mRNA_S-dermatodea_contig13261.1938.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig13261.1938.1 vs. uniprot
Match: D7G2K6_ECTSI (P4Hc domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2K6_ECTSI) HSP 1 Score: 222 bits (566), Expect = 1.610e-70 Identity = 101/118 (85.59%), Postives = 109/118 (92.37%), Query Frame = 1
Query: 1 QVGRYYTTQKYANHWDAFDLATEDGRRFADNGGQRVCTVLVYLNDVASGGCTSFPRLGITVRPKKGMAVVFFPATLDGTLDPMLLHAAEPAVDTKWVSQIWIRQGTYHGTPSARIPRI 354
QVGRYYT+QKYANHWDAFDL TEDGRRFA NGGQRVCTVLVYLNDV SGGCT+FP+LG+ V+P+KGMAVVFFPATLDG LD LLHAAEPA+DTKWVSQIWIRQG YHGTP+ARIP I
Sbjct: 177 QVGRYYTSQKYANHWDAFDLNTEDGRRFAQNGGQRVCTVLVYLNDVPSGGCTAFPQLGMKVQPRKGMAVVFFPATLDGVLDSRLLHAAEPAIDTKWVSQIWIRQGAYHGTPTARIPAI 294
BLAST of mRNA_S-dermatodea_contig13261.1938.1 vs. uniprot
Match: A0A7S1UYE3_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UYE3_9STRA) HSP 1 Score: 179 bits (454), Expect = 2.310e-52 Identity = 82/120 (68.33%), Postives = 97/120 (80.83%), Query Frame = 1
Query: 1 QVGRYYTTQKYANHWDAFDLATEDGRRFADNGGQRVCTVLVYLNDVASGGCTSFPRLGITVRPKKGMAVVFFPATLDGTLDPMLLHAAEPAVDTKWVSQIWIRQGTYHGTPSARIPRI*G 360
QVGRY+ +Q+Y H+DAFDL+ EDGRRFA NGGQR TVLVYLNDV GG TSFP L + V+P++GMA+VFFPAT+DG LD M LHAA PAVDTK+VSQ+WIRQG Y G PS R+P+ G
Sbjct: 270 QVGRYFPSQQYLQHFDAFDLSNEDGRRFASNGGQRTVTVLVYLNDVHQGGATSFPALNLDVQPRRGMAIVFFPATVDGYLDKMALHAANPAVDTKYVSQVWIRQGEYKGQPSKRLPQTMG 389
BLAST of mRNA_S-dermatodea_contig13261.1938.1 vs. uniprot
Match: A0A835YJM0_9STRA (Fe2OG dioxygenase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJM0_9STRA) HSP 1 Score: 172 bits (436), Expect = 8.070e-52 Identity = 82/117 (70.09%), Postives = 93/117 (79.49%), Query Frame = 1
Query: 1 QVGRYYTTQKYANHWDAFDLATEDGRRFADNGGQRVCTVLVYLNDVASGGCTSFPRLGITVRPKKGMAVVFFPATLDGTLDPMLLHAAEPAVDTKWVSQIWIRQGTYHGTPSARIPR 351
QVGRY TQ YA H DAFDL T+DG RFA NGGQRV TVL+YLNDV GG TSFPRLG++V P++GMAVVFFP+TLDG D + LH AEPAVD K+VSQIWIRQG Y G P+ R+ R
Sbjct: 100 QVGRYLPTQFYAPHLDAFDLKTQDGMRFAQNGGQRVATVLIYLNDVPRGGNTSFPRLGLSVTPRRGMAVVFFPSTLDGCADELALHTAEPAVDVKYVSQIWIRQGLYTGEPTRRLLR 216
BLAST of mRNA_S-dermatodea_contig13261.1938.1 vs. uniprot
Match: A0A7S3KY14_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3KY14_9STRA) HSP 1 Score: 175 bits (444), Expect = 1.350e-50 Identity = 80/120 (66.67%), Postives = 96/120 (80.00%), Query Frame = 1
Query: 1 QVGRYYTTQKYANHWDAFDLATEDGRRFADNGGQRVCTVLVYLNDVASGGCTSFPRLGITVRPKKGMAVVFFPATLDGTLDPMLLHAAEPAVDTKWVSQIWIRQGTYHGTPSARIPRI*G 360
QVGRY +Q+Y H+DAFDL+TEDGRRFA NGGQR TVL+YLNDV GG T FP L + V+P +GMA++FFPAT+DG LD M LHAA PAVDTK+VSQ+WIRQG+Y+G PS R+P G
Sbjct: 280 QVGRYMASQQYLQHYDAFDLSTEDGRRFASNGGQRTITVLIYLNDVHQGGATRFPALNLDVQPVRGMALIFFPATIDGMLDQMSLHAALPAVDTKYVSQVWIRQGSYNGQPSKRLPATLG 399
BLAST of mRNA_S-dermatodea_contig13261.1938.1 vs. uniprot
Match: A0A6U0TVS1_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A6U0TVS1_9STRA) HSP 1 Score: 173 bits (438), Expect = 1.910e-50 Identity = 80/115 (69.57%), Postives = 95/115 (82.61%), Query Frame = 1
Query: 1 QVGRYYTTQKYANHWDAFDLATEDGRRFADNGGQRVCTVLVYLNDVASGGCTSFPRLGITVRPKKGMAVVFFPATLDGTLDPMLLHAAEPAVDTKWVSQIWIRQGTYHGTPSARI 345
QVGRY TQ+Y H+DAFDL++EDGRRFA NGGQR T+LVYLNDV++GG T FPRL I V+P++GMA+VFFPAT+DGTLD M LHAA PAVD K+VSQ+WIRQ Y G PS R+
Sbjct: 194 QVGRYLPTQQYLQHFDAFDLSSEDGRRFASNGGQRTITILVYLNDVSTGGNTVFPRLNIQVQPRRGMALVFFPATVDGTLDKMTLHAALPAVDVKYVSQVWIRQTNYDGVPSKRL 308
BLAST of mRNA_S-dermatodea_contig13261.1938.1 vs. uniprot
Match: A0A1Z5JHE4_FISSO (P4Hc domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JHE4_FISSO) HSP 1 Score: 170 bits (430), Expect = 2.050e-50 Identity = 77/120 (64.17%), Postives = 95/120 (79.17%), Query Frame = 1
Query: 1 QVGRYYTTQKYANHWDAFDLATEDGRRFADNGGQRVCTVLVYLNDVASGGCTSFPRLGITVRPKKGMAVVFFPATLDGTLDPMLLHAAEPAVDTKWVSQIWIRQGTYHGTPSARIPRI*G 360
QVGRY+ +KY H+DAFDL+TEDGRRFA NGGQR TVL+YLNDV GG T FP L + ++P++GMA+VFFPAT+DG LD M LHAA PA+DTK+VSQ+WIRQ Y+G PS R+ + G
Sbjct: 99 QVGRYFYQEKYLQHFDAFDLSTEDGRRFAANGGQRTVTVLIYLNDVMRGGATRFPALNLDIQPRRGMALVFFPATVDGMLDKMALHAALPAIDTKFVSQVWIRQSIYNGQPSKRLQQTLG 218
BLAST of mRNA_S-dermatodea_contig13261.1938.1 vs. uniprot
Match: A0A8J2S9J3_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2S9J3_9STRA) HSP 1 Score: 169 bits (427), Expect = 3.670e-50 Identity = 80/118 (67.80%), Postives = 93/118 (78.81%), Query Frame = 1
Query: 1 QVGRYYTTQKYANHWDAFDLATEDGRRFADNGGQRVCTVLVYLNDVASGGCTSFPRLGITVRPKKGMAVVFFPATLDGTLDPMLLHAAEPAVDTKWVSQIWIRQGTYHGTPSARIPRI 354
QVGRY + Y H+DAFD ++ DGRRFA NGGQRV TVLVYLNDVA GGCTSF +LG++++PKKG A+VFFPA+LDG LD LHAAEPA+D KWVSQIWIRQ Y+G S RI I
Sbjct: 124 QVGRYRGGEFYKAHYDAFDTSSPDGRRFAQNGGQRVATVLVYLNDVARGGCTSFSKLGLSIQPKKGTALVFFPASLDGMLDQHYLHAAEPALDLKWVSQIWIRQKAYNGLASVRIAPI 241
BLAST of mRNA_S-dermatodea_contig13261.1938.1 vs. uniprot
Match: A0A7S0CAB3_9STRA (Hypothetical protein n=2 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CAB3_9STRA) HSP 1 Score: 167 bits (424), Expect = 5.090e-49 Identity = 81/130 (62.31%), Postives = 100/130 (76.92%), Query Frame = 1
Query: 1 QVGRYYTTQKYANHWDAFDLATEDGRRFADNGGQRVCTVLVYLNDVA--SGGCTSFPRLG------ITVRPKKGMAVVFFPATLDGTLDPMLLHAAEPAVDTKWVSQIWIRQGTYHGTPSARIPRI*GKG 366
QVGRYY +Q+Y +H+DAFDL DGRRFA+NGGQRV TVLVYLND+A GGCT+FPRL + VRP++G A+VFFPA++DG LD LHAAEPA+DTK+VSQ+WIRQG Y G P+ R+ + G G
Sbjct: 102 QVGRYYPSQQYRSHYDAFDLDDVDGRRFAENGGQRVVTVLVYLNDLAVGRGGCTAFPRLKTSSGEVLRVRPERGKAIVFFPASVDGLLDTDALHAAEPALDTKYVSQVWIRQGEYKGVPTKRLASVHGSG 231
BLAST of mRNA_S-dermatodea_contig13261.1938.1 vs. uniprot
Match: A0A6U3RVV9_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3RVV9_9STRA) HSP 1 Score: 171 bits (433), Expect = 5.530e-49 Identity = 81/115 (70.43%), Postives = 93/115 (80.87%), Query Frame = 1
Query: 1 QVGRYYTTQKYANHWDAFDLATEDGRRFADNGGQRVCTVLVYLNDVASGGCTSFPRLGITVRPKKGMAVVFFPATLDGTLDPMLLHAAEPAVDTKWVSQIWIRQGTYHGTPSARI 345
QVGRY +Q+Y H+DAFDL+ EDGRRFA NGGQR TVLVYLNDV+ GG T+FP L I V+PK+GMA+VFFPAT+DG LD M LHAA PAVD K+VSQ+WIRQG Y G PS RI
Sbjct: 274 QVGRYLPSQQYLQHFDAFDLSNEDGRRFASNGGQRTVTVLVYLNDVSRGGQTAFPSLNIEVQPKQGMALVFFPATVDGYLDKMALHAALPAVDPKYVSQVWIRQGNYEGQPSKRI 388
BLAST of mRNA_S-dermatodea_contig13261.1938.1 vs. uniprot
Match: A0A7S2UA87_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UA87_9STRA) HSP 1 Score: 166 bits (421), Expect = 1.160e-48 Identity = 75/115 (65.22%), Postives = 91/115 (79.13%), Query Frame = 1
Query: 1 QVGRYYTTQKYANHWDAFDLATEDGRRFADNGGQRVCTVLVYLNDVASGGCTSFPRLGITVRPKKGMAVVFFPATLDGTLDPMLLHAAEPAVDTKWVSQIWIRQGTYHGTPSARI 345
Q+GRY +QKY H+DAFDL E GRRFA NGGQR TVL+YLNDV +GG T+FP L + V+P++GMA+VFFPAT+DG LD M LHAA PA+DTK+VSQ+WIRQG Y G PS +
Sbjct: 145 QIGRYLPSQKYLQHFDAFDLGDEHGRRFASNGGQRTVTVLLYLNDVMNGGHTTFPSLNLEVKPRRGMAIVFFPATIDGYLDKMALHAALPAIDTKFVSQVWIRQGNYEGQPSKHL 259 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig13261.1938.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig13261.1938.1 >prot_S-dermatodea_contig13261.1938.1 ID=prot_S-dermatodea_contig13261.1938.1|Name=mRNA_S-dermatodea_contig13261.1938.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=53bp MAVVFFPATLDGTLDPMLLHAAEPAVDTKWVSQIWIRQGTYHGTPSARIPback to top mRNA from alignment at S-dermatodea_contig13261:1940..2946+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig13261.1938.1 ID=mRNA_S-dermatodea_contig13261.1938.1|Name=mRNA_S-dermatodea_contig13261.1938.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=1007bp|location=Sequence derived from alignment at S-dermatodea_contig13261:1940..2946+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig13261:1940..2946+ >mRNA_S-dermatodea_contig13261.1938.1 ID=mRNA_S-dermatodea_contig13261.1938.1|Name=mRNA_S-dermatodea_contig13261.1938.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=318bp|location=Sequence derived from alignment at S-dermatodea_contig13261:1940..2946+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |