prot_S-dermatodea_contig13599.2083.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig13599.2083.1
Unique Nameprot_S-dermatodea_contig13599.2083.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length219
Homology
BLAST of mRNA_S-dermatodea_contig13599.2083.1 vs. uniprot
Match: A0A6H5JQN4_9PHAE (Lon N-terminal domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQN4_9PHAE)

HSP 1 Score: 172 bits (437), Expect = 1.100e-48
Identity = 81/106 (76.42%), Postives = 93/106 (87.74%), Query Frame = 0
Query:   16 QLCVFMVEDFVFPGMTRRFRIFEPRYRALVKRCLGEAEPLLILPLARGGNTVGTAAYVSGLHNVEEDGRCEIEITGISRCNVKTMWMKGESFGLHEAVVEYFGDDK 121
            QL VF V++ VFPGMT+RFRIFEPRYRALVK+CL E EPL ILPL+RGGNTV T A VSGL+NVE DGRCE+E+TGI+RC+VKTMWMKGESFGL EA VE FGD++
Sbjct:   34 QLGVFKVDEVVFPGMTKRFRIFEPRYRALVKQCLAEDEPLAILPLSRGGNTVATTARVSGLYNVEADGRCEVEMTGIARCSVKTMWMKGESFGLFEAEVELFGDEQ 139          
BLAST of mRNA_S-dermatodea_contig13599.2083.1 vs. uniprot
Match: D7G2L9_ECTSI (Peptidase S16 lon domain protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2L9_ECTSI)

HSP 1 Score: 178 bits (452), Expect = 1.480e-48
Identity = 84/106 (79.25%), Postives = 94/106 (88.68%), Query Frame = 0
Query:   16 QLCVFMVEDFVFPGMTRRFRIFEPRYRALVKRCLGEAEPLLILPLARGGNTVGTAAYVSGLHNVEEDGRCEIEITGISRCNVKTMWMKGESFGLHEAVVEYFGDDK 121
            QL VF V++ VFPGMT+RFRIFEPRYRALVK+CL E EPL ILPL+RGGNTV T A VSGLHNVE DGRCE+EITGI+RC+VKTMWMKGESFGL EAVVE FGD++
Sbjct:  369 QLGVFKVDEVVFPGMTKRFRIFEPRYRALVKQCLAEDEPLAILPLSRGGNTVATTARVSGLHNVEADGRCEVEITGIARCSVKTMWMKGESFGLFEAVVELFGDEQ 474          
BLAST of mRNA_S-dermatodea_contig13599.2083.1 vs. uniprot
Match: A0A5B8MTA4_9CHLO (Lon N-terminal domain-containing protein n=1 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MTA4_9CHLO)

HSP 1 Score: 63.9 bits (154), Expect = 2.560e-8
Identity = 37/108 (34.26%), Postives = 58/108 (53.70%), Query Frame = 0
Query:   26 VFPGMTRRFRIFEPRYRALVKRCLGEAEPLLILPLARGGN----TVGTAAYVSGLHNVEEDGRCEIEITGISR------CNVKTMWMKGESFGLHEAVVEYFGDDKQD 123
            ++P    + RIFEPRY+A+VK+C+   E    +P     N    T+GT AYV  + ++  DG   I I G+ R      C+++T   +  SFGL+ A +++F D   D
Sbjct:  312 LYPATEMQLRIFEPRYKAMVKQCVENKEVFGFIPKDDKNNKFVDTIGTIAYVKEIIDMSPDGESTIVIKGLRRFKFKKGCSLRT---QPGSFGLNYADIQFFDDTSDD 416          
BLAST of mRNA_S-dermatodea_contig13599.2083.1 vs. uniprot
Match: A0A4D9CXP4_9STRA (Lon N-terminal domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CXP4_9STRA)

HSP 1 Score: 63.9 bits (154), Expect = 2.730e-8
Identity = 35/110 (31.82%), Postives = 63/110 (57.27%), Query Frame = 0
Query:   12 SERQQLCVFMVEDFVFPGMTRRFRIFEPRYRALVKRCLGEAEPLLILPLARGGNTVGTAAYVSGLHNVEED-GRCEIEITGISRCNVKTMWMKGESFGLHEAVVEYFGDD 120
            ++ + L +F ++  +FPG +   ++FEPRYR +VK+CL   EP     L    ++VGT A ++ ++ +EE+ G   + ++G  R  V++  +  +SFGL  A    F D+
Sbjct:  346 TQARDLPLFRLQSVLFPGCSLILKVFEPRYRRMVKQCLERNEPF---GLVHAQDSVGTLASITEVYRLEEETGVSILRVSGTRRFQVESSSLAEDSFGLLTATRARFFDE 452          
BLAST of mRNA_S-dermatodea_contig13599.2083.1 vs. uniprot
Match: A0A1A3QS63_9MYCO (ATP-dependent protease n=1 Tax=Mycobacterium sp. 1081908.1 TaxID=1834066 RepID=A0A1A3QS63_9MYCO)

HSP 1 Score: 52.8 bits (125), Expect = 6.910e-5
Identity = 30/71 (42.25%), Postives = 40/71 (56.34%), Query Frame = 0
Query:   13 ERQQLCVFMVEDFVFPGMTRRFRIFEPRYRALVKRCLGEAEPLLILPLARGGNTVGTAAY--VSGLHNVEE 81
            ER +  +F +E  + PG     RIFEPRY ALV+RCL  AEP  ++ +A+G    G  A   V  L  +EE
Sbjct:    5 ERVERAMFPLESALLPGQELPLRIFEPRYAALVRRCLAGAEPFGVVLIAQGREVGGGDARCDVGVLSRIEE 75          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig13599.2083.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5JQN4_9PHAE1.100e-4876.42Lon N-terminal domain-containing protein n=1 Tax=E... [more]
D7G2L9_ECTSI1.480e-4879.25Peptidase S16 lon domain protein n=1 Tax=Ectocarpu... [more]
A0A5B8MTA4_9CHLO2.560e-834.26Lon N-terminal domain-containing protein n=1 Tax=C... [more]
A0A4D9CXP4_9STRA2.730e-831.82Lon N-terminal domain-containing protein n=1 Tax=N... [more]
A0A1A3QS63_9MYCO6.910e-542.25ATP-dependent protease n=1 Tax=Mycobacterium sp. 1... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003111Lon, substrate-binding domainPFAMPF02190LON_substr_bdgcoord: 21..130
e-value: 7.5E-10
score: 39.0
NoneNo IPR availableGENE3D2.30.130.40coord: 3..116
e-value: 4.3E-13
score: 50.8
IPR015947PUA-like superfamilySUPERFAMILY88697PUA domain-likecoord: 16..127

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig13599contigS-dermatodea_contig13599:1308..4268 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig13599.2083.1mRNA_S-dermatodea_contig13599.2083.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig13599 1308..4268 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig13599.2083.1 ID=prot_S-dermatodea_contig13599.2083.1|Name=mRNA_S-dermatodea_contig13599.2083.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=219bp
QQQRVAISSVLSERQQLCVFMVEDFVFPGMTRRFRIFEPRYRALVKRCLG
EAEPLLILPLARGGNTVGTAAYVSGLHNVEEDGRCEIEITGISRCNVKTM
WMKGESFGLHEAVVEYFGDDKQDEHDNHNDRSAAAPAAAAAVATNAVDGA
ERNHPRSIAAASTTMTPSSSDEVPAASADERRGGDEAAVVFAGGDGTDGG
STAAGVSSGEGGDVEGLVA
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003111Lon_substr-bd
IPR015947PUA-like_sf