mRNA_S-dermatodea_contig13623.2099.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig13623.2099.1 vs. uniprot
Match: A0A6H5KI28_9PHAE (EngB-type G domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KI28_9PHAE) HSP 1 Score: 319 bits (818), Expect = 9.900e-108 Identity = 162/241 (67.22%), Postives = 188/241 (78.01%), Query Frame = 1
Query: 1 MRSPAALRQLTGQLAVATRSPWVWVVQGVDPESALAVPRTRT--SLRPEYVAPASLKHELPTAGRPELAFAGRSNAGKSTLIGELLGNSKLVRTSKAPGCTKTVNFFALRDGG-DIPQSYLVDLPGYGFARQNKRAVRQWTGVVNGYLEGRPPTVLRRTFVLVDSRHGLQPGDEHMLSVLDGANVLNQVVLTKVDKVSPHDLLRSIEGVCQAILAHPASVPVVHCVSAHKGLGMEELANTV 714
MRS AA R+L GQL+VAT SPWVWV GVDP SA+ P + SLR EYV+PAS HELPTAG PE+AF GRSN GKSTL+G+LLGN KLVR SKAPGCTKTVN+FALR+GG + PQ++LVDLPGYGFAR++KRAVR W V YLEGR +VLRRTFVLVD RHGLQP DE MLS L +V N VVLTKVDK SP L++S+EG Q + HPA++P+VHC+SAHKG GM E NT+
Sbjct: 1 MRSSAAFRRLRGQLSVATSSPWVWVATGVDPASAIHPPPRKRGLSLRGEYVSPASFNHELPTAGTPEVAFIGRSNQGKSTLVGKLLGNPKLVRASKAPGCTKTVNYFALREGGAESPQAFLVDLPGYGFARESKRAVRGWNQAVGSYLEGRSSSVLRRTFVLVDGRHGLQPDDEQMLSFLSSRDVENMVVLTKVDKASPAQLVQSLEGAFQLAVHHPATLPIVHCISAHKGQGMGEFQNTL 241
BLAST of mRNA_S-dermatodea_contig13623.2099.1 vs. uniprot
Match: A0A835YYM3_9STRA (YihA2, YihA/EngB-like GTPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYM3_9STRA) HSP 1 Score: 207 bits (526), Expect = 2.550e-63 Identity = 106/234 (45.30%), Postives = 153/234 (65.38%), Query Frame = 1
Query: 52 TRSPWVWVVQGVDPESALA-----VPRTRTSLRPEYVAPASLKHELPTAGRPELAFAGRSNAGKSTLIGELLGNSKLVRTSKAPGCTKTVNFFAL------RDGGDIPQS--YLVDLPGYGFARQNKRAVRQWTGVVNGYLEGRPPTVLRRTFVLVDSRHGLQPGDEHMLSVLDGANVLNQVVLTKVDKVSPHDLLRSIEGVCQAILAHPASVPVVHCVSAHKGLGMEELANTV 714
T+SPWVW ++G+D +SA+ + R +++ + P K +LP AG PE+AF GRSN GKSTL+G L+ N+KLVR SK PGCT+TVN+F L + G ++ ++ Y+VDLPGYGFA+ + V+ WT V G++ R +LRRTFVL+D RHG++ DE M+++LD V Q+VLTK D+++ D+ +EGV +A H A PVVH VSA G G+ +L +T+
Sbjct: 3 TKSPWVWTMKGMDADSAVHRTDPDIARGCRAMQAGFFPPNLFKFDLPKAGVPEVAFCGRSNVGKSTLVGTLINNTKLVRASKEPGCTRTVNYFGLTAPTRIKKGSEVDRAAVYMVDLPGYGFAKAPVQEVQAWTAAVEGFIVNRDCALLRRTFVLIDGRHGVKQHDEDMMTLLDDHGVSYQIVLTKADQLTKRDIAVVVEGVMRAAARHAACYPVVHVVSARDGHGVLQLLDTI 236
BLAST of mRNA_S-dermatodea_contig13623.2099.1 vs. uniprot
Match: A0A482SLS6_9ARCH (Probable GTP-binding protein EngB n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SLS6_9ARCH) HSP 1 Score: 176 bits (445), Expect = 7.380e-51 Identity = 93/196 (47.45%), Postives = 129/196 (65.82%), Query Frame = 1
Query: 127 SLRPEYVAPASLKHELPTAGRPELAFAGRSNAGKSTLIGELLGNSKLVRTSKAPGCTKTVNFFALRDGG--DIPQSYLVDLPGYGFARQNKRAVRQWTGVVNGYLEGRPPTVLRRTFVLVDSRHGLQPGDEHMLSVLDGANVLNQVVLTKVDKVSPHDLLRSIEGVCQAILA--HPASVPVVHCVSAHKGLGMEEL 702
SL P Y+ P+ H+LP+AGRPE+AF GRSN GKS+L+ LLG L+R SK PGCT T+N++AL G D YL+D+PGYGFA+ K+ ++W +VN YL R +LRR FVL+DSR G+Q D M+ +L+ A++ QVVLTK D VS ++ + + I + + +P+VH VSA KGLG+E+L
Sbjct: 70 SLNPTYIPPSYFNHQLPSAGRPEVAFVGRSNVGKSSLVEALLGTKGLLRISKEPGCTTTLNYYALAKGSALDDHACYLIDMPGYGFAKIAKQQQKKWLEIVNSYLMNRDQLLLRRVFVLIDSRRGVQMQDVEMMEMLNHAHIPYQVVLTKKDLVSDKEIKEKLFELFCVISRKKNNSCLPLVHVVSALKGLGLEDL 265
BLAST of mRNA_S-dermatodea_contig13623.2099.1 vs. uniprot
Match: A0A1I7NU75_9HYPH (Probable GTP-binding protein EngB n=4 Tax=Hyphomicrobium TaxID=81 RepID=A0A1I7NU75_9HYPH) HSP 1 Score: 167 bits (422), Expect = 4.060e-48 Identity = 89/181 (49.17%), Postives = 116/181 (64.09%), Query Frame = 1
Query: 172 LPTAGRPELAFAGRSNAGKSTLIGELLGNSKLVRTSKAPGCTKTVNFFALRDGGDIPQSYLVDLPGYGFARQNKRAVRQWTGVVNGYLEGRPPTVLRRTFVLVDSRHGLQPGDEHMLSVLDGANVLNQVVLTKVDKVSPHDLLRSIEGVCQAILAHPASVPVVHCVSAHKGLGMEELANTV 714
LP RPE+AFAGRSN GKS+LI L+G +L R S PG T+ +NFF + D+ +LVD+PGYGFA K V W V+ YL GR L R F+L+D+RHGL+P D+ +L +LDGA V QVVLTK DK+ P DL + +E +A+ HPA+ P + S+ KGLG EEL T+
Sbjct: 35 LPPDDRPEIAFAGRSNVGKSSLINALVGQLRLARASNTPGRTQELNFFTDPER-DL---FLVDMPGYGFAEAPKEKVAAWNKVIRAYLAGR--RTLLRVFLLIDARHGLKPPDDEILDLLDGAAVSYQVVLTKADKIKPTDLEKVMERTLKALAKHPAAFPAIIATSSEKGLGFEELRGTI 209
BLAST of mRNA_S-dermatodea_contig13623.2099.1 vs. uniprot
Match: A0A2D4VJ02_9HYPH (Probable GTP-binding protein EngB n=2 Tax=Parvibaculum TaxID=256616 RepID=A0A2D4VJ02_9HYPH) HSP 1 Score: 165 bits (418), Expect = 6.790e-48 Identity = 89/171 (52.05%), Postives = 110/171 (64.33%), Query Frame = 1
Query: 190 PELAFAGRSNAGKSTLIGELLGNSKLVRTSKAPGCTKTVNFFALRDGGDIPQSYLVDLPGYGFARQNKRAVRQWTGVVNGYLEGRPPTVLRRTFVLVDSRHGLQPGDEHMLSVLDGANVLNQVVLTKVDKVSPHDLLRSIEGVCQAILAHPASVPVVHCVSAHKGLGMEEL 702
PE AFAGRSN GKS+L+ L G L RTS PG TK +NFFAL LVDLPGYG+AR+ K V QWT ++ YL GRP LRR FVLVDSRHGL+ D ++S+LD V Q+VLTK+DK+ ++L IE + + HPAS PV+H S+ KG G+ EL
Sbjct: 2 PEGAFAGRSNVGKSSLVNALTGRKTLARTSNTPGRTKELNFFALGPAAGAAL-ILVDLPGYGYARETKSRVAQWTALIIDYLRGRPE--LRRVFVLVDSRHGLKDSDRDVMSMLDEVAVSYQIVLTKIDKLKKNELESRIEEIRAELKKHPASHPVIHATSSEKGTGIAEL 169
BLAST of mRNA_S-dermatodea_contig13623.2099.1 vs. uniprot
Match: A0A1G7WQA0_9PROT (Probable GTP-binding protein EngB n=1 Tax=Roseospirillum parvum TaxID=83401 RepID=A0A1G7WQA0_9PROT) HSP 1 Score: 165 bits (418), Expect = 1.680e-47 Identity = 94/209 (44.98%), Postives = 125/209 (59.81%), Query Frame = 1
Query: 88 DPESALAVPRTRTSLRPEYVAPASLKHELPTAGRPELAFAGRSNAGKSTLIGELLGNSKLVRTSKAPGCTKTVNFFALRDGGDIPQSYLVDLPGYGFARQNKRAVRQWTGVVNGYLEGRPPTVLRRTFVLVDSRHGLQPGDEHMLSVLDGANVLNQVVLTKVDKVSPHDLLRSIEGVCQAILAHPASVPVVHCVSAHKGLGMEELANTV 714
D + L V R + +V A+ +LP AG PE+AF GRSN GKS+LI L G++ L RTS PG T+ +NFF L G + LVDLPGYG+A+ K+ V W G++ YL+GR P LRRT VL+D+RHGL+ D M+ +LD A V Q VLTK DK+ P L ++ Q + HPA+ P + SA KG G+ EL T+
Sbjct: 11 DAAARLEVGRRLFAAPCTFVRGATKNADLPPAGPPEVAFIGRSNVGKSSLINALTGHNGLARTSVTPGRTQQINFFDL--AGRLT---LVDLPGYGYAKAPKKLVESWNGLIRNYLKGRAP--LRRTLVLIDARHGLKDSDHAMMDLLDKAAVNYQAVLTKADKIGPTSLATRLKDTAQQLARHPAAHPEIAATSAEKGTGIAELRATL 212
BLAST of mRNA_S-dermatodea_contig13623.2099.1 vs. uniprot
Match: A0A101W6L7_9PROT (Probable GTP-binding protein EngB n=1 Tax=Alphaproteobacteria bacterium BRH_c36 TaxID=1734406 RepID=A0A101W6L7_9PROT) HSP 1 Score: 164 bits (416), Expect = 2.560e-47 Identity = 88/181 (48.62%), Postives = 113/181 (62.43%), Query Frame = 1
Query: 172 LPTAGRPELAFAGRSNAGKSTLIGELLGNSKLVRTSKAPGCTKTVNFFALRDGGDIPQSYLVDLPGYGFARQNKRAVRQWTGVVNGYLEGRPPTVLRRTFVLVDSRHGLQPGDEHMLSVLDGANVLNQVVLTKVDKVSPHDLLRSIEGVCQAILAHPASVPVVHCVSAHKGLGMEELANTV 714
LP A R E+AFAGRSN GKS+LI LL L RTS PG T+ +N FA G P+ YL DLPGYGFA+ K V WT +V YL GRP L+R F+L+DSRHG++P D ++ +LD + V QVVLTK+DK+ + + +AI HPA+ P V VS+ KG G+ EL T+
Sbjct: 24 LPDADRAEIAFAGRSNVGKSSLINALLRQGGLARTSNTPGRTQELNVFAPAAGEQAPEVYLFDLPGYGFAKAPKDKVDTWTSLVKDYLRGRP--TLKRVFLLIDSRHGIKPVDREIMEMLDISAVSYQVVLTKIDKIKVPQIEALLAATTEAIKKHPAAYPAVIAVSSLKGTGLAELRGTL 202
BLAST of mRNA_S-dermatodea_contig13623.2099.1 vs. uniprot
Match: A0A2W4PIV6_9PROT (Probable GTP-binding protein EngB n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A2W4PIV6_9PROT) HSP 1 Score: 164 bits (414), Expect = 6.130e-47 Identity = 89/185 (48.11%), Postives = 113/185 (61.08%), Query Frame = 1
Query: 172 LPTAGRPELAFAGRSNAGKSTLIGELLGNSKLVRTSKAPGCTKTVNFFA----LRDGGDIPQSYLVDLPGYGFARQNKRAVRQWTGVVNGYLEGRPPTVLRRTFVLVDSRHGLQPGDEHMLSVLDGANVLNQVVLTKVDKVSPHDLLRSIEGVCQAILAHPASVPVVHCVSAHKGLGMEELANTV 714
LP AG PE+AFAGRSN GKS+LI L G L RTS PG T+ +N+F +G D+P LVD+PGYG+A+ K V QWT +V YL GRP L+R +VL+D+RHG++ DE + S+LD A V Q+VLTK DK+ L R IE I PA+ P V S+ G G+EEL V
Sbjct: 28 LPPAGPPEIAFAGRSNVGKSSLINALTGQKGLARTSGTPGRTQELNYFVPGGFSGEGADLPPMALVDMPGYGYAKAPKEQVEQWTRLVFDYLRGRP--TLKRVYVLIDARHGVKSNDEEVFSLLDKAAVSYQLVLTKTDKIKAPGLARMIEETMARIRKRPAAFPAVLATSSETGTGLEELREAV 210
BLAST of mRNA_S-dermatodea_contig13623.2099.1 vs. uniprot
Match: A0A6I3KII9_9HYPH (Probable GTP-binding protein EngB n=1 Tax=Hyphomicrobium album TaxID=2665159 RepID=A0A6I3KII9_9HYPH) HSP 1 Score: 163 bits (412), Expect = 1.160e-46 Identity = 87/181 (48.07%), Postives = 113/181 (62.43%), Query Frame = 1
Query: 172 LPTAGRPELAFAGRSNAGKSTLIGELLGNSKLVRTSKAPGCTKTVNFFALRDGGDIPQSYLVDLPGYGFARQNKRAVRQWTGVVNGYLEGRPPTVLRRTFVLVDSRHGLQPGDEHMLSVLDGANVLNQVVLTKVDKVSPHDLLRSIEGVCQAILAHPASVPVVHCVSAHKGLGMEELANTV 714
LP A RPE+AFAGRSN GKS+LI L+ L RTS PG T+ +N+F D ++VD+PGYG+A+ V W +V YL GR T L R F+L+D+RHGL+P D+ + +LD A V QVVLTK DK+ PH+L E +AI HPA+ P V SA KGLG++EL T+
Sbjct: 32 LPPADRPEIAFAGRSNVGKSSLINALVRQGGLARTSNTPGRTQELNYFR----SDADPLFIVDMPGYGYAKAPVDKVAAWGELVTDYLRGR--TTLARVFLLIDARHGLKPTDQQVADILDEAAVTYQVVLTKADKIKPHELEAVTEATAKAIAKHPAAFPHVIVTSAEKGLGVDELRATI 206
BLAST of mRNA_S-dermatodea_contig13623.2099.1 vs. uniprot
Match: G2IIN0_SPHSK (Probable GTP-binding protein EngB n=2 Tax=unclassified Sphingobium TaxID=2611147 RepID=G2IIN0_SPHSK) HSP 1 Score: 162 bits (411), Expect = 1.590e-46 Identity = 93/181 (51.38%), Postives = 115/181 (63.54%), Query Frame = 1
Query: 172 LPTAGRPELAFAGRSNAGKSTLIGELLGNSKLVRTSKAPGCTKTVNFFALRDGGDIPQSYLVDLPGYGFARQNKRAVRQWTGVVNGYLEGRPPTVLRRTFVLVDSRHGLQPGDEHMLSVLDGANVLNQVVLTKVDKVSPHDLLRSIEGVCQAILAHPASVPVVHCVSAHKGLGMEELANTV 714
LP A PE+AFAGRSN GKS+LI L G + L RTS PG T+ +NFF D G + LVD+PGYG+A+ K V+QW +VN YL GRP VL+RT VL+DSRHGL+ DE +L +LD A V +VVLTK DKV DL IE A+ PA+ P + S+ KG+GM EL V
Sbjct: 33 LPDADVPEVAFAGRSNVGKSSLINALTGRNALARTSNTPGRTQELNFF---DVGSPLRFRLVDMPGYGYAKAPKDVVKQWRFLVNDYLRGRP--VLKRTHVLIDSRHGLKDVDETLLDMLDEAAVSYRVVLTKADKVKASDLAAVIERTAAAMRKRPAAHPQIIATSSEKGMGMAELRAAV 208 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig13623.2099.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig13623.2099.1 >prot_S-dermatodea_contig13623.2099.1 ID=prot_S-dermatodea_contig13623.2099.1|Name=mRNA_S-dermatodea_contig13623.2099.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=238bp MRSPAALRQLTGQLAVATRSPWVWVVQGVDPESALAVPRTRTSLRPEYVAback to top mRNA from alignment at S-dermatodea_contig13623:4829..5542- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig13623.2099.1 ID=mRNA_S-dermatodea_contig13623.2099.1|Name=mRNA_S-dermatodea_contig13623.2099.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=714bp|location=Sequence derived from alignment at S-dermatodea_contig13623:4829..5542- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig13623:4829..5542- >mRNA_S-dermatodea_contig13623.2099.1 ID=mRNA_S-dermatodea_contig13623.2099.1|Name=mRNA_S-dermatodea_contig13623.2099.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1428bp|location=Sequence derived from alignment at S-dermatodea_contig13623:4829..5542- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |