prot_S-dermatodea_contig13623.2099.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig13623.2099.1
Unique Nameprot_S-dermatodea_contig13623.2099.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length238
Homology
BLAST of mRNA_S-dermatodea_contig13623.2099.1 vs. uniprot
Match: A0A6H5KI28_9PHAE (EngB-type G domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KI28_9PHAE)

HSP 1 Score: 319 bits (818), Expect = 9.900e-108
Identity = 162/241 (67.22%), Postives = 188/241 (78.01%), Query Frame = 0
Query:    1 MRSPAALRQLTGQLAVATRSPWVWVVQGVDPESALAVPRTRT--SLRPEYVAPASLKHELPTAGRPELAFAGRSNAGKSTLIGELLGNSKLVRTSKAPGCTKTVNFFALRDGG-DIPQSYLVDLPGYGFARQNKRAVRQWTGVVNGYLEGRPPTVLRRTFVLVDSRHGLQPGDEHMLSVLDGANVLNQVVLTKVDKVSPHDLLRSIEGVCQAILAHPASVPVVHCVSAHKGLGMEELANTV 238
            MRS AA R+L GQL+VAT SPWVWV  GVDP SA+  P  +   SLR EYV+PAS  HELPTAG PE+AF GRSN GKSTL+G+LLGN KLVR SKAPGCTKTVN+FALR+GG + PQ++LVDLPGYGFAR++KRAVR W   V  YLEGR  +VLRRTFVLVD RHGLQP DE MLS L   +V N VVLTKVDK SP  L++S+EG  Q  + HPA++P+VHC+SAHKG GM E  NT+
Sbjct:    1 MRSSAAFRRLRGQLSVATSSPWVWVATGVDPASAIHPPPRKRGLSLRGEYVSPASFNHELPTAGTPEVAFIGRSNQGKSTLVGKLLGNPKLVRASKAPGCTKTVNYFALREGGAESPQAFLVDLPGYGFARESKRAVRGWNQAVGSYLEGRSSSVLRRTFVLVDGRHGLQPDDEQMLSFLSSRDVENMVVLTKVDKASPAQLVQSLEGAFQLAVHHPATLPIVHCISAHKGQGMGEFQNTL 241          
BLAST of mRNA_S-dermatodea_contig13623.2099.1 vs. uniprot
Match: A0A835YYM3_9STRA (YihA2, YihA/EngB-like GTPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYM3_9STRA)

HSP 1 Score: 207 bits (526), Expect = 2.550e-63
Identity = 106/234 (45.30%), Postives = 153/234 (65.38%), Query Frame = 0
Query:   18 TRSPWVWVVQGVDPESALA-----VPRTRTSLRPEYVAPASLKHELPTAGRPELAFAGRSNAGKSTLIGELLGNSKLVRTSKAPGCTKTVNFFAL------RDGGDIPQS--YLVDLPGYGFARQNKRAVRQWTGVVNGYLEGRPPTVLRRTFVLVDSRHGLQPGDEHMLSVLDGANVLNQVVLTKVDKVSPHDLLRSIEGVCQAILAHPASVPVVHCVSAHKGLGMEELANTV 238
            T+SPWVW ++G+D +SA+      + R   +++  +  P   K +LP AG PE+AF GRSN GKSTL+G L+ N+KLVR SK PGCT+TVN+F L      + G ++ ++  Y+VDLPGYGFA+   + V+ WT  V G++  R   +LRRTFVL+D RHG++  DE M+++LD   V  Q+VLTK D+++  D+   +EGV +A   H A  PVVH VSA  G G+ +L +T+
Sbjct:    3 TKSPWVWTMKGMDADSAVHRTDPDIARGCRAMQAGFFPPNLFKFDLPKAGVPEVAFCGRSNVGKSTLVGTLINNTKLVRASKEPGCTRTVNYFGLTAPTRIKKGSEVDRAAVYMVDLPGYGFAKAPVQEVQAWTAAVEGFIVNRDCALLRRTFVLIDGRHGVKQHDEDMMTLLDDHGVSYQIVLTKADQLTKRDIAVVVEGVMRAAARHAACYPVVHVVSARDGHGVLQLLDTI 236          
BLAST of mRNA_S-dermatodea_contig13623.2099.1 vs. uniprot
Match: A0A482SLS6_9ARCH (Probable GTP-binding protein EngB n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SLS6_9ARCH)

HSP 1 Score: 176 bits (445), Expect = 7.380e-51
Identity = 93/196 (47.45%), Postives = 129/196 (65.82%), Query Frame = 0
Query:   43 SLRPEYVAPASLKHELPTAGRPELAFAGRSNAGKSTLIGELLGNSKLVRTSKAPGCTKTVNFFALRDGG--DIPQSYLVDLPGYGFARQNKRAVRQWTGVVNGYLEGRPPTVLRRTFVLVDSRHGLQPGDEHMLSVLDGANVLNQVVLTKVDKVSPHDLLRSIEGVCQAILA--HPASVPVVHCVSAHKGLGMEEL 234
            SL P Y+ P+   H+LP+AGRPE+AF GRSN GKS+L+  LLG   L+R SK PGCT T+N++AL  G   D    YL+D+PGYGFA+  K+  ++W  +VN YL  R   +LRR FVL+DSR G+Q  D  M+ +L+ A++  QVVLTK D VS  ++   +  +   I    + + +P+VH VSA KGLG+E+L
Sbjct:   70 SLNPTYIPPSYFNHQLPSAGRPEVAFVGRSNVGKSSLVEALLGTKGLLRISKEPGCTTTLNYYALAKGSALDDHACYLIDMPGYGFAKIAKQQQKKWLEIVNSYLMNRDQLLLRRVFVLIDSRRGVQMQDVEMMEMLNHAHIPYQVVLTKKDLVSDKEIKEKLFELFCVISRKKNNSCLPLVHVVSALKGLGLEDL 265          
BLAST of mRNA_S-dermatodea_contig13623.2099.1 vs. uniprot
Match: A0A1I7NU75_9HYPH (Probable GTP-binding protein EngB n=4 Tax=Hyphomicrobium TaxID=81 RepID=A0A1I7NU75_9HYPH)

HSP 1 Score: 167 bits (422), Expect = 4.060e-48
Identity = 89/181 (49.17%), Postives = 116/181 (64.09%), Query Frame = 0
Query:   58 LPTAGRPELAFAGRSNAGKSTLIGELLGNSKLVRTSKAPGCTKTVNFFALRDGGDIPQSYLVDLPGYGFARQNKRAVRQWTGVVNGYLEGRPPTVLRRTFVLVDSRHGLQPGDEHMLSVLDGANVLNQVVLTKVDKVSPHDLLRSIEGVCQAILAHPASVPVVHCVSAHKGLGMEELANTV 238
            LP   RPE+AFAGRSN GKS+LI  L+G  +L R S  PG T+ +NFF   +  D+   +LVD+PGYGFA   K  V  W  V+  YL GR    L R F+L+D+RHGL+P D+ +L +LDGA V  QVVLTK DK+ P DL + +E   +A+  HPA+ P +   S+ KGLG EEL  T+
Sbjct:   35 LPPDDRPEIAFAGRSNVGKSSLINALVGQLRLARASNTPGRTQELNFFTDPER-DL---FLVDMPGYGFAEAPKEKVAAWNKVIRAYLAGR--RTLLRVFLLIDARHGLKPPDDEILDLLDGAAVSYQVVLTKADKIKPTDLEKVMERTLKALAKHPAAFPAIIATSSEKGLGFEELRGTI 209          
BLAST of mRNA_S-dermatodea_contig13623.2099.1 vs. uniprot
Match: A0A2D4VJ02_9HYPH (Probable GTP-binding protein EngB n=2 Tax=Parvibaculum TaxID=256616 RepID=A0A2D4VJ02_9HYPH)

HSP 1 Score: 165 bits (418), Expect = 6.790e-48
Identity = 89/171 (52.05%), Postives = 110/171 (64.33%), Query Frame = 0
Query:   64 PELAFAGRSNAGKSTLIGELLGNSKLVRTSKAPGCTKTVNFFALRDGGDIPQSYLVDLPGYGFARQNKRAVRQWTGVVNGYLEGRPPTVLRRTFVLVDSRHGLQPGDEHMLSVLDGANVLNQVVLTKVDKVSPHDLLRSIEGVCQAILAHPASVPVVHCVSAHKGLGMEEL 234
            PE AFAGRSN GKS+L+  L G   L RTS  PG TK +NFFAL          LVDLPGYG+AR+ K  V QWT ++  YL GRP   LRR FVLVDSRHGL+  D  ++S+LD   V  Q+VLTK+DK+  ++L   IE +   +  HPAS PV+H  S+ KG G+ EL
Sbjct:    2 PEGAFAGRSNVGKSSLVNALTGRKTLARTSNTPGRTKELNFFALGPAAGAAL-ILVDLPGYGYARETKSRVAQWTALIIDYLRGRPE--LRRVFVLVDSRHGLKDSDRDVMSMLDEVAVSYQIVLTKIDKLKKNELESRIEEIRAELKKHPASHPVIHATSSEKGTGIAEL 169          
BLAST of mRNA_S-dermatodea_contig13623.2099.1 vs. uniprot
Match: A0A1G7WQA0_9PROT (Probable GTP-binding protein EngB n=1 Tax=Roseospirillum parvum TaxID=83401 RepID=A0A1G7WQA0_9PROT)

HSP 1 Score: 165 bits (418), Expect = 1.680e-47
Identity = 94/209 (44.98%), Postives = 125/209 (59.81%), Query Frame = 0
Query:   30 DPESALAVPRTRTSLRPEYVAPASLKHELPTAGRPELAFAGRSNAGKSTLIGELLGNSKLVRTSKAPGCTKTVNFFALRDGGDIPQSYLVDLPGYGFARQNKRAVRQWTGVVNGYLEGRPPTVLRRTFVLVDSRHGLQPGDEHMLSVLDGANVLNQVVLTKVDKVSPHDLLRSIEGVCQAILAHPASVPVVHCVSAHKGLGMEELANTV 238
            D  + L V R   +    +V  A+   +LP AG PE+AF GRSN GKS+LI  L G++ L RTS  PG T+ +NFF L   G +    LVDLPGYG+A+  K+ V  W G++  YL+GR P  LRRT VL+D+RHGL+  D  M+ +LD A V  Q VLTK DK+ P  L   ++   Q +  HPA+ P +   SA KG G+ EL  T+
Sbjct:   11 DAAARLEVGRRLFAAPCTFVRGATKNADLPPAGPPEVAFIGRSNVGKSSLINALTGHNGLARTSVTPGRTQQINFFDL--AGRLT---LVDLPGYGYAKAPKKLVESWNGLIRNYLKGRAP--LRRTLVLIDARHGLKDSDHAMMDLLDKAAVNYQAVLTKADKIGPTSLATRLKDTAQQLARHPAAHPEIAATSAEKGTGIAELRATL 212          
BLAST of mRNA_S-dermatodea_contig13623.2099.1 vs. uniprot
Match: A0A101W6L7_9PROT (Probable GTP-binding protein EngB n=1 Tax=Alphaproteobacteria bacterium BRH_c36 TaxID=1734406 RepID=A0A101W6L7_9PROT)

HSP 1 Score: 164 bits (416), Expect = 2.560e-47
Identity = 88/181 (48.62%), Postives = 113/181 (62.43%), Query Frame = 0
Query:   58 LPTAGRPELAFAGRSNAGKSTLIGELLGNSKLVRTSKAPGCTKTVNFFALRDGGDIPQSYLVDLPGYGFARQNKRAVRQWTGVVNGYLEGRPPTVLRRTFVLVDSRHGLQPGDEHMLSVLDGANVLNQVVLTKVDKVSPHDLLRSIEGVCQAILAHPASVPVVHCVSAHKGLGMEELANTV 238
            LP A R E+AFAGRSN GKS+LI  LL    L RTS  PG T+ +N FA   G   P+ YL DLPGYGFA+  K  V  WT +V  YL GRP   L+R F+L+DSRHG++P D  ++ +LD + V  QVVLTK+DK+    +   +    +AI  HPA+ P V  VS+ KG G+ EL  T+
Sbjct:   24 LPDADRAEIAFAGRSNVGKSSLINALLRQGGLARTSNTPGRTQELNVFAPAAGEQAPEVYLFDLPGYGFAKAPKDKVDTWTSLVKDYLRGRP--TLKRVFLLIDSRHGIKPVDREIMEMLDISAVSYQVVLTKIDKIKVPQIEALLAATTEAIKKHPAAYPAVIAVSSLKGTGLAELRGTL 202          
BLAST of mRNA_S-dermatodea_contig13623.2099.1 vs. uniprot
Match: A0A2W4PIV6_9PROT (Probable GTP-binding protein EngB n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A2W4PIV6_9PROT)

HSP 1 Score: 164 bits (414), Expect = 6.130e-47
Identity = 89/185 (48.11%), Postives = 113/185 (61.08%), Query Frame = 0
Query:   58 LPTAGRPELAFAGRSNAGKSTLIGELLGNSKLVRTSKAPGCTKTVNFFA----LRDGGDIPQSYLVDLPGYGFARQNKRAVRQWTGVVNGYLEGRPPTVLRRTFVLVDSRHGLQPGDEHMLSVLDGANVLNQVVLTKVDKVSPHDLLRSIEGVCQAILAHPASVPVVHCVSAHKGLGMEELANTV 238
            LP AG PE+AFAGRSN GKS+LI  L G   L RTS  PG T+ +N+F       +G D+P   LVD+PGYG+A+  K  V QWT +V  YL GRP   L+R +VL+D+RHG++  DE + S+LD A V  Q+VLTK DK+    L R IE     I   PA+ P V   S+  G G+EEL   V
Sbjct:   28 LPPAGPPEIAFAGRSNVGKSSLINALTGQKGLARTSGTPGRTQELNYFVPGGFSGEGADLPPMALVDMPGYGYAKAPKEQVEQWTRLVFDYLRGRP--TLKRVYVLIDARHGVKSNDEEVFSLLDKAAVSYQLVLTKTDKIKAPGLARMIEETMARIRKRPAAFPAVLATSSETGTGLEELREAV 210          
BLAST of mRNA_S-dermatodea_contig13623.2099.1 vs. uniprot
Match: A0A6I3KII9_9HYPH (Probable GTP-binding protein EngB n=1 Tax=Hyphomicrobium album TaxID=2665159 RepID=A0A6I3KII9_9HYPH)

HSP 1 Score: 163 bits (412), Expect = 1.160e-46
Identity = 87/181 (48.07%), Postives = 113/181 (62.43%), Query Frame = 0
Query:   58 LPTAGRPELAFAGRSNAGKSTLIGELLGNSKLVRTSKAPGCTKTVNFFALRDGGDIPQSYLVDLPGYGFARQNKRAVRQWTGVVNGYLEGRPPTVLRRTFVLVDSRHGLQPGDEHMLSVLDGANVLNQVVLTKVDKVSPHDLLRSIEGVCQAILAHPASVPVVHCVSAHKGLGMEELANTV 238
            LP A RPE+AFAGRSN GKS+LI  L+    L RTS  PG T+ +N+F      D    ++VD+PGYG+A+     V  W  +V  YL GR  T L R F+L+D+RHGL+P D+ +  +LD A V  QVVLTK DK+ PH+L    E   +AI  HPA+ P V   SA KGLG++EL  T+
Sbjct:   32 LPPADRPEIAFAGRSNVGKSSLINALVRQGGLARTSNTPGRTQELNYFR----SDADPLFIVDMPGYGYAKAPVDKVAAWGELVTDYLRGR--TTLARVFLLIDARHGLKPTDQQVADILDEAAVTYQVVLTKADKIKPHELEAVTEATAKAIAKHPAAFPHVIVTSAEKGLGVDELRATI 206          
BLAST of mRNA_S-dermatodea_contig13623.2099.1 vs. uniprot
Match: G2IIN0_SPHSK (Probable GTP-binding protein EngB n=2 Tax=unclassified Sphingobium TaxID=2611147 RepID=G2IIN0_SPHSK)

HSP 1 Score: 162 bits (411), Expect = 1.590e-46
Identity = 93/181 (51.38%), Postives = 115/181 (63.54%), Query Frame = 0
Query:   58 LPTAGRPELAFAGRSNAGKSTLIGELLGNSKLVRTSKAPGCTKTVNFFALRDGGDIPQSYLVDLPGYGFARQNKRAVRQWTGVVNGYLEGRPPTVLRRTFVLVDSRHGLQPGDEHMLSVLDGANVLNQVVLTKVDKVSPHDLLRSIEGVCQAILAHPASVPVVHCVSAHKGLGMEELANTV 238
            LP A  PE+AFAGRSN GKS+LI  L G + L RTS  PG T+ +NFF   D G   +  LVD+PGYG+A+  K  V+QW  +VN YL GRP  VL+RT VL+DSRHGL+  DE +L +LD A V  +VVLTK DKV   DL   IE    A+   PA+ P +   S+ KG+GM EL   V
Sbjct:   33 LPDADVPEVAFAGRSNVGKSSLINALTGRNALARTSNTPGRTQELNFF---DVGSPLRFRLVDMPGYGYAKAPKDVVKQWRFLVNDYLRGRP--VLKRTHVLIDSRHGLKDVDETLLDMLDEAAVSYRVVLTKADKVKASDLAAVIERTAAAMRKRPAAHPQIIATSSEKGMGMAELRAAV 208          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig13623.2099.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KI28_9PHAE9.900e-10867.22EngB-type G domain-containing protein n=2 Tax=Ecto... [more]
A0A835YYM3_9STRA2.550e-6345.30YihA2, YihA/EngB-like GTPase n=1 Tax=Tribonema min... [more]
A0A482SLS6_9ARCH7.380e-5147.45Probable GTP-binding protein EngB n=1 Tax=archaeon... [more]
A0A1I7NU75_9HYPH4.060e-4849.17Probable GTP-binding protein EngB n=4 Tax=Hyphomic... [more]
A0A2D4VJ02_9HYPH6.790e-4852.05Probable GTP-binding protein EngB n=2 Tax=Parvibac... [more]
A0A1G7WQA0_9PROT1.680e-4744.98Probable GTP-binding protein EngB n=1 Tax=Roseospi... [more]
A0A101W6L7_9PROT2.560e-4748.62Probable GTP-binding protein EngB n=1 Tax=Alphapro... [more]
A0A2W4PIV6_9PROT6.130e-4748.11Probable GTP-binding protein EngB n=1 Tax=Proteoba... [more]
A0A6I3KII9_9HYPH1.160e-4648.07Probable GTP-binding protein EngB n=1 Tax=Hyphomic... [more]
G2IIN0_SPHSK1.590e-4651.38Probable GTP-binding protein EngB n=2 Tax=unclassi... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 42..238
e-value: 7.1E-41
score: 141.8
NoneNo IPR availablePANTHERPTHR11649MSS1/TRME-RELATED GTP-BINDING PROTEINcoord: 45..236
NoneNo IPR availablePANTHERPTHR11649:SF13GTP-BINDING PROTEIN ENGB-RELATEDcoord: 45..236
IPR006073GTP binding domainPFAMPF01926MMR_HSR1coord: 66..182
e-value: 2.2E-15
score: 56.7
IPR019987GTP-binding protein, ribosome biogenesis, YsxCTIGRFAMTIGR03598TIGR03598coord: 47..237
e-value: 2.9E-49
score: 165.2
IPR019987GTP-binding protein, ribosome biogenesis, YsxCHAMAPMF_00321GTPase_EngBcoord: 53..238
score: 21.067
IPR030393EngB-type guanine nucleotide-binding (G) domainPROSITEPS51706G_ENGBcoord: 62..238
score: 36.555
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 62..236

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig13623contigS-dermatodea_contig13623:4829..5542 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig13623.2099.1mRNA_S-dermatodea_contig13623.2099.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig13623 4829..5542 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig13623.2099.1 ID=prot_S-dermatodea_contig13623.2099.1|Name=mRNA_S-dermatodea_contig13623.2099.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=238bp
MRSPAALRQLTGQLAVATRSPWVWVVQGVDPESALAVPRTRTSLRPEYVA
PASLKHELPTAGRPELAFAGRSNAGKSTLIGELLGNSKLVRTSKAPGCTK
TVNFFALRDGGDIPQSYLVDLPGYGFARQNKRAVRQWTGVVNGYLEGRPP
TVLRRTFVLVDSRHGLQPGDEHMLSVLDGANVLNQVVLTKVDKVSPHDLL
RSIEGVCQAILAHPASVPVVHCVSAHKGLGMEELANTV
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006073GTP_binding_domain
IPR019987GTP-bd_ribosome_bio_YsxC
IPR030393G_ENGB_dom
IPR027417P-loop_NTPase