prot_S-dermatodea_contig13287.1949.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig13287.1949.1
Unique Nameprot_S-dermatodea_contig13287.1949.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length588
Homology
BLAST of mRNA_S-dermatodea_contig13287.1949.1 vs. uniprot
Match: A0A6H5JDL7_9PHAE (LisH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDL7_9PHAE)

HSP 1 Score: 291 bits (746), Expect = 4.550e-82
Identity = 329/614 (53.58%), Postives = 356/614 (57.98%), Query Frame = 0
Query:    1 HRRSELTLRACSCVKQYLRCSLALAVLRQVQRSGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKASPRPAGRAAWQCKPLAVDDAAHAANVAAVKGAGL--GSGEGRQATGGLGLGWVAGAGXXXXXXXXXXXXXXXXAGRGRGGVAVRLGMHWAPAVQLMHHRGVQALINVVDAMLSQRTMGADTALYALDALGTAALCPLVYPELCRPGTNNSTEGGAQSSSTSALSHT---AASTSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVXXXXXXXXXXXXXXXXXXGWALPHNRLGVEVLLEAAGGVRQRDTGAVMCAALKVLETCCRPHKACGPPVQSVAGSAAGGAMMASSSAPGLSTAAXXXXXXXXXXXXAFGHRSG----------------------GXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYATRXXXXXXXXXXXXXXXXKXXGEGERSVDDRLQRPMRKLIRERNGIRVLVGLLRYRRQAAAADAVRLRAALCLLGLAHDVQIAQVLEKMRITTTLSDTVRAGPVVNR 587
            HRR+++TL AC CV+QYLRCSLALAVL+Q    GGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                              R  GR AWQCKPLAVDDA+HAANVAAVKG G   G GEGR A G                             R R  V VRLGM W+PAVQLMHHRG+QALINVVDAMLSQRT GA+  +YALDALGTAALCPLVYPE CR G N+    G +SSST A   +   AA + P           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                      ALP NRLGV+VLL+AA GVRQ+D G VMCAAL VL+ CCRPHK CGP +Q    +++  A     +A G STA XXXXXXXXXXXX                             G                                                 XXX                G G+  VDDRLQRPMRKLIRE NG+RVLVGLLRYRRQ  AADAVRLRAA+CLLGLAHDV IAQ+LEKMRIT TLSDTVRAGPVV R
Sbjct:  700 HRRTQVTLGACGCVRQYLRCSLALAVLKQ---RGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVTPPSPSLS--------------------RAPGRQAWQCKPLAVDDASHAANVAAVKGQGGLGGGGEGRTAAG----------------------------VRDREAVTVRLGMQWSPAVQLMHHRGMQALINVVDAMLSQRT-GAEAVVYALDALGTAALCPLVYPEFCRAGPNSPAGDGERSSSTPARDGSDGEAARSQPPLPPQPGGGRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----------------------ALPRNRLGVDVLLDAAAGVRQKDPG-VMCAALDVLDRCCRPHKGCGPLIQPGTATSSFAA-----TAGGDSTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGGTADGCGGVVGAEFKRPSASGDPAVAIGYRNNLRLVSGGRSSPRGXXXXXXXVTFAAGSRRDGSGSAQGSGDCVVDDRLQRPMRKLIRESNGLRVLVGLLRYRRQVVAADAVRLRAAMCLLGLAHDVHIAQMLEKMRITATLSDTVRAGPVVGR 1233          
BLAST of mRNA_S-dermatodea_contig13287.1949.1 vs. uniprot
Match: D7FHI0_ECTSI (LisH domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHI0_ECTSI)

HSP 1 Score: 281 bits (720), Expect = 1.130e-78
Identity = 341/612 (55.72%), Postives = 367/612 (59.97%), Query Frame = 0
Query:    1 HRRSELTLRACSCVKQYLRCSLALAVLRQ--VQRSGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKASPRPAGRAAWQCKPLAVDDAAHAANVAAVKGAGLGSGEGRQATGGLGLGWVAGAGXXXXXXXXXXXXXXXXAG-RGRGGVAVRLGMHWAPAVQLMHHRGVQALINVVDAMLSQRTMGADTALYALDALGTAALCPLVYPELCRPGTNNSTEGGAQSSSTSALSHTAASTSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVXXXXXXXXXXXXXXXXXXGWALPHNRLGVEVLLEAAGGVRQRDTGAVMCAALKVLETCCRPHKACGPPVQ---SVAGSAAGGAMMASSSAPG-----------------LSTAAXXXXXXXXXXXXAFGHRSGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYATRXXXXXXXXXXXXXXXXKXXGEG--ERSVDDRLQRPMRKLIRERNGIRVLVGLLRYRRQAAAADAVRLRAALCLLGLAHDVQIAQVLEKMRITTTLSDTVRAGPVVNR 587
            HRR+++TL AC CV+QYLRCSLALAVL+Q  V  +GG  XXXXXXXXXXXXXXXXXXXXXXXXXXXX                                   R  GR AWQCKPLAVDDA+HAANVAAVKG            GGLG GW                     AG R R  V VRLGMHW+PAVQLMHHRG+QALINVVD MLSQR MGA+T +YALDALGTA LCPLVYPE CR G N+   G                   XXXXXXXXXXXXXXXXXXXXXXXX                XXXXXXXXXX XXXXXX     XXXXXXX  ALP NRLGV+VLL+AA GVRQ+D G VMCAAL VL+ CCRPHK CGP +Q   + +  AA     ++++ PG                 L    XXXXXXXXXXXX      GG                                            X    XXXXXXXXXXXXXXXX XX     +R VDDRLQRPMRKLIRE NG+RVLVGLLRYRRQ  AADAVRLRAALCLLGLAHDV IAQ+LEKMRITTTLSDTVRAGPVV R
Sbjct:  649 HRRTQVTLGACGCVRQYLRCSLALAVLKQRGVSAAGGHAXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVTPPSPSLS-------------------------RAPGRPAWQCKPLAVDDASHAANVAAVKG-----------QGGLGGGWEG----------------RTAAGVRDREAVTVRLGMHWSPAVQLMHHRGMQALINVVDDMLSQR-MGAETVVYALDALGTAVLCPLVYPEFCRAGPNSPAGGXXX-----------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLQPRGGRASSGGEGRXXXXXXXXXXXXXXXXXEGDEGXXXXXXXXGALPRNRLGVDVLLDAAAGVRQKDPG-VMCAALNVLDRCCRPHKGCGPLIQPGTATSSFAATDGGDSTATQPGXXXXXXXXXXXXXXXRPLHAXXXXXXXXXXXXXXXXXXXRGGTADGRGGDVGAEVKRPSASGDPTAAAGHRDNLRLASGGRSTPRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDRVVDDRLQRPMRKLIRESNGLRVLVGLLRYRRQVVAADAVRLRAALCLLGLAHDVHIAQMLEKMRITTTLSDTVRAGPVVGR 1195          
BLAST of mRNA_S-dermatodea_contig13287.1949.1 vs. uniprot
Match: A0A5D6YBX6_9STRA (LisH domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YBX6_9STRA)

HSP 1 Score: 84.3 bits (207), Expect = 3.720e-13
Identity = 46/80 (57.50%), Postives = 58/80 (72.50%), Query Frame = 0
Query:  506 RSVDDRLQRPMRKLIRERNGIRVLVGLLRYRRQAAAADAVRLRAALCLLGLAHDVQIAQVLEKMRITTTLSDTVRAGPVV 585
            RS DD++ RP+RKL RERN I+V V LLRY+R    ADA+RL A   LLGL+ D QIAQ+LEKM+I   LSD +R  P++
Sbjct:  780 RSKDDKMLRPVRKLARERNAIKVCVQLLRYKRSVQNADAIRLLATRALLGLSRDKQIAQILEKMQIGQLLSDLIRNEPIL 859          
BLAST of mRNA_S-dermatodea_contig13287.1949.1 vs. uniprot
Match: A0A8J5IYG7_9STRA (LisH domain-containing protein n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5IYG7_9STRA)

HSP 1 Score: 79.7 bits (195), Expect = 9.530e-12
Identity = 42/80 (52.50%), Postives = 58/80 (72.50%), Query Frame = 0
Query:  506 RSVDDRLQRPMRKLIRERNGIRVLVGLLRYRRQAAAADAVRLRAALCLLGLAHDVQIAQVLEKMRITTTLSDTVRAGPVV 585
            ++ DD++ RP+RKL RERN I+V V LLRY+R    ADA+RL A   LLGL+ D  I+Q+LEKM++   LSD +R+ PV+
Sbjct:  633 KAKDDKMLRPVRKLARERNAIKVCVYLLRYKRSVQNADAIRLLATRALLGLSRDRHISQILEKMQVGQLLSDMIRSDPVL 712          
BLAST of mRNA_S-dermatodea_contig13287.1949.1 vs. uniprot
Match: G5A448_PHYSP (LisH domain-containing protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G5A448_PHYSP)

HSP 1 Score: 79.7 bits (195), Expect = 1.010e-11
Identity = 42/80 (52.50%), Postives = 58/80 (72.50%), Query Frame = 0
Query:  506 RSVDDRLQRPMRKLIRERNGIRVLVGLLRYRRQAAAADAVRLRAALCLLGLAHDVQIAQVLEKMRITTTLSDTVRAGPVV 585
            ++ DD++ RP+RKL RERN I+V V LLRY+R    ADA+RL A   LLGL+ D  I+Q+LEKM++   LSD +R+ PV+
Sbjct:  787 KAKDDKMLRPVRKLARERNAIKVCVYLLRYKRSVQNADAIRLLATRALLGLSRDRHISQILEKMQVGQLLSDMIRSDPVL 866          
BLAST of mRNA_S-dermatodea_contig13287.1949.1 vs. uniprot
Match: A0A425C4X6_9STRA (LisH domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A425C4X6_9STRA)

HSP 1 Score: 78.6 bits (192), Expect = 1.730e-11
Identity = 41/80 (51.25%), Postives = 58/80 (72.50%), Query Frame = 0
Query:  506 RSVDDRLQRPMRKLIRERNGIRVLVGLLRYRRQAAAADAVRLRAALCLLGLAHDVQIAQVLEKMRITTTLSDTVRAGPVV 585
            ++ DD++ RP+RKL RERN I+V V LLRY+R    ADA+RL +   LLGL+ D  I+Q+LEKM++   LSD +R+ PV+
Sbjct:  489 KAKDDKMLRPVRKLARERNAIKVCVYLLRYKRSVQNADAIRLLSTRALLGLSRDRHISQILEKMQVGQLLSDMIRSDPVL 568          
BLAST of mRNA_S-dermatodea_contig13287.1949.1 vs. uniprot
Match: A0A484EBA6_BRELC (LisH domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EBA6_BRELC)

HSP 1 Score: 79.0 bits (193), Expect = 1.770e-11
Identity = 41/80 (51.25%), Postives = 58/80 (72.50%), Query Frame = 0
Query:  506 RSVDDRLQRPMRKLIRERNGIRVLVGLLRYRRQAAAADAVRLRAALCLLGLAHDVQIAQVLEKMRITTTLSDTVRAGPVV 585
            ++ DD++ RP+RKL RERN I+V V LLRY+R    ADA+RL A   LLGL+ D  I+Q++EKM++   LSD +R+ PV+
Sbjct:  782 KAKDDKMLRPVRKLARERNAIKVCVYLLRYKRSVQNADAIRLLATRALLGLSRDRHISQIIEKMQVGQLLSDMIRSDPVL 861          
BLAST of mRNA_S-dermatodea_contig13287.1949.1 vs. uniprot
Match: A0A662Y0Y0_9STRA (LisH domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y0Y0_9STRA)

HSP 1 Score: 79.0 bits (193), Expect = 1.780e-11
Identity = 43/80 (53.75%), Postives = 57/80 (71.25%), Query Frame = 0
Query:  506 RSVDDRLQRPMRKLIRERNGIRVLVGLLRYRRQAAAADAVRLRAALCLLGLAHDVQIAQVLEKMRITTTLSDTVRAGPVV 585
            ++ DD++ RP+RKL RERN I+V V LLRY+R    ADA+RL A   LLGL+ D  I+Q+LEKM+I   LSD +R  PV+
Sbjct:  778 KAKDDKVLRPVRKLARERNAIKVCVYLLRYKRSVQNADAIRLLATRALLGLSRDRHISQILEKMQIGQLLSDMIRTEPVL 857          
BLAST of mRNA_S-dermatodea_contig13287.1949.1 vs. uniprot
Match: A0A0P1AL32_PLAHL (HIV-1 Vpr-binding protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AL32_PLAHL)

HSP 1 Score: 78.6 bits (192), Expect = 2.200e-11
Identity = 41/80 (51.25%), Postives = 58/80 (72.50%), Query Frame = 0
Query:  506 RSVDDRLQRPMRKLIRERNGIRVLVGLLRYRRQAAAADAVRLRAALCLLGLAHDVQIAQVLEKMRITTTLSDTVRAGPVV 585
            ++ DD++ RP+RKL RERN I+V V LLRY+R    ADA+RL A   LLGL+ D  I+Q++EKM++   LSD +R+ PV+
Sbjct:  778 KAKDDKMLRPVRKLARERNAIKVCVYLLRYKRSVQNADAIRLLATRSLLGLSRDRHISQIIEKMQVGQLLSDMIRSDPVL 857          
BLAST of mRNA_S-dermatodea_contig13287.1949.1 vs. uniprot
Match: A0A3M6VCW5_9STRA (LisH domain-containing protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VCW5_9STRA)

HSP 1 Score: 78.6 bits (192), Expect = 2.340e-11
Identity = 41/80 (51.25%), Postives = 58/80 (72.50%), Query Frame = 0
Query:  506 RSVDDRLQRPMRKLIRERNGIRVLVGLLRYRRQAAAADAVRLRAALCLLGLAHDVQIAQVLEKMRITTTLSDTVRAGPVV 585
            ++ DD++ RP+RKL RERN I+V V LLRY+R    ADA+RL +   LLGL+ D  I+Q+LEKM++   LSD +R+ PV+
Sbjct:  776 KAKDDKMLRPVRKLARERNAIKVCVYLLRYKRSVQNADAIRLLSTRALLGLSRDRHISQILEKMQVGQLLSDMIRSDPVL 855          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig13287.1949.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 18
Match NameE-valueIdentityDescription
A0A6H5JDL7_9PHAE4.550e-8253.58LisH domain-containing protein n=1 Tax=Ectocarpus ... [more]
D7FHI0_ECTSI1.130e-7855.72LisH domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A5D6YBX6_9STRA3.720e-1357.50LisH domain-containing protein n=1 Tax=Pythium bra... [more]
A0A8J5IYG7_9STRA9.530e-1252.50LisH domain-containing protein n=1 Tax=Phytophthor... [more]
G5A448_PHYSP1.010e-1152.50LisH domain-containing protein n=1 Tax=Phytophthor... [more]
A0A425C4X6_9STRA1.730e-1151.25LisH domain-containing protein n=1 Tax=Peronospora... [more]
A0A484EBA6_BRELC1.770e-1151.25LisH domain-containing protein n=1 Tax=Bremia lact... [more]
A0A662Y0Y0_9STRA1.780e-1153.75LisH domain-containing protein n=2 Tax=Nothophytop... [more]
A0A0P1AL32_PLAHL2.200e-1151.25HIV-1 Vpr-binding protein n=1 Tax=Plasmopara halst... [more]
A0A3M6VCW5_9STRA2.340e-1151.25LisH domain-containing protein n=2 Tax=Peronospora... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR033270VPRBP/DCAF1 familyPANTHERPTHR13129VPRBP PROTEIN-RELATEDcoord: 182..253
coord: 341..581

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig13287contigS-dermatodea_contig13287:887..6676 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig13287.1949.1mRNA_S-dermatodea_contig13287.1949.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig13287 887..6676 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig13287.1949.1 ID=prot_S-dermatodea_contig13287.1949.1|Name=mRNA_S-dermatodea_contig13287.1949.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=588bp
HRRSELTLRACSCVKQYLRCSLALAVLRQVQRSGGGGGTGQQQQQQQQQQ
QQQQGQQGSTSASGRGGGGSSGGGGGGGTAGAGAGISTAAVASPSPKASP
RPAGRAAWQCKPLAVDDAAHAANVAAVKGAGLGSGEGRQATGGLGLGWVA
GAGGVGGVGGVGGGGGAVGAGRGRGGVAVRLGMHWAPAVQLMHHRGVQAL
INVVDAMLSQRTMGADTALYALDALGTAALCPLVYPELCRPGTNNSTEGG
AQSSSTSALSHTAASTSPSQPSPLSAGAANASPGNTNTRSGGGGGSGGGG
GGSSSWGRSRSTGDGGIGVSGGAGGVDGGGGGSGSGGGWALPHNRLGVEV
LLEAAGGVRQRDTGAVMCAALKVLETCCRPHKACGPPVQSVAGSAAGGAM
MASSSAPGLSTAAAAGHAAGSAAGRAFGHRSGGGGGSAAAASAAASASSS
AAGAGPASGEGFRAPAGGAGAGAAESRDYATRGSGGGGGGGGGGGGGRKG
GGEGERSVDDRLQRPMRKLIRERNGIRVLVGLLRYRRQAAAADAVRLRAA
LCLLGLAHDVQIAQVLEKMRITTTLSDTVRAGPVVNR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR033270VPRBP/DCAF1