTRLISNHWNNFTVPQRVEIRNYILNYLGSVGPSLTDYVRTSLIQLLCRITKLGWFDDQQHREVVDAVMRFL 136
            MDA QL QVE+LC+ LYN+ +E  R  AQ QL+SLQ+S + IPQCQYILD+S+N YA LLAS+SLT+LI+ HWN+F+VPQRV+IRNYIL+YL S GPSL DYV T+L+QLLCRITKLGWFDD  HR++VD  ++FL
Sbjct:    3 MDAQQLAQVESLCDALYNAANEAQRASAQQQLMSLQSSVDYIPQCQYILDNSQNPYARLLASNSLTQLITQHWNSFSVPQRVDIRNYILSYLASQGPSLKDYVVTALVQLLCRITKLGWFDDAAHRDLVDETLKFL 138          
BLAST of mRNA_S-dermatodea_contig13731.2150.1 vs. uniprot
Match: A0A7S1USY4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1USY4_9STRA)

HSP 1 Score: 177 bits (449), Expect = 1.190e-54
Identity = 89/146 (60.96%), Postives = 110/146 (75.34%), Query Frame = 0
Query:    1 MDAVQLGQVEALCETLYNSTDETA-------RGHAQNQLLSLQTSAERIPQCQYILDHSENAYALLLASSSLTRLISNHWNNFTVPQRVEIRNYILNYLGSVGPSLTDYVRTSLIQLLCRITKLGWFDDQQHREVVDAVMRFLQVS 139
            MDA QL QVEALCETLY+    T+       R  AQ +LLSLQ+SAE IPQCQYILD S + YA L+AS+SLT LI+++WN+FTV QR++IRNY+L YL + GP L D+V  SLI+L+CRITKLGWFDD  HRE+ D V +FLQ +
Sbjct:    1 MDASQLAQVEALCETLYSGAPSTSEDGKPISRADAQARLLSLQSSAEYIPQCQYILDQSNSQYARLVASNSLTELITSYWNSFTVAQRIDIRNYVLGYLANRGPGLQDFVVVSLIKLVCRITKLGWFDDPTHRELADDVTKFLQAT 146          
BLAST of mRNA_S-dermatodea_contig13731.2150.1 vs. uniprot
Match: A0A2D4BKK5_PYTIN (Exportin-like protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BKK5_PYTIN)

HSP 1 Score: 190 bits (483), Expect = 2.020e-53
Identity = 87/139 (62.59%), Postives = 109/139 (78.42%), Query Frame = 0
Query:    1 MDAVQLGQVEALCETLYNSTDETARGHAQNQLLSLQTSAERIPQCQYILDHSENAYALLLASSSLTRLISNHWNNFTVPQRVEIRNYILNYLGSVGPSLTDYVRTSLIQLLCRITKLGWFDDQQHREVVDAVMRFLQVS 139
            MDA QL  +E LC  LY S  E+ R HAQ  +L LQ+SAE IPQCQY+LD+S + YALL+ASSSLT+LI+ HWNNFT PQR++IRNY+L YL   GP+L  +V TSL+Q+LCR+TK GWFDD+QHRE+VD V +FLQ +
Sbjct:  926 MDAAQLQTLETLCSALYESVHESERAHAQQAVLVLQSSAEYIPQCQYVLDNSTSPYALLVASSSLTKLITTHWNNFTTPQRIDIRNYVLAYLAQKGPTLQKFVTTSLVQMLCRLTKFGWFDDEQHREIVDEVTKFLQAT 1064          
BLAST of mRNA_S-dermatodea_contig13731.2150.1 vs. uniprot
Match: A0A8K1CLU5_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CLU5_PYTOL)

HSP 1 Score: 189 bits (479), Expect = 6.500e-53
Identity = 86/139 (61.87%), Postives = 108/139 (77.70%), Query Frame = 0
Query:    1 MDAVQLGQVEALCETLYNSTDETARGHAQNQLLSLQTSAERIPQCQYILDHSENAYALLLASSSLTRLISNHWNNFTVPQRVEIRNYILNYLGSVGPSLTDYVRTSLIQLLCRITKLGWFDDQQHREVVDAVMRFLQVS 139
            MDA QL  +E LC+ +Y S +E+ R HAQ  +L LQ+SAE IPQCQY+LDHS + YALL+AS+SLT+LI+ HWNNFT PQRV+IRNY+L YL   GP L  YV TSLIQ++CR+TK GWFDD+ HRE+V  V +FLQ +
Sbjct:    1 MDASQLQNLEVLCKAIYESVNESERTHAQQSVLILQSSAEYIPQCQYVLDHSASPYALLVASTSLTKLITTHWNNFTAPQRVDIRNYVLGYLAEKGPKLEKYVTTSLIQMVCRLTKFGWFDDEHHREIVSEVTKFLQAT 139          
BLAST of mRNA_S-dermatodea_contig13731.2150.1 vs. uniprot
Match: D0P208_PHYIT (Exportin-like protein n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0P208_PHYIT)

HSP 1 Score: 186 bits (473), Expect = 8.080e-53
Identity = 86/139 (61.87%), Postives = 110/139 (79.14%), Query Frame = 0
Query:    1 MDAVQLGQVEALCETLYNSTDETARGHAQNQLLSLQTSAERIPQCQYILDHSENAYALLLASSSLTRLISNHWNNFTVPQRVEIRNYILNYLGSVGPSLTDYVRTSLIQLLCRITKLGWFDDQQHREVVDAVMRFLQVS 139
            MDA QL ++E LC  LY S +E  R HAQ  +L LQ+SAE IPQCQY+LD+S + YALL+AS+SLT+LI++HWNNFT PQRV+IRNY+L YL   GP+L  +V TSLIQ++CR+TK GWFDD+QHRE+V  V +FLQ +
Sbjct:    1 MDANQLRELETLCRVLYESGNEVERAHAQQAVLILQSSAEYIPQCQYVLDNSSSPYALLVASTSLTKLITSHWNNFTTPQRVDIRNYVLGYLAQKGPTLEKFVTTSLIQMVCRLTKYGWFDDEQHREIVAEVTKFLQAT 139          
BLAST of mRNA_S-dermatodea_contig13731.2150.1 vs. uniprot
Match: A0A484EDS8_BRELC (Importin N-terminal domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EDS8_BRELC)

HSP 1 Score: 188 bits (477), Expect = 1.220e-52
Identity = 87/139 (62.59%), Postives = 110/139 (79.14%), Query Frame = 0
Query:    1 MDAVQLGQVEALCETLYNSTDETARGHAQNQLLSLQTSAERIPQCQYILDHSENAYALLLASSSLTRLISNHWNNFTVPQRVEIRNYILNYLGSVGPSLTDYVRTSLIQLLCRITKLGWFDDQQHREVVDAVMRFLQVS 139
            MDA QL ++E LC  LY ST+E  R HAQ  +L LQ+SAE IPQCQY+LD+S + YALL+AS+SLT+LI+ HWNNFT PQRV+IRNY+L YL   GP+L  +V TSLIQ++CR+TK GWFDD+QHRE+V  V +FLQ +
Sbjct:    1 MDANQLRELETLCRVLYESTNEVERAHAQQAVLILQSSAEYIPQCQYVLDNSSSPYALLVASNSLTKLITTHWNNFTPPQRVDIRNYVLGYLAQHGPTLEKFVTTSLIQMVCRLTKYGWFDDEQHREIVTEVTKFLQAT 139          
BLAST of mRNA_S-dermatodea_contig13731.2150.1 vs. uniprot
Match: H3GGA7_PHYRM (Importin N-terminal domain-containing protein n=22 Tax=Peronosporaceae TaxID=4777 RepID=H3GGA7_PHYRM)

HSP 1 Score: 187 bits (474), Expect = 3.100e-52
Identity = 86/139 (61.87%), Postives = 111/139 (79.86%), Query Frame = 0
Query:    1 MDAVQLGQVEALCETLYNSTDETARGHAQNQLLSLQTSAERIPQCQYILDHSENAYALLLASSSLTRLISNHWNNFTVPQRVEIRNYILNYLGSVGPSLTDYVRTSLIQLLCRITKLGWFDDQQHREVVDAVMRFLQVS 139
            MDA QL ++E LC  LY S +E+ R HAQ  +L LQ+SAE IPQCQY+LD+S + YALL+AS+SLT+LI++HWNNFT PQRV+IRNY+L YL   GP+L  +V TSLIQ++CR+TK GWFDD+QHRE+V  V +FLQ +
Sbjct:    1 MDANQLRELETLCRVLYESGNESERAHAQQAVLILQSSAEYIPQCQYVLDNSSSPYALLVASTSLTKLITSHWNNFTTPQRVDIRNYVLGYLAQKGPTLEKFVTTSLIQMVCRLTKYGWFDDEQHREIVAEVTKFLQAT 139          
BLAST of mRNA_S-dermatodea_contig13731.2150.1 vs. uniprot
Match: A0A662YJ06_9STRA (Importin N-terminal domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YJ06_9STRA)

HSP 1 Score: 186 bits (471), Expect = 7.900e-52
Identity = 88/143 (61.54%), Postives = 113/143 (79.02%), Query Frame = 0
Query:    1 MDAVQLGQVEALCETLYNSTDETARGHAQNQLLSLQTSAERIPQCQYILDHSENAYALLLASSSLTRLISNHWNNFTVPQRVEIR----NYILNYLGSVGPSLTDYVRTSLIQLLCRITKLGWFDDQQHREVVDAVMRFLQVS 139
            MDA QL Q+E LC+ LY ST+E+ R HAQ  +L LQ+SAE IPQCQY+LD+S + YALL+AS+SLT+LI++HWNNFT PQRV+IR    NY+L YL   GP+L  +V TSLIQ++CR+TK GWFDD+QHRE+V  V +FLQ +
Sbjct:    1 MDAGQLQQLETLCKVLYESTNESERAHAQQAVLILQSSAEYIPQCQYVLDNSTSPYALLVASTSLTKLITSHWNNFTTPQRVDIRTSIGNYVLGYLAQKGPTLEKFVTTSLIQMVCRLTKYGWFDDEQHREIVSEVTKFLQAT 143          
BLAST of mRNA_S-dermatodea_contig13731.2150.1 vs. uniprot
Match: A0A5D6XJM5_9STRA (Importin N-terminal domain-containing protein (Fragment) n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XJM5_9STRA)

HSP 1 Score: 186 bits (471), Expect = 7.920e-52
Identity = 86/139 (61.87%), Postives = 107/139 (76.98%), Query Frame = 0
Query:    1 MDAVQLGQVEALCETLYNSTDETARGHAQNQLLSLQTSAERIPQCQYILDHSENAYALLLASSSLTRLISNHWNNFTVPQRVEIRNYILNYLGSVGPSLTDYVRTSLIQLLCRITKLGWFDDQQHREVVDAVMRFLQVS 139
            MDA QL  +E LC+ LY S  E  R  AQ  +L LQ+SAE IPQCQY+LDHS + YALL+AS+SLT+LI+ HWNNFT PQRV+IRNY+L YL   GP+L  +V TSLIQ++CR+TK GWFDD+QHRE+V  V +FLQ +
Sbjct:    1 MDATQLRNLETLCKVLYESAVEAERARAQQSVLVLQSSAEYIPQCQYVLDHSASPYALLVASNSLTKLITTHWNNFTPPQRVDIRNYVLGYLAQKGPTLEKFVTTSLIQMVCRLTKFGWFDDEQHREIVGEVTKFLQAT 139          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig13731.2150.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L6F7_9PHAE8.470e-7992.81Importin N-terminal domain-containing protein n=2 ... [more]
A0A835YUW2_9STRA2.420e-5567.65RAN binding protein 16-like protein n=1 Tax=Tribon... [more]
A0A7S1USY4_9STRA1.190e-5460.96Hypothetical protein (Fragment) n=1 Tax=Grammatoph... [more]
A0A2D4BKK5_PYTIN2.020e-5362.59Exportin-like protein n=1 Tax=Pythium insidiosum T... [more]
A0A8K1CLU5_PYTOL6.500e-5361.87Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
D0P208_PHYIT8.080e-5361.87Exportin-like protein n=1 Tax=Phytophthora infesta... [more]
A0A484EDS8_BRELC1.220e-5262.59Importin N-terminal domain-containing protein n=1 ... [more]
H3GGA7_PHYRM3.100e-5261.87Importin N-terminal domain-containing protein n=22... [more]
A0A662YJ06_9STRA7.900e-5261.54Importin N-terminal domain-containing protein n=2 ... [more]
A0A5D6XJM5_9STRA7.920e-5261.87Importin N-terminal domain-containing protein (Fra... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001494Importin-beta, N-terminal domainSMARTSM00913IBN_N_2coord: 28..94
e-value: 1.4E-7
score: 41.2
IPR001494Importin-beta, N-terminal domainPFAMPF03810IBN_Ncoord: 28..94
e-value: 6.8E-12
score: 45.1
IPR001494Importin-beta, N-terminal domainPROSITEPS50166IMPORTIN_B_NTcoord: 28..94
score: 11.205
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 2..139
e-value: 9.4E-27
score: 95.8
NoneNo IPR availablePANTHERPTHR12596EXPORTIN 4,7-RELATEDcoord: 6..137
NoneNo IPR availablePANTHERPTHR12596:SF15coord: 6..137
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 1..137

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig13731contigS-dermatodea_contig13731:1953..2369 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig13731.2150.1mRNA_S-dermatodea_contig13731.2150.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig13731 1953..3645 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig13731.2150.1 ID=prot_S-dermatodea_contig13731.2150.1|Name=mRNA_S-dermatodea_contig13731.2150.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=139bp
MDAVQLGQVEALCETLYNSTDETARGHAQNQLLSLQTSAERIPQCQYILD
HSENAYALLLASSSLTRLISNHWNNFTVPQRVEIRNYILNYLGSVGPSLT
DYVRTSLIQLLCRITKLGWFDDQQHREVVDAVMRFLQVS
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001494Importin-beta_N
IPR011989ARM-like
IPR016024ARM-type_fold