mRNA_S-dermatodea_contig13276.1944.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig13276.1944.1 vs. uniprot
Match: D8LRI4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRI4_ECTSI) HSP 1 Score: 471 bits (1212), Expect = 2.330e-149 Identity = 228/258 (88.37%), Postives = 244/258 (94.57%), Query Frame = 1
Query: 1 GKYTARLSEGRESSGRAEESTLLNLLFVPDGSPMKTLAKALLRLDGLSHVLAWTRDPVLACKDAAALYFVELPRVRLRFEAKADGVGGKVRLHSLEHAGMFISGPEGAEMSRLVEGLPSSLILENSERDRFLLLPSATLPGRPESNGTAFSGEMVLNRCDPWWLRCVGGGARHHLYPVHVSCCLLSTPSLAAALYLLVSRFVAGQYDQVFSMVEGCVTDLPLGKEEAGSLRWLGHLEHDHHPDAVACRLKLSLAAAPC 774
G+Y +LSEGRESSG+ ++STLLNLLFVPDGSPMK LAKALLRLDGLSHVLAWTRDPVLACKD A+L FVELPR+RLRFEAKADG GGKVRLHSLEHAGMFISG +GAEM++LVEGLPSSL+LENSE+DRFLLLPSATLPGRPES GT FSGE+VLNRCD WWLRCVG GARHHLYPVHVS CLLSTPSL+AALYLLVSRFVAGQY+Q FSMVEGCVTDLPLGKEEAGSLRWLGHLEHDHHPDAV+CRLKLSLAAAPC
Sbjct: 2027 GRYAVKLSEGRESSGKVDQSTLLNLLFVPDGSPMKVLAKALLRLDGLSHVLAWTRDPVLACKDPASLDFVELPRLRLRFEAKADGPGGKVRLHSLEHAGMFISGADGAEMTKLVEGLPSSLLLENSEKDRFLLLPSATLPGRPESKGTPFSGEVVLNRCDSWWLRCVGDGARHHLYPVHVSGCLLSTPSLSAALYLLVSRFVAGQYEQAFSMVEGCVTDLPLGKEEAGSLRWLGHLEHDHHPDAVSCRLKLSLAAAPC 2284
BLAST of mRNA_S-dermatodea_contig13276.1944.1 vs. uniprot
Match: A0A2R5FYY4_9STRA (Calmodulin n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5FYY4_9STRA) HSP 1 Score: 194 bits (492), Expect = 1.130e-52 Identity = 112/244 (45.90%), Postives = 145/244 (59.43%), Query Frame = 1
Query: 40 SGRAEESTLLNLLFVPDGSPMKTLAKALLRLDGLSHVLAWTRDPVLACKDAAALYFVELPRVRLRF--EAKADGVGGKV--RLHSLEHAGMFISGPEGAEMSRLVEGLPSSLILENSERDRFLLLPSATLPGRPESNGTAFSGEMVLNRCDPWWLRCVGGGARHHLYPVHVSCCLLSTPSLAAALYLLVSRFVAGQYDQVFSMVEGCVTDLPLGKEEAGSLRWLGHLEHDHHPDAVACRLKLSL 759
+G E TLLNLL P SP+K L+ LLR+D LSH+L WT V D + VELPRVRL F + + GG V +L S EH G+F+S + LV GLP +++LEN + + F+L+ + P RP F+ E+VLNR P W +G RH+LY VH+S L TP+L++ALYL + RF+A +YD F + + CVTD PL EE L LG L D HPDA ACRLKLSL
Sbjct: 1904 AGTEECHTLLNLLHAPASSPLKDLSSILLRVDNLSHILVWTFADVQTPSDVCRIDLVELPRVRLSFRLQEEVSQPGGPVDLKLFSQEHTGLFMSANRDPRIVDLVRGLPHAVLLENWKGELFILVAATAYPTRPVVPNMIFATELVLNRTSPEWNANLGD-VRHYLYSVHLSKMFLFTPTLSSALYLFLLRFMARRYDLAFRLADSCVTDTPLTAEEDQILDLLGSLNFDMHPDAHACRLKLSL 2146
BLAST of mRNA_S-dermatodea_contig13276.1944.1 vs. uniprot
Match: A0A835Z7Z7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7Z7_9STRA) HSP 1 Score: 192 bits (487), Expect = 5.240e-52 Identity = 109/242 (45.04%), Postives = 135/242 (55.79%), Query Frame = 1
Query: 61 TLLNLLFVPDGSPMKTLAKALLRLDGLSHVLAWTRDPVLACKDAAALYFVELPRVRLRFEAKADGVGGKVR----LHSLEHAGMFISGPEGAEMSRLVEGLPSSLILENSERDRFLLLPSATLPGRPESNGTAFSGEMVLNRCDPWWLRCVGGGARHHLYPVHVSCCLLSTPSLAAALYLLVSRFVAGQYDQVFSMVEGCVTDLPLGKEEAGSLRWLGHLEHDHHPDAVACRLKLSLAAAPC 774
TLLNLL+ GSP+ LA L RL+ SH+L WTR + + ++ ++ VELPR+RL F + L+S EH GM +S + LV LP+S+ILEN + +V NR D WL +G RH+LYPVH S +LSTPSLAAALYLL+ RF+A QY VFSMVE CVTDL L EEA WLG L DH PDAVACRL++S PC
Sbjct: 2826 TLLNLLYAAPGSPLHELAHVLTRLESPSHILVWTRQAINSPQEGGSIDLVELPRLRLTFSTLHTTGASSAKPVSLLYSHEHNGMHLSARRSGGLEHLVSCLPNSVILENDD--------------------------VVFNRGDARWLTALGNDVRHYLYPVHPSETMLSTPSLAAALYLLLMRFMARQYADVFSMVESCVTDLKLSPEEAQIFAWLGSLRGDHQPDAVACRLRISKLIGPC 3041
BLAST of mRNA_S-dermatodea_contig13276.1944.1 vs. uniprot
Match: A0A7S1U856_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U856_9STRA) HSP 1 Score: 178 bits (452), Expect = 9.310e-48 Identity = 101/244 (41.39%), Postives = 146/244 (59.84%), Query Frame = 1
Query: 46 RAEESTLLNLLFVPDGSP-MKTLAKALLRLDGLSHVLAWTRDPVLACKDAAALYFVELPRVRLRFEAKADGVGGKVRLHSLEHAGMFISG--PEGAEMSRLVEGLPSSLILENSERDRFLLLPSATLPGRPESNGTAFSGEMVLNRCDPWWLRCVGGGARHHLYPVHVSCCLLSTPSLAAALYLLVSRFVAGQYDQVFSMVEGCVTDLPLGKEEAGSLRWLGHLEHDHHPDAVACRLKLSLAAA 768
R TL+N+L+ P S + L LLRL+ LSH+L W+ A ++ +E+PR+RL F A+A G R EH+ +FI P+ A + RL+EGLP SL+LEN + D FLLLP+ TLP R FS +++L+R + WL + G +RH+++P+H + L+TP+LA+ALYL++ RF+A Y VF + + CV+D L EE L +D HPDA ACRLK+SLA +
Sbjct: 43 RRPTRTLINMLWAPQSSEILANLLHVLLRLENLSHILVWSEIEADDPGAATSVDLIEMPRLRLSFRAEATD--GPKRFMCREHSDLFICNKPPKCARLRRLLEGLPHSLVLENKDGDLFLLLPATTLPMRTVVQDAPFSTDLLLDRNNQAWLENMSG-SRHYVFPIHSTRLFLTTPTLASALYLMLCRFLARDYQAVFRLADSCVSDQQLNAEEEQIFEQLEFCNYDSHPDAHACRLKISLATS 283
BLAST of mRNA_S-dermatodea_contig13276.1944.1 vs. uniprot
Match: A0A7S3L4X5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L4X5_9STRA) HSP 1 Score: 171 bits (432), Expect = 4.590e-45 Identity = 103/238 (43.28%), Postives = 147/238 (61.76%), Query Frame = 1
Query: 61 TLLNLLFVPDGSPMKTLAKALLRLDGLSHVLAWTRDPVLACKDAAALYFVELPRVRLRFEAKAD-GVGGKV--RLHSLEHAGMFIS-GPEGAEMS-RLVEGLPSSLILENSERDRFLLLPSATLPGRPESNGTAFSGEMVLNRCDPWWLRCVGGGARHHLYPVHVSCCLLSTPSLAAALYLLVSRFVAGQYDQVFSMVEGCVTDLPLGKEEAGSLRWLGHLEHDHHPDAVACRLKLSL 759
TLLN+L P S +K + L RLD L+HVL W+ V + D A + +ELPRV LRF+AK + V G V RL+S ++ G++I+ E E+S RL+ + ++L+N ++D F+LLPS LP R +G+ S +++L+R + W+ +G R +LYP+H S L TPSLA++LYLL+ F+ G Y VF MVE CV++ L EE L L +D HPDA ACRLKLS+
Sbjct: 284 TLLNVLTAPPSSLLKRVGMLLSRLDNLAHVLIWSESEVASAHDPATIDLIELPRVNLRFKAKENKSVDGHVETRLYSNDYDGLYIATSTEAREISERLLGTVSHFIVLQNEDKDLFVLLPSCALPRRLHMDGSHLSVQVILDRRNQEWINNIGE-VRSYLYPIHNSRSFLVTPSLASSLYLLLMYFITGAYPDVFKMVESCVSE-QLTPEEQQIFNQLEFLGNDCHPDAHACRLKLSV 519
BLAST of mRNA_S-dermatodea_contig13276.1944.1 vs. uniprot
Match: A0A2E0ZET9_9CHLR (Uncharacterized protein (Fragment) n=1 Tax=Anaerolineaceae bacterium TaxID=2024896 RepID=A0A2E0ZET9_9CHLR) HSP 1 Score: 168 bits (426), Expect = 7.580e-44 Identity = 106/261 (40.61%), Postives = 154/261 (59.00%), Query Frame = 1
Query: 10 TARLSEGRESSG---RAEESTLLNLLFVPDGSPMKTLAKALLRLDGLSHVLAWTR-DPVLACKDAAA-----LYFVELPRVRLRFEAKADGVGGKVRLHSLEHAGMFISGPEGAEMSRLVEGLPSSLILENSERDRFLLLPSATLPGRPESNGTAFSGEMVLNRCDPWWLRCVGGGARHHLYPVHVSCCLLSTPSLAAALYLLVSRFVAGQYDQVFSMVEGCVTDLPLGKEEAGSLRWLGH--LEHDHHPDAVACRLKLSL 759
TA EG +S ++E +L+LL P+ S + +LA + R++ LSHVLAW R D + A LY V LPR++L F+A+ VGG V+L+S++HA +F++ E + L+ G+P SL+L NS + +L+PS RP FS E+VL+R D W+ + +++YPVHVS C ++P+LA+ALYLL+ RF+ QY V ++V+ +D L KEEA SL L D HPDA ACRLK+SL
Sbjct: 382 TADSGEGGAASASDIESDEMVMLDLLHAPEDSYLASLATLMARIENLSHVLAWARFDAATDLRSPTAVTHSDLYIVSLPRLKLTFQARK--VGGVVKLYSVDHADLFVTNERSEETTALLAGIPHSLLLSNSNGEVSVLVPSVPTI-RPMIRTIPFSTELVLDRSDSKWMAALENP--YYVYPVHVSLCFCASPTLASALYLLLLRFLNRQYHAVCTLVDTVSSDTDLTKEEANSLALLNSPKCSADCHPDAHACRLKISL 637
BLAST of mRNA_S-dermatodea_contig13276.1944.1 vs. uniprot
Match: A0A7S0MEC0_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0MEC0_9CRYP) HSP 1 Score: 163 bits (412), Expect = 8.980e-44 Identity = 90/240 (37.50%), Postives = 145/240 (60.42%), Query Frame = 1
Query: 49 AEESTLLNLLFVPDGSPMKTLAKALLRLDGLSHVLAWTRDPVLACKDAAALYFVELPRVRLRFEAKADGVGGKVRLHSLEHAGMFISGPEGAEMSRLVEGLPSSLILENSERDRFLLLPSATLPGRPESNGTAFSGEMVLNRCDPWWLRCVGGGARHHLYPVHVSCCLLSTPSLAAALYLLVSRFVAGQYDQVFSMVEGCVTDLPLGKEEAGSLRWLGHLEHDHHPDAVACRLKLSLAAA 768
++ TLLNLL P S + +A +++ L +VLAW++ ++ A+ +ELPR++L F+A + G++R + EHAG+FIS + L+ GLP +L+L N ++RF+L+ SA P +P + +F ++L+R D W+ + A+++LYP+HVS L P+L++ LYLLV RF + Y+++F M CV+D L KEE L ++ D HPDA+ACRLK+S+ A
Sbjct: 205 SQRLTLLNLLHAPGSSHLSKVAALFTKIESLGYVLAWSKSG----EEDMAVDLIELPRLKLSFKAIFED--GELRFYCREHAGLFISTESCPDSEILMRGLPCALLLTNHVKERFILVNSAVKPIKP-AQSVSFPSALLLDRQDRDWISNLS--AKYYLYPLHVSKRFLQIPTLSSMLYLLVLRFYSRNYEEIFKMANSCVSDTELSKEEMQIWDLLKYVVDDRHPDAIACRLKISIVTA 435
BLAST of mRNA_S-dermatodea_contig13276.1944.1 vs. uniprot
Match: A0A7S3QCT0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3QCT0_9STRA) HSP 1 Score: 167 bits (424), Expect = 1.370e-43 Identity = 94/237 (39.66%), Postives = 146/237 (61.60%), Query Frame = 1
Query: 61 TLLNLLFVPDGSPMKTLAKALLRLDGLSHVLAWTRDPVLACKDAAALYFVELPRVRLRFEAKA-DGVGGKV--RLHSLEHAGMFISGPEGAE--MSRLVEGLPSSLILENSERDRFLLLPSATLPGRPESNGTAFSGEMVLNRCDPWWLRCVGGGARHHLYPVHVSCCLLSTPSLAAALYLLVSRFVAGQYDQVFSMVEGCVTDLPLGKEEAGSLRWLGHLEHDHHPDAVACRLKLS 756
TLLN+ P S +K + L RLD L+H+L W++ V+ +D + + +E+PRV L F +K+ + + GK RL+S +H G++++ A + +L+ + ++L+NS+ D F+L+P LP R ++GTA S +++L+R + W+ +G R +LYPVH S L TPSLA+++YL+V F+ G Y VF MVE CV++ L EE L L +D+HPDA ACRLKLS
Sbjct: 1557 TLLNISSAPPSSLLKRVGMLLSRLDNLAHILVWSKSKVVRAEDGSNIDLIEMPRVNLSFVSKSIETIDGKTEHRLYSNDHNGLYVATSTEAREVVEKLLGSISHFIVLQNSDNDLFVLMPGCALPRRLNTDGTALSVQVILDRRNKEWIDNMGE-VRCYLYPVHNSQAFLFTPSLASSMYLMVMYFITGSYRDVFKMVESCVSET-LSAEEHQIFSQLEFLGNDYHPDAHACRLKLS 1791
BLAST of mRNA_S-dermatodea_contig13276.1944.1 vs. uniprot
Match: A0A7S1NNJ3_9EUGL (Hypothetical protein (Fragment) n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1NNJ3_9EUGL) HSP 1 Score: 166 bits (421), Expect = 3.230e-43 Identity = 102/239 (42.68%), Postives = 144/239 (60.25%), Query Frame = 1
Query: 79 FVPDGSPMKTLAKALLRLDGLSHVLAWTRDPVLACKDAAALYFVELPRVRLRFEAKA--DGVGGK--VRLHSLEHAGMFISGPEGAEMSRLVEGLPSSLILENSERDRFLLLPSATLPGRPE-------SNGTAFSGEMVLNRCDPWWLRCVGGGARHHLYPVHVSCCLLSTPSLAAALYLLVSRFVAGQYDQVFSMVEGCVTDLPLGKEEAGSLRWLGHLEHDHHPDAVACRLKLSLA 762
PDGS +K LA LLRLD LSH L WT++ A +A+ +ELPR+RL F A+ D GK VRL+SLEH G +I+ A + L++G+ + ++LE++ + + L+ + TLP R E S T ++VL+R + W+ +G RH++YP+H L TP+LA+ALYLL+ RF++ QY VF MV+ CVTD+ + +E L L D HPDA ACRLKLSLA
Sbjct: 1 MAPDGSYLKGLASLLLRLDNLSHCLVWTKNDENA---VSAIDIIELPRLRLTFHARTVLDEETGKQVVRLYSLEHEGRWITNRHDAMATTLLKGIQNVVLLEDAHGEVYALVSALTLPRRLEVRSSSVRSAYTLLPTDVVLDRSNLEWIEKLGD-QRHYIYPIHACKAFLFTPTLASALYLLLLRFISRQYAAVFCMVDSCVTDMSMNDDEYQIWDQLQFLNGDTHPDAHACRLKLSLA 235
BLAST of mRNA_S-dermatodea_contig13276.1944.1 vs. uniprot
Match: A0A7S2UI47_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UI47_9STRA) HSP 1 Score: 166 bits (421), Expect = 3.560e-43 Identity = 97/237 (40.93%), Postives = 147/237 (62.03%), Query Frame = 1
Query: 61 TLLNLLFVPDGSPMKTLAKALLRLDGLSHVLAWTRDPVLACKDAAALYFVELPRVRLRFEAK-ADGVGGKV--RLHSLEHAGMFIS-GPEGAEMS-RLVEGLPSSLILENSERDRFLLLPSATLPGRPESNGTAFSGEMVLNRCDPWWLRCVGGGARHHLYPVHVSCCLLSTPSLAAALYLLVSRFVAGQYDQVFSMVEGCVTDLPLGKEEAGSLRWLGHLEHDHHPDAVACRLKLS 756
TLLN+L P S +K + L RLD LSHVL W+ V + DA ++ +ELPRV+L F++K + + G+V R++S +H G++IS E E++ +L+ + ++L+N++ D F+L+P LP R +G+ S +++L+R + W+ +G R +LYPVH S L TPSLA+++YL+V F+ G Y VF MV+ CV++ L EE L L +D HPDA ACRLKLS
Sbjct: 1086 TLLNILSAPPSSLVKRIGMLLSRLDNLSHVLMWSSQKVQSAHDACSIDVIELPRVKLTFKSKRVESIDGRVEQRIYSNDHDGLYISTSTESREIAEKLLGSIAHFIVLQNADNDLFVLIPGCALPRRLHIDGSHLSVQIILDRRNQEWIDNIGE-VRCYLYPVHNSKSFLVTPSLASSMYLMVLYFITGSYRDVFKMVDSCVSE-ELTPEELQVFNQLEFLGNDFHPDAHACRLKLS 1320 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig13276.1944.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig13276.1944.1 >prot_S-dermatodea_contig13276.1944.1 ID=prot_S-dermatodea_contig13276.1944.1|Name=mRNA_S-dermatodea_contig13276.1944.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=258bp GKYTARLSEGRESSGRAEESTLLNLLFVPDGSPMKTLAKALLRLDGLSHVback to top mRNA from alignment at S-dermatodea_contig13276:2449..5791- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig13276.1944.1 ID=mRNA_S-dermatodea_contig13276.1944.1|Name=mRNA_S-dermatodea_contig13276.1944.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=3343bp|location=Sequence derived from alignment at S-dermatodea_contig13276:2449..5791- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig13276:2449..5791- >mRNA_S-dermatodea_contig13276.1944.1 ID=mRNA_S-dermatodea_contig13276.1944.1|Name=mRNA_S-dermatodea_contig13276.1944.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1548bp|location=Sequence derived from alignment at S-dermatodea_contig13276:2449..5791- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |