prot_S-dermatodea_contig1356.2067.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig1356.2067.1
Unique Nameprot_S-dermatodea_contig1356.2067.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length163
Homology
[Close]
BLAST of mRNA_S-dermatodea_contig1356.2067.1 vs. uniprot
Match: D7G3T3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3T3_ECTSI)

HSP 1 Score: 93.6 bits (231), Expect = 1.620e-19
Identity = 45/53 (84.91%), Postives = 48/53 (90.57%), Query Frame = 0 
Query:   38 DPLLGECSLNLVEVVSGRAPHVEEWVPLNTEGDLRLSLHYDSVGALPTPGDSV 90
            D LLGECSLNLVEVVSGRAPHVEEWVPL++EG+LRLSL YDSV  LP PGDSV
Sbjct:  245 DRLLGECSLNLVEVVSGRAPHVEEWVPLDSEGELRLSLDYDSVRELPVPGDSV 297
[Close]
BLAST of mRNA_S-dermatodea_contig1356.2067.1 vs. uniprot
Match: A0A7S2P503_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2P503_9STRA)

HSP 1 Score: 52.8 bits (125), Expect = 4.940e-5
Identity = 23/75 (30.67%), Postives = 41/75 (54.67%), Query Frame = 0 
Query:   38 DPLLGECSLNLVEVVSGRAPHVEEWVPLNTE-------GDLRLSLHYDSVGALPTPGDSVVLLCLANRLDFFPLP 105
            D  LGEC +N++++++GR P  +EW+ L  +       G++R+ + Y+   + P PGD   L       D +P+P
Sbjct:  108 DVFLGECHINILDILTGRLPCFDEWISLVDDNKDEEYIGEVRVVIEYEPTDSAPRPGDMCRLTSFCQLKDVYPIP 182
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig1356.2067.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G3T3_ECTSI1.620e-1984.91Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2P503_9STRA4.940e-530.67Hypothetical protein (Fragment) n=1 Tax=Leptocylin... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig1356contigS-dermatodea_contig1356:18800..20002 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig1356.2067.1mRNA_S-dermatodea_contig1356.2067.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig1356 18800..20002 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig1356.2067.1 ID=prot_S-dermatodea_contig1356.2067.1|Name=mRNA_S-dermatodea_contig1356.2067.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=163bp
AAAAAIAERVAGRDSTGGESSKAPKSSGDGGGSGGGGDPLLGECSLNLVE
VVSGRAPHVEEWVPLNTEGDLRLSLHYDSVGALPTPGDSVVLLCLANRLD
FFPLPIWDTEDDPARPNSPSWLWAGAASRRCLGRGGGGGAGKGFRVEEAD
DNFFLLSYATPEG
back to top