prot_S-dermatodea_contig1356.2066.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig1356.2066.1
Unique Nameprot_S-dermatodea_contig1356.2066.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length164
Homology
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BLAST of mRNA_S-dermatodea_contig1356.2066.1 vs. uniprot
Match: A0A6H5KRG9_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRG9_9PHAE)

HSP 1 Score: 106 bits (265), Expect = 7.780e-26
Identity = 64/139 (46.04%), Postives = 89/139 (64.03%), Query Frame = 0 
Query:   33 VDDALEVGCLSVQLVGARNIK-VGGGGMIDLF-LAPEVNAYCKISLGECEVTSGMAVRTSVGHTWNREQLFFPVKVPLSCVVGAA----KVWDTPQTDNIKNKRAGSSYPLARNSAAAGRAP--GGWSDPGSASCGASL 163
            V+D LEVG L V L+ AR++K V  GG+ D+  L+P+ + YC+ +LGE E TSG+ VRT+ GH+WNREQ+FFPVKVP+SCV+G +        +    +  N+R G+  P  R +A  G  P  GG    GS +CG+SL
Sbjct:    6 VEDMLEVGSLHVGLIAARDVKRVKQGGVSDMLGLSPQASPYCRFTLGEYEFTSGVGVRTTGGHSWNREQIFFPVKVPISCVIGGSGQSYHTAGSGSDGSSTNRRKGTKGP--RKAATPGGQPKSGGKGGSGSVACGSSL 142
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BLAST of mRNA_S-dermatodea_contig1356.2066.1 vs. uniprot
Match: D7G3T3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3T3_ECTSI)

HSP 1 Score: 94.0 bits (232), Expect = 1.210e-19
Identity = 45/81 (55.56%), Postives = 62/81 (76.54%), Query Frame = 0 
Query:   37 LEVGCLSVQLVGARNIK-VGGGGMIDLF-LAPEVNAYCKISLGECEVTSGMAVRTSVGHTWNREQLFFPVKVPLSCVVGAA 115
            L VG L V L+ AR++K V  GG+ D+  L+P+ + YC+ +LGE E TSG+ VRT+ GH+WNREQ++FPVKVP+SCVVG +
Sbjct:    2 LGVGSLHVGLIAARDVKRVKQGGVSDMLGLSPQASPYCRFTLGEYEFTSGVGVRTTGGHSWNREQIYFPVKVPISCVVGGS 82
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig1356.2066.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KRG9_9PHAE7.780e-2646.04Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
D7G3T3_ECTSI1.210e-1955.56Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig1356contigS-dermatodea_contig1356:15033..18031 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig1356.2066.1mRNA_S-dermatodea_contig1356.2066.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig1356 15033..18033 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig1356.2066.1 ID=prot_S-dermatodea_contig1356.2066.1|Name=mRNA_S-dermatodea_contig1356.2066.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=164bp
ELLAGARCSQDECCERRTADIAMATAEIRPEAVDDALEVGCLSVQLVGAR
NIKVGGGGMIDLFLAPEVNAYCKISLGECEVTSGMAVRTSVGHTWNREQL
FFPVKVPLSCVVGAAKVWDTPQTDNIKNKRAGSSYPLARNSAAAGRAPGG
WSDPGSASCGASLD
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