prot_S-dermatodea_contig13451.2028.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig13451.2028.1
Unique Nameprot_S-dermatodea_contig13451.2028.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length228
Homology
BLAST of mRNA_S-dermatodea_contig13451.2028.1 vs. uniprot
Match: D7FKX7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKX7_ECTSI)

HSP 1 Score: 232 bits (591), Expect = 1.840e-67
Identity = 162/234 (69.23%), Postives = 177/234 (75.64%), Query Frame = 0
Query:    1 REEFLAESASSMVKSSSANGTTNANDLDDFKDGYGSDGGYXXXXGGGGXXDYG----GFXXXXXXXXXXXXXXXXXXXXXDVSVAPISLEDAFRDKPQTYEDLCRSHIEAFMRGTEKYAHETNLSKRVGAWQEKLEPLMRRQENRQAFDIHVYGQSVLSRVASALTPSERARAQKAVKGAKERVADKSTPSREE--KSEDVEPDLPLVDFGAVAGGKERYDVCRLFLASLQLVS 228
            RE+FL ESA           +   ND+    DGYGSDG Y    GGGG  DYG    G XXXXXXXXXXXXXXXXXXXXXD  VAPISLEDAFR+KPQTYEDLCR+HIEAFMRGTEKYAHET LSKRVGAWQEKLEPLM  QE RQAFDIH YGQSVLSRVAS LTP++RARA  A KG   +VAD +  S EE  +++  EPD+PLVDFG V  GKER+DVCRLFLASLQL +
Sbjct:  552 REDFLPESAPPD--------SAGMNDVGTDYDGYGSDGSYCSD-GGGGYADYGDQSDGGXXXXXXXXXXXXXXXXXXXXXDAGVAPISLEDAFRNKPQTYEDLCRNHIEAFMRGTEKYAHETQLSKRVGAWQEKLEPLMESQEKRQAFDIHAYGQSVLSRVASVLTPAQRARAHTAAKGVHPKVADDAAASPEEAVQADTAEPDVPLVDFGTVVAGKERFDVCRLFLASLQLAN 776          
BLAST of mRNA_S-dermatodea_contig13451.2028.1 vs. uniprot
Match: A0A6H5KBI6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBI6_9PHAE)

HSP 1 Score: 217 bits (552), Expect = 1.450e-62
Identity = 114/151 (75.50%), Postives = 128/151 (84.77%), Query Frame = 0
Query:   80 VAPISLEDAFRDKPQTYEDLCRSHIEAFMRGTEKYAHETNLSKRVGAWQEKLEPLMRRQENRQAFDIHVYGQSVLSRVASALTPSERARAQKAVKGAKERVADKSTPSREE--KSEDVEPDLPLVDFGAVAGGKERYDVCRLFLASLQLVS 228
            VAPISLE AFR+KPQTYEDLCR+HIEAFMRGTEKYAHET LSKRVGAWQEKLEPLM  QE RQAFDIH YGQSVLSRVAS LTP++RARA  AVKG + ++AD S  S EE  +++  EP++PLVDFG V  GKER+DVCRLFLASLQL +
Sbjct:  497 VAPISLEGAFRNKPQTYEDLCRNHIEAFMRGTEKYAHETQLSKRVGAWQEKLEPLMESQEKRQAFDIHAYGQSVLSRVASVLTPAQRARAHTAVKGVQPKMADNSAGSPEEAVQADTAEPEVPLVDFGTVVAGKERFDVCRLFLASLQLAN 647          
BLAST of mRNA_S-dermatodea_contig13451.2028.1 vs. uniprot
Match: A0A836CG43_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CG43_9STRA)

HSP 1 Score: 122 bits (305), Expect = 3.580e-28
Identity = 79/183 (43.17%), Postives = 100/183 (54.64%), Query Frame = 0
Query:   82 PISLEDAFRDKPQTYEDLCRSHIEAFMRGTEK------------------------------------YAHETNLSKRVGAWQEKLEPLMRRQENRQAFDIHVYGQSVLSRVASALTPSERARAQKAVKGAKERVADKSTPSREEKSEDVEPDLPLVDFGAVAGGKERYDVCRLFLASLQLVS 228
            P+SL DAFRD PQTYEDLCRSHI+AFMRG E+                                    YA ET LS+RVGAWQ++LEPL+R Q  R AFD+   G +VL   ASA+    RA        A+ER+A  +       ++D    + +V FG V  G+ER+DVCR+FLASLQL +
Sbjct:  585 PLSLADAFRDAPQTYEDLCRSHIQAFMRGAEQAPVPAEAEHDAAMRRSTVLTRRKALSRLLAPQNGHAYAQETGLSRRVGAWQDRLEPLLREQSARAAFDMRACGDAVL---ASAVAVLPRA--------ARERLAAAADADAPPPTKDKAAAVDVVAFGRVVAGRERFDVCRMFLASLQLAN 756          
BLAST of mRNA_S-dermatodea_contig13451.2028.1 vs. uniprot
Match: A0A7S2RIG3_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RIG3_9STRA)

HSP 1 Score: 113 bits (283), Expect = 2.640e-25
Identity = 61/147 (41.50%), Postives = 93/147 (63.27%), Query Frame = 0
Query:   80 VAPISLEDAFRDKPQTYEDLCRSHIEAFMRGTEKYAHETNLSKRVGAWQEKLEPLMRRQENRQAFDIHVYGQSVLSRVASALTPSERARAQKAVKGAKERVADKSTPSREEKSEDVEPDLPLVDFGAVAGGKERYDVCRLFLASLQL 226
            +API+L+DAFR  P++Y DLC++HI AF++G ++YAHET LS+RV  WQ +LEP++  Q  R+AFDIH+YG+ ++  +A+A +          VK  K     K  PS ++          ++ F ++   K  ++VCR+FLASLQL
Sbjct:  464 MAPIALDDAFRVAPKSYADLCQAHITAFLKGADQYAHETQLSRRVSEWQSRLEPVLAEQTQRRAFDIHLYGEEIIHDLATAGSLK--------VKSGK-----KGAPSNDK----------VIPFNSIVADKPHFEVCRMFLASLQL 587          
BLAST of mRNA_S-dermatodea_contig13451.2028.1 vs. uniprot
Match: A0A329RXK6_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329RXK6_9STRA)

HSP 1 Score: 108 bits (271), Expect = 1.170e-23
Identity = 59/136 (43.38%), Postives = 85/136 (62.50%), Query Frame = 0
Query:   93 PQTYEDLCRSHIEAFMRGTEKYAHETNLSKRVGAWQEKLEPLMRRQENRQAFDIHVYGQSVLSRVASALTPSERARAQKAVKGAKERVADKSTPSREEKSEDVEPDLPLVDFGAVAGGKERYDVCRLFLASLQLVS 228
            P TYE++CR H+ +FM GTEKY  ET+LSK+V  WQ+KL PL+++Q+ R  FDIH+YG+ ++ R+      +  A   K  K  K + A   + S EE+S        +V F  +  GK +++VCRLFLASLQL +
Sbjct:  549 PLTYEEICRQHLASFMSGTEKYVRETDLSKKVSDWQDKLSPLLKQQDTRPPFDIHLYGREIIGRLEEEQKNASLAMHSKTTKRDKNKRARLESASDEEES--------VVPFETLVDGKSQFEVCRLFLASLQLAN 676          
BLAST of mRNA_S-dermatodea_contig13451.2028.1 vs. uniprot
Match: A0A225X0F2_9STRA (Condensin-2 complex subunit H2 n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225X0F2_9STRA)

HSP 1 Score: 108 bits (270), Expect = 1.550e-23
Identity = 61/143 (42.66%), Postives = 86/143 (60.14%), Query Frame = 0
Query:   86 EDAFRDKPQTYEDLCRSHIEAFMRGTEKYAHETNLSKRVGAWQEKLEPLMRRQENRQAFDIHVYGQSVLSRVASALTPSERARAQKAVKGAKERVADKSTPSREEKSEDVEPDLPLVDFGAVAGGKERYDVCRLFLASLQLVS 228
            ED   D P TYE++CR H+ +FM GTEKY  ET+LSK+V  WQEKL PL+++Q+    FDIH YG+ ++ R+      S   + +K+ +  K + A     S +E+ E        V F  +  GK +Y+VCRLFLASLQL +
Sbjct:  502 EDDSTDGPLTYEEICRQHLASFMSGTEKYVRETDLSKKVSDWQEKLTPLLKQQDTHPPFDIHHYGREIIGRLEEEQKNSSLDKQRKSTRRDKNKRARVGQVSDDEERE-------AVPFETLVDGKSQYEVCRLFLASLQLAN 637          
BLAST of mRNA_S-dermatodea_contig13451.2028.1 vs. uniprot
Match: G5A917_PHYSP (Uncharacterized protein n=5 Tax=Phytophthora TaxID=4783 RepID=G5A917_PHYSP)

HSP 1 Score: 107 bits (268), Expect = 2.860e-23
Identity = 61/137 (44.53%), Postives = 86/137 (62.77%), Query Frame = 0
Query:   93 PQTYEDLCRSHIEAFMRGTEKYAHETNLSKRVGAWQEKLEPLMRRQENRQAFDIHVYGQSVLSRVASALTPSERARAQKAVKGAKERVADKSTPSREEK-SEDVEPDLPLVDFGAVAGGKERYDVCRLFLASLQLVS 228
            P TYE++CR H+ +FM GTEKY  ET+LSK+V  WQEKL PL+++Q+    FDIH+YG+ ++ R+A     S   +  K+ K       DK+  +R E  S+D E     V F  +  GK +++VCRLFLASLQL +
Sbjct:  502 PLTYEEICRQHLASFMSGTEKYVRETDLSKQVSDWQEKLTPLLKQQDAHPPFDIHLYGREIIERLAEEKKNSSLDKRSKSTK------RDKNKRARVEPVSDDEEKKKEAVPFETLVVGKSQFEVCRLFLASLQLAN 632          
BLAST of mRNA_S-dermatodea_contig13451.2028.1 vs. uniprot
Match: W2QP13_PHYPN (Uncharacterized protein n=1 Tax=Phytophthora parasitica (strain INRA-310) TaxID=761204 RepID=W2QP13_PHYPN)

HSP 1 Score: 105 bits (262), Expect = 6.370e-23
Identity = 59/136 (43.38%), Postives = 85/136 (62.50%), Query Frame = 0
Query:   93 PQTYEDLCRSHIEAFMRGTEKYAHETNLSKRVGAWQEKLEPLMRRQENRQAFDIHVYGQSVLSRVASALTPSERARAQKAVKGAKERVADKSTPSREEKSEDVEPDLPLVDFGAVAGGKERYDVCRLFLASLQLVS 228
            P TYE++CR H+ +FM GTEKY  ET+LSK+V  WQ+KL PL+++Q+ R  FDIH YG+ ++ R+      S   +  K  K A+ + A  +T   EE++E        V F  +  GK +++VCRLFLASLQL +
Sbjct:  254 PLTYEEICRQHLASFMSGTEKYVRETDLSKKVSDWQDKLSPLLKQQDTRPPFDIHQYGREIIGRLEEEQKNSSLEKHTKTTKKAQNKRARLAT--EEEETE-------TVPFETLVDGKSQFEVCRLFLASLQLAN 380          
BLAST of mRNA_S-dermatodea_contig13451.2028.1 vs. uniprot
Match: H3GF21_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GF21_PHYRM)

HSP 1 Score: 105 bits (263), Expect = 1.510e-22
Identity = 59/139 (42.45%), Postives = 85/139 (61.15%), Query Frame = 0
Query:   93 PQTYEDLCRSHIEAFMRGTEKYAHETNLSKRVGAWQEKLEPLMRRQENRQAFDIHVYGQSVLSRVAS---ALTPSERARAQKAVKGAKERVADKSTPSREEKSEDVEPDLPLVDFGAVAGGKERYDVCRLFLASLQLVS 228
            P TYE++CR H+ +FM GTEKY  ET+LSK+V  WQEKL PL+++Q+   AFDIH YG+ ++ R+     + +  + +RA +  K   +R      P  EE       ++  V F  + GGK  ++VCRLFLASLQL +
Sbjct:  892 PLTYEEICRQHLASFMSGTEKYVRETDLSKQVSDWQEKLTPLLKQQDAHPAFDIHHYGREIIDRLEEEQKSTSLDKHSRATRKDKATNKRARLDPVPEDEE-------EIETVPFETLVGGKSPFEVCRLFLASLQLAN 1023          
BLAST of mRNA_S-dermatodea_contig13451.2028.1 vs. uniprot
Match: D0N0Q7_PHYIT (Condensin-2 complex subunit H2, putative n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0N0Q7_PHYIT)

HSP 1 Score: 105 bits (262), Expect = 1.720e-22
Identity = 57/136 (41.91%), Postives = 82/136 (60.29%), Query Frame = 0
Query:   93 PQTYEDLCRSHIEAFMRGTEKYAHETNLSKRVGAWQEKLEPLMRRQENRQAFDIHVYGQSVLSRVASALTPSERARAQKAVKGAKERVADKSTPSREEKSEDVEPDLPLVDFGAVAGGKERYDVCRLFLASLQLVS 228
            P TYE++CR H+  FM GTEKY  ET+LSK+V  WQ+KL PL+++Q+ R  FDIH+YG+ ++ R+      S  AR  K  +  K +    +T   E ++         V F  +  GK +++VCRLFLASLQL +
Sbjct:  461 PLTYEEICRQHLATFMSGTEKYVRETDLSKKVSDWQDKLSPLLKQQDTRPPFDIHLYGREIIGRLEEEQKNSSLARHSKTTQRDKNKRIRLATDDEESET---------VPFETLVDGKSQFEVCRLFLASLQLAN 587          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig13451.2028.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FKX7_ECTSI1.840e-6769.23Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KBI6_9PHAE1.450e-6275.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CG43_9STRA3.580e-2843.17Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2RIG3_9STRA2.640e-2541.50Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A329RXK6_9STRA1.170e-2343.38Uncharacterized protein n=2 Tax=Phytophthora TaxID... [more]
A0A225X0F2_9STRA1.550e-2342.66Condensin-2 complex subunit H2 n=1 Tax=Phytophthor... [more]
G5A917_PHYSP2.860e-2344.53Uncharacterized protein n=5 Tax=Phytophthora TaxID... [more]
W2QP13_PHYPN6.370e-2343.38Uncharacterized protein n=1 Tax=Phytophthora paras... [more]
H3GF21_PHYRM1.510e-2242.45Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
D0N0Q7_PHYIT1.720e-2241.91Condensin-2 complex subunit H2, putative n=2 Tax=P... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR031737Condensin-2 complex subunit H2, C-terminalPFAMPF16858CNDH2_Ccoord: 86..227
e-value: 5.4E-36
score: 125.0
IPR031739Condensin-2 complex subunit H2PANTHERPTHR14324FAMILY NOT NAMEDcoord: 86..228

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig13451contigS-dermatodea_contig13451:275..6249 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig13451.2028.1mRNA_S-dermatodea_contig13451.2028.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig13451 275..6249 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig13451.2028.1 ID=prot_S-dermatodea_contig13451.2028.1|Name=mRNA_S-dermatodea_contig13451.2028.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=228bp
REEFLAESASSMVKSSSANGTTNANDLDDFKDGYGSDGGYSSDGGGGGGG
DYGGFSDAEGGGYMDAGGGRDGEGGGDVSVAPISLEDAFRDKPQTYEDLC
RSHIEAFMRGTEKYAHETNLSKRVGAWQEKLEPLMRRQENRQAFDIHVYG
QSVLSRVASALTPSERARAQKAVKGAKERVADKSTPSREEKSEDVEPDLP
LVDFGAVAGGKERYDVCRLFLASLQLVS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR031737CNDH2_C
IPR031739Ncaph2