prot_S-dermatodea_contig13724.2144.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig13724.2144.1
Unique Nameprot_S-dermatodea_contig13724.2144.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length115
Homology
BLAST of mRNA_S-dermatodea_contig13724.2144.1 vs. uniprot
Match: D8LKX6_ECTSI (Similar to ubiquitin specific protease 48 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKX6_ECTSI)

HSP 1 Score: 139 bits (349), Expect = 8.660e-36
Identity = 73/119 (61.34%), Postives = 85/119 (71.43%), Query Frame = 0
Query:    1 DHVRRKNCSNNPRCLYGLGEGKQGIWSANPGLILVLGEDMSGALKMAPTANSSIDSSSPVSEGGVLEEGASASPTP----SRLPVGLKNLGATCYLNSQLQALFANREFRRGVYAWRPS 115
            DHVR+KNCSNNPRCLYGLGEGK+GIWS  P LI  LGEDMSG +K  P+   S  +++  + G     G +  P P     R P GLKNLGATCYLNSQLQALFAN+ FR GV++WRPS
Sbjct:   14 DHVRKKNCSNNPRCLYGLGEGKEGIWSRKPALIAALGEDMSGMVKELPSE--STRAATAAAGGSSAGPGDAVVPFPPPRMQRQPTGLKNLGATCYLNSQLQALFANKAFRDGVFSWRPS 130          
BLAST of mRNA_S-dermatodea_contig13724.2144.1 vs. uniprot
Match: A0A5D6XMC9_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XMC9_9STRA)

HSP 1 Score: 88.6 bits (218), Expect = 4.010e-18
Identity = 58/127 (45.67%), Postives = 71/127 (55.91%), Query Frame = 0
Query:    1 DHVRRK--------NCSNNPRCLYGLGEGKQGIWSANPGLIL-VLGEDMSGALKM----APTANSSIDSSSPVSEGGVLEEGASASPTPSRLPVGLKNLGATCYLNSQLQALFANREFRRGVYAWRP 114
            DH R+K        NC+ NP CL+GLGE ++G+W A P L+  +LG+D    L+     AP   +S  SSSP +E G            S LP GL+NLGATCYLNS LQ LF N  FR  VY W P
Sbjct:   44 DHHRKKSKSAAALRNCAENPNCLFGLGEHQEGVW-AKPKLVQRLLGDDPREQLRAVYPDAPRRKNSA-SSSPAAESGA-----------SLLPCGLRNLGATCYLNSMLQTLFTNVAFREAVYRWEP 157          
BLAST of mRNA_S-dermatodea_contig13724.2144.1 vs. uniprot
Match: A0A024U320_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U320_9STRA)

HSP 1 Score: 85.5 bits (210), Expect = 4.770e-17
Identity = 48/110 (43.64%), Postives = 60/110 (54.55%), Query Frame = 0
Query:    5 RKNCSNNPRCLYGLGEGKQGIWSANPGLILVLGEDMSGALKMAPTANSSIDSSSPVSEGGVLEEGASASPTPSRLPVGLKNLGATCYLNSQLQALFANREFRRGVYAWRP 114
            R+NC +NP CL+GLGE   GIW  NP ++  LG D S  L+            SPVSE    E+  +        P GL+NLGATCY+NS +Q LF    FRR V+ W P
Sbjct:   67 RRNCQDNPNCLFGLGEYADGIWKTNPSVLADLGPDPSTMLR------------SPVSE----EDTNNNHDENGARPCGLRNLGATCYVNSMVQCLFMTMSFRRAVHEWEP 160          
BLAST of mRNA_S-dermatodea_contig13724.2144.1 vs. uniprot
Match: A0A3R7JRC3_9STRA (USP domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7JRC3_9STRA)

HSP 1 Score: 85.1 bits (209), Expect = 4.770e-17
Identity = 49/122 (40.16%), Postives = 62/122 (50.82%), Query Frame = 0
Query:    1 DHVRRK--------NCSNNPRCLYGLGEGKQGIWSANPGLILVLGEDMSGALKMAPTANSSIDSSSPVSEGGVLEEGASASPTPSRLPVGLKNLGATCYLNSQLQALFANREFRRGVYAWRP 114
            DH R+K        NC++NP CLYGLGE ++G+W AN  +  V G+D     +                  G  + G        ++P GL+NLGATCYLNS LQ LF N  FRR VY W P
Sbjct:   35 DHHRKKGKTVNVLRNCADNPNCLYGLGERQKGVWQANKLIRRVFGDDPRERRR------------------GFAKSGG-------KMPCGLRNLGATCYLNSMLQCLFVNLPFRRAVYEWEP 131          
BLAST of mRNA_S-dermatodea_contig13724.2144.1 vs. uniprot
Match: A0A3F2RYI8_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RYI8_9STRA)

HSP 1 Score: 85.1 bits (209), Expect = 6.490e-17
Identity = 49/122 (40.16%), Postives = 62/122 (50.82%), Query Frame = 0
Query:    1 DHVRRK--------NCSNNPRCLYGLGEGKQGIWSANPGLILVLGEDMSGALKMAPTANSSIDSSSPVSEGGVLEEGASASPTPSRLPVGLKNLGATCYLNSQLQALFANREFRRGVYAWRP 114
            DH R+K        NC++NP CLYGLGE ++G+W AN  +  V G+D     +                  G  + G        ++P GL+NLGATCYLNS LQ LF N  FRR VY W P
Sbjct:   35 DHHRKKGKAANVLRNCADNPNCLYGLGERQKGVWQANKLIRRVFGDDPRERRR------------------GFAKSGG-------KMPCGLRNLGATCYLNSMLQCLFVNLPFRRAVYEWEP 131          
BLAST of mRNA_S-dermatodea_contig13724.2144.1 vs. uniprot
Match: A0A2D4BF54_PYTIN (Ubiquitin-specific protease, putative n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BF54_PYTIN)

HSP 1 Score: 83.6 bits (205), Expect = 2.270e-16
Identity = 50/114 (43.86%), Postives = 59/114 (51.75%), Query Frame = 0
Query:    2 HVRRKNCSNNPRCLYGLGEGKQGIWSANPGLILVLGEDMSGALKMAPTANSSIDSSSPVSEGGVLEEGASASPTPSRLPVGLKNLGATCYLNSQLQALFANREFRRGVYAWRPS 115
            HV RKNC  NP CL+GLGE  +G+W     L  VLGED     +    ++              LE G      P   P GL+NLGATCYLNS LQ LF N  FRR V+ W P+
Sbjct:   51 HV-RKNCEANPNCLFGLGEYSKGVWQGAKLLRRVLGEDPRDLQRSFSVSS--------------LENG---DDXPRLAPCGLRNLGATCYLNSMLQCLFVNVPFRRAVFEWEPT 146          
BLAST of mRNA_S-dermatodea_contig13724.2144.1 vs. uniprot
Match: A0A1V9ZY32_9STRA (Ubiquitin carboxyl-terminal hydrolase (Fragment) n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZY32_9STRA)

HSP 1 Score: 82.8 bits (203), Expect = 4.180e-16
Identity = 45/109 (41.28%), Postives = 56/109 (51.38%), Query Frame = 0
Query:    7 NCSNNPRCLYGLGEGKQGIWSANPGLILVLGEDMSGALKMAPTANSSIDSSSPVSEGGVLEEGASASPTPSRLPVGLKNLGATCYLNSQLQALFANREFRRGVYAWRPS 115
            NCS NP CLYGLGE  +GIW + P L+  LGED S +++       S                          P GL+NLGATCY+NS +Q LF +  FRR V+ W PS
Sbjct:   45 NCSENPNCLYGLGEYTEGIWKSVPELLKALGEDPSLSIRTEINQEKST-------------------------PCGLRNLGATCYVNSMVQVLFMDLAFRRAVHEWEPS 128          
BLAST of mRNA_S-dermatodea_contig13724.2144.1 vs. uniprot
Match: A0A6A3WD98_9STRA (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3WD98_9STRA)

HSP 1 Score: 82.0 bits (201), Expect = 7.910e-16
Identity = 51/122 (41.80%), Postives = 60/122 (49.18%), Query Frame = 0
Query:    1 DHVRRK--------NCSNNPRCLYGLGEGKQGIWSANPGLILVLGEDMSGALKMAPTANSSIDSSSPVSEGGVLEEGASASPTPSRLPVGLKNLGATCYLNSQLQALFANREFRRGVYAWRP 114
            DH RR+        NC++NP CLYGLGE ++G+W     L+ V G D        P A                  G +  PT    P GL+NLGATCYLNS LQ LF N  FRR VY W P
Sbjct:   33 DHHRRRGKAASALRNCADNPNCLYGLGERQKGVWRRESLLLRVFGPD--------PRARR-------------RGSGRAGRPT----PCGLRNLGATCYLNSMLQCLFVNLPFRRAVYEWEP 129          
BLAST of mRNA_S-dermatodea_contig13724.2144.1 vs. uniprot
Match: A0A662X1Q3_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X1Q3_9STRA)

HSP 1 Score: 82.0 bits (201), Expect = 8.000e-16
Identity = 50/123 (40.65%), Postives = 61/123 (49.59%), Query Frame = 0
Query:    1 DHVRRK---------NCSNNPRCLYGLGEGKQGIWSANPGLILVLGEDMSGALKMAPTANSSIDSSSPVSEGGVLEEGASASPTPSRLPVGLKNLGATCYLNSQLQALFANREFRRGVYAWRP 114
            DH R+K         NC +NP CL+GLGE ++GIW +   +  V G+D     +              V+  GVL            LP GL+NLGATCYLNS LQ LF N  FRR VY W P
Sbjct:  383 DHHRKKSKAAAGVLRNCESNPNCLFGLGERQKGIWQSKQLIRRVFGDDPRERQRS-------------VARDGVL------------LPCGLRNLGATCYLNSMLQCLFVNLPFRRAVYEWEP 480          
BLAST of mRNA_S-dermatodea_contig13724.2144.1 vs. uniprot
Match: T0S3W8_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0S3W8_SAPDV)

HSP 1 Score: 81.6 bits (200), Expect = 1.060e-15
Identity = 43/109 (39.45%), Postives = 61/109 (55.96%), Query Frame = 0
Query:    7 NCSNNPRCLYGLGEGKQGIWSANPGLILVLGEDMSGALKMAPTANSSIDSSSPVSEGGVLEEGASASPTPSRLPVGLKNLGATCYLNSQLQALFANREFRRGVYAWRPS 115
            NCS NP C++GLGE  +GIW  +P ++  LG++ S A++                   V E+G S        P GL+NLGATCY+NS +Q LF +  FRR V+ W+P+
Sbjct:   51 NCSENPNCIFGLGEYMEGIWKTHPAVLDALGDNPSLAVRTR-----------------VTEDGPST-------PCGLRNLGATCYVNSMVQVLFMDLAFRRAVHEWKPN 135          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig13724.2144.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LKX6_ECTSI8.660e-3661.34Similar to ubiquitin specific protease 48 n=1 Tax=... [more]
A0A5D6XMC9_9STRA4.010e-1845.67Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A024U320_9STRA4.770e-1743.64Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]
A0A3R7JRC3_9STRA4.770e-1740.16USP domain-containing protein n=3 Tax=Phytophthora... [more]
A0A3F2RYI8_9STRA6.490e-1740.16Uncharacterized protein n=3 Tax=Phytophthora kerno... [more]
A0A2D4BF54_PYTIN2.270e-1643.86Ubiquitin-specific protease, putative n=1 Tax=Pyth... [more]
A0A1V9ZY32_9STRA4.180e-1641.28Ubiquitin carboxyl-terminal hydrolase (Fragment) n... [more]
A0A6A3WD98_9STRA7.910e-1641.80Uncharacterized protein n=4 Tax=Phytophthora TaxID... [more]
A0A662X1Q3_9STRA8.000e-1640.65Uncharacterized protein n=1 Tax=Nothophytophthora ... [more]
T0S3W8_SAPDV1.060e-1539.45Uncharacterized protein n=1 Tax=Saprolegnia diclin... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001394Peptidase C19, ubiquitin carboxyl-terminal hydrolasePFAMPF00443UCHcoord: 81..111
e-value: 1.3E-7
score: 31.4
NoneNo IPR availableGENE3D3.90.70.10coord: 71..115
e-value: 4.8E-11
score: 44.1
IPR018200Ubiquitin specific protease, conserved sitePROSITEPS00972USP_1coord: 82..97
IPR028889Ubiquitin specific protease domainPROSITEPS50235USP_3coord: 81..115
score: 12.351
IPR038765Papain-like cysteine peptidase superfamilySUPERFAMILY54001Cysteine proteinasescoord: 79..113

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig13724contigS-dermatodea_contig13724:4279..4885 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig13724.2144.1mRNA_S-dermatodea_contig13724.2144.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig13724 4279..4885 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig13724.2144.1 ID=prot_S-dermatodea_contig13724.2144.1|Name=mRNA_S-dermatodea_contig13724.2144.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=115bp
DHVRRKNCSNNPRCLYGLGEGKQGIWSANPGLILVLGEDMSGALKMAPTA
NSSIDSSSPVSEGGVLEEGASASPTPSRLPVGLKNLGATCYLNSQLQALF
ANREFRRGVYAWRPS
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001394Peptidase_C19_UCH
IPR018200USP_CS
IPR028889USP_dom
IPR038765Papain-like_cys_pep_sf