mRNA_S-dermatodea_contig13731.2150.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig13731.2150.1 vs. uniprot
Match: A0A6H5L6F7_9PHAE (Importin N-terminal domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L6F7_9PHAE) HSP 1 Score: 261 bits (667), Expect = 1.610e-76 Identity = 129/139 (92.81%), Postives = 132/139 (94.96%), Query Frame = 3
Query: 411 MDAVQLGQVEALCETLYNSTDETARGHAQNQLLSLQTSAERIPQCQYILDHSENAYALLLASSSLTRLISNHWNNFTVPQRVEIRNYILNYLGSVGPSLTDYVRTSLIQLLCRITKLGWFDDQQHREVVDAVMRFLQVS 827
MDA QL QVEALCETLYNSTDE AR HAQNQLLSLQTSAERIPQCQYILDHSENAYALLLASSSLTRLIS+HWNNFT PQRVEIRNYILNYLGSVGP LTDYVRTSLIQLLCRITKLGWFDDQ+HREVVDAVMRFLQ +
Sbjct: 1 MDAAQLVQVEALCETLYNSTDEAARSHAQNQLLSLQTSAERIPQCQYILDHSENAYALLLASSSLTRLISSHWNNFTTPQRVEIRNYILNYLGSVGPGLTDYVRTSLIQLLCRITKLGWFDDQRHREVVDAVMRFLQAT 139
BLAST of mRNA_S-dermatodea_contig13731.2150.1 vs. uniprot
Match: A0A835YUW2_9STRA (RAN binding protein 16-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUW2_9STRA) HSP 1 Score: 197 bits (502), Expect = 7.530e-54 Identity = 93/138 (67.39%), Postives = 116/138 (84.06%), Query Frame = 3
Query: 405 VAMDAVQLGQVEALCETLYNSTDETARGHAQNQLLSLQTSAERIPQCQYILDHSENAYALLLASSSLTRLISNHWNNFTVPQRVEIRNYILNYLGSVGPSLTDYVRTSLIQLLCRITKLGWFDDQQHREVVDAVMRFL 818
+AMDA QL QVE+LC+ LYN+ +E R AQ QL+SLQ+S + IPQCQYILD+S+N YA LLAS+SLT+LI+ HWN+F+VPQRV+IRNYIL+YL S GPSL DYV T+L+QLLCRITKLGWFDD HR++VD ++FL
Sbjct: 1 MAMDAQQLAQVESLCDALYNAANEAQRASAQQQLMSLQSSVDYIPQCQYILDNSQNPYARLLASNSLTQLITQHWNSFSVPQRVDIRNYILSYLASQGPSLKDYVVTALVQLLCRITKLGWFDDAAHRDLVDETLKFL 138
BLAST of mRNA_S-dermatodea_contig13731.2150.1 vs. uniprot
Match: A0A7S1USY4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1USY4_9STRA) HSP 1 Score: 177 bits (449), Expect = 1.490e-52 Identity = 89/146 (60.96%), Postives = 110/146 (75.34%), Query Frame = 3
Query: 411 MDAVQLGQVEALCETLYNSTDETA-------RGHAQNQLLSLQTSAERIPQCQYILDHSENAYALLLASSSLTRLISNHWNNFTVPQRVEIRNYILNYLGSVGPSLTDYVRTSLIQLLCRITKLGWFDDQQHREVVDAVMRFLQVS 827
MDA QL QVEALCETLY+ T+ R AQ +LLSLQ+SAE IPQCQYILD S + YA L+AS+SLT LI+++WN+FTV QR++IRNY+L YL + GP L D+V SLI+L+CRITKLGWFDD HRE+ D V +FLQ +
Sbjct: 1 MDASQLAQVEALCETLYSGAPSTSEDGKPISRADAQARLLSLQSSAEYIPQCQYILDQSNSQYARLVASNSLTELITSYWNSFTVAQRIDIRNYVLGYLANRGPGLQDFVVVSLIKLVCRITKLGWFDDPTHRELADDVTKFLQAT 146
BLAST of mRNA_S-dermatodea_contig13731.2150.1 vs. uniprot
Match: A0A2D4BKK5_PYTIN (Exportin-like protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BKK5_PYTIN) HSP 1 Score: 191 bits (484), Expect = 2.240e-51 Identity = 87/140 (62.14%), Postives = 110/140 (78.57%), Query Frame = 3
Query: 408 AMDAVQLGQVEALCETLYNSTDETARGHAQNQLLSLQTSAERIPQCQYILDHSENAYALLLASSSLTRLISNHWNNFTVPQRVEIRNYILNYLGSVGPSLTDYVRTSLIQLLCRITKLGWFDDQQHREVVDAVMRFLQVS 827
+MDA QL +E LC LY S E+ R HAQ +L LQ+SAE IPQCQY+LD+S + YALL+ASSSLT+LI+ HWNNFT PQR++IRNY+L YL GP+L +V TSL+Q+LCR+TK GWFDD+QHRE+VD V +FLQ +
Sbjct: 925 SMDAAQLQTLETLCSALYESVHESERAHAQQAVLVLQSSAEYIPQCQYVLDNSTSPYALLVASSSLTKLITTHWNNFTTPQRIDIRNYVLAYLAQKGPTLQKFVTTSLVQMLCRLTKFGWFDDEQHREIVDEVTKFLQAT 1064
BLAST of mRNA_S-dermatodea_contig13731.2150.1 vs. uniprot
Match: A0A8K1CLU5_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CLU5_PYTOL) HSP 1 Score: 189 bits (479), Expect = 9.160e-51 Identity = 86/139 (61.87%), Postives = 108/139 (77.70%), Query Frame = 3
Query: 411 MDAVQLGQVEALCETLYNSTDETARGHAQNQLLSLQTSAERIPQCQYILDHSENAYALLLASSSLTRLISNHWNNFTVPQRVEIRNYILNYLGSVGPSLTDYVRTSLIQLLCRITKLGWFDDQQHREVVDAVMRFLQVS 827
MDA QL +E LC+ +Y S +E+ R HAQ +L LQ+SAE IPQCQY+LDHS + YALL+AS+SLT+LI+ HWNNFT PQRV+IRNY+L YL GP L YV TSLIQ++CR+TK GWFDD+ HRE+V V +FLQ +
Sbjct: 1 MDASQLQNLEVLCKAIYESVNESERTHAQQSVLILQSSAEYIPQCQYVLDHSASPYALLVASTSLTKLITTHWNNFTAPQRVDIRNYVLGYLAEKGPKLEKYVTTSLIQMVCRLTKFGWFDDEHHREIVSEVTKFLQAT 139
BLAST of mRNA_S-dermatodea_contig13731.2150.1 vs. uniprot
Match: D0P208_PHYIT (Exportin-like protein n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0P208_PHYIT) HSP 1 Score: 186 bits (473), Expect = 1.090e-50 Identity = 86/139 (61.87%), Postives = 110/139 (79.14%), Query Frame = 3
Query: 411 MDAVQLGQVEALCETLYNSTDETARGHAQNQLLSLQTSAERIPQCQYILDHSENAYALLLASSSLTRLISNHWNNFTVPQRVEIRNYILNYLGSVGPSLTDYVRTSLIQLLCRITKLGWFDDQQHREVVDAVMRFLQVS 827
MDA QL ++E LC LY S +E R HAQ +L LQ+SAE IPQCQY+LD+S + YALL+AS+SLT+LI++HWNNFT PQRV+IRNY+L YL GP+L +V TSLIQ++CR+TK GWFDD+QHRE+V V +FLQ +
Sbjct: 1 MDANQLRELETLCRVLYESGNEVERAHAQQAVLILQSSAEYIPQCQYVLDNSSSPYALLVASTSLTKLITSHWNNFTTPQRVDIRNYVLGYLAQKGPTLEKFVTTSLIQMVCRLTKYGWFDDEQHREIVAEVTKFLQAT 139
BLAST of mRNA_S-dermatodea_contig13731.2150.1 vs. uniprot
Match: A0A484EDS8_BRELC (Importin N-terminal domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EDS8_BRELC) HSP 1 Score: 188 bits (477), Expect = 1.710e-50 Identity = 87/139 (62.59%), Postives = 110/139 (79.14%), Query Frame = 3
Query: 411 MDAVQLGQVEALCETLYNSTDETARGHAQNQLLSLQTSAERIPQCQYILDHSENAYALLLASSSLTRLISNHWNNFTVPQRVEIRNYILNYLGSVGPSLTDYVRTSLIQLLCRITKLGWFDDQQHREVVDAVMRFLQVS 827
MDA QL ++E LC LY ST+E R HAQ +L LQ+SAE IPQCQY+LD+S + YALL+AS+SLT+LI+ HWNNFT PQRV+IRNY+L YL GP+L +V TSLIQ++CR+TK GWFDD+QHRE+V V +FLQ +
Sbjct: 1 MDANQLRELETLCRVLYESTNEVERAHAQQAVLILQSSAEYIPQCQYVLDNSSSPYALLVASNSLTKLITTHWNNFTPPQRVDIRNYVLGYLAQHGPTLEKFVTTSLIQMVCRLTKYGWFDDEQHREIVTEVTKFLQAT 139
BLAST of mRNA_S-dermatodea_contig13731.2150.1 vs. uniprot
Match: H3GGA7_PHYRM (Importin N-terminal domain-containing protein n=22 Tax=Peronosporaceae TaxID=4777 RepID=H3GGA7_PHYRM) HSP 1 Score: 187 bits (474), Expect = 4.320e-50 Identity = 86/139 (61.87%), Postives = 111/139 (79.86%), Query Frame = 3
Query: 411 MDAVQLGQVEALCETLYNSTDETARGHAQNQLLSLQTSAERIPQCQYILDHSENAYALLLASSSLTRLISNHWNNFTVPQRVEIRNYILNYLGSVGPSLTDYVRTSLIQLLCRITKLGWFDDQQHREVVDAVMRFLQVS 827
MDA QL ++E LC LY S +E+ R HAQ +L LQ+SAE IPQCQY+LD+S + YALL+AS+SLT+LI++HWNNFT PQRV+IRNY+L YL GP+L +V TSLIQ++CR+TK GWFDD+QHRE+V V +FLQ +
Sbjct: 1 MDANQLRELETLCRVLYESGNESERAHAQQAVLILQSSAEYIPQCQYVLDNSSSPYALLVASTSLTKLITSHWNNFTTPQRVDIRNYVLGYLAQKGPTLEKFVTTSLIQMVCRLTKYGWFDDEQHREIVAEVTKFLQAT 139
BLAST of mRNA_S-dermatodea_contig13731.2150.1 vs. uniprot
Match: A0A662YJ06_9STRA (Importin N-terminal domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YJ06_9STRA) HSP 1 Score: 186 bits (471), Expect = 1.100e-49 Identity = 88/143 (61.54%), Postives = 113/143 (79.02%), Query Frame = 3
Query: 411 MDAVQLGQVEALCETLYNSTDETARGHAQNQLLSLQTSAERIPQCQYILDHSENAYALLLASSSLTRLISNHWNNFTVPQRVEIR----NYILNYLGSVGPSLTDYVRTSLIQLLCRITKLGWFDDQQHREVVDAVMRFLQVS 827
MDA QL Q+E LC+ LY ST+E+ R HAQ +L LQ+SAE IPQCQY+LD+S + YALL+AS+SLT+LI++HWNNFT PQRV+IR NY+L YL GP+L +V TSLIQ++CR+TK GWFDD+QHRE+V V +FLQ +
Sbjct: 1 MDAGQLQQLETLCKVLYESTNESERAHAQQAVLILQSSAEYIPQCQYVLDNSTSPYALLVASTSLTKLITSHWNNFTTPQRVDIRTSIGNYVLGYLAQKGPTLEKFVTTSLIQMVCRLTKYGWFDDEQHREIVSEVTKFLQAT 143
BLAST of mRNA_S-dermatodea_contig13731.2150.1 vs. uniprot
Match: A0A5D6XJM5_9STRA (Importin N-terminal domain-containing protein (Fragment) n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XJM5_9STRA) HSP 1 Score: 186 bits (471), Expect = 1.100e-49 Identity = 86/139 (61.87%), Postives = 107/139 (76.98%), Query Frame = 3
Query: 411 MDAVQLGQVEALCETLYNSTDETARGHAQNQLLSLQTSAERIPQCQYILDHSENAYALLLASSSLTRLISNHWNNFTVPQRVEIRNYILNYLGSVGPSLTDYVRTSLIQLLCRITKLGWFDDQQHREVVDAVMRFLQVS 827
MDA QL +E LC+ LY S E R AQ +L LQ+SAE IPQCQY+LDHS + YALL+AS+SLT+LI+ HWNNFT PQRV+IRNY+L YL GP+L +V TSLIQ++CR+TK GWFDD+QHRE+V V +FLQ +
Sbjct: 1 MDATQLRNLETLCKVLYESAVEAERARAQQSVLVLQSSAEYIPQCQYVLDHSASPYALLVASNSLTKLITTHWNNFTPPQRVDIRNYVLGYLAQKGPTLEKFVTTSLIQMVCRLTKFGWFDDEQHREIVGEVTKFLQAT 139 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig13731.2150.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig13731.2150.1 >prot_S-dermatodea_contig13731.2150.1 ID=prot_S-dermatodea_contig13731.2150.1|Name=mRNA_S-dermatodea_contig13731.2150.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=139bp MDAVQLGQVEALCETLYNSTDETARGHAQNQLLSLQTSAERIPQCQYILDback to top mRNA from alignment at S-dermatodea_contig13731:1953..3645- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig13731.2150.1 ID=mRNA_S-dermatodea_contig13731.2150.1|Name=mRNA_S-dermatodea_contig13731.2150.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=1693bp|location=Sequence derived from alignment at S-dermatodea_contig13731:1953..3645- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig13731:1953..3645- >mRNA_S-dermatodea_contig13731.2150.1 ID=mRNA_S-dermatodea_contig13731.2150.1|Name=mRNA_S-dermatodea_contig13731.2150.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=834bp|location=Sequence derived from alignment at S-dermatodea_contig13731:1953..3645- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |