mRNA_S-dermatodea_contig13178.1898.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig13178.1898.1 vs. uniprot
Match: D8LLT9_ECTSI (Plus3 domain-containing protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLT9_ECTSI) HSP 1 Score: 128 bits (322), Expect = 2.420e-31 Identity = 58/64 (90.62%), Postives = 63/64 (98.44%), Query Frame = 1
Query: 394 VLEDINRCRVPRDYLEKWANEPYFEKAVQGCFVRVARGVGRAGERLYVMAEIVGVAPYKRRYKM 585
VLEDINRCRVPRDYLE+WANEPYFEKAVQGCFVRVARGVGR+GER+YVMAEIVGV PYKR+YK+
Sbjct: 239 VLEDINRCRVPRDYLERWANEPYFEKAVQGCFVRVARGVGRSGERVYVMAEIVGVGPYKRKYKI 302
BLAST of mRNA_S-dermatodea_contig13178.1898.1 vs. uniprot
Match: A0A6H5JFI3_9PHAE (Plus3 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFI3_9PHAE) HSP 1 Score: 128 bits (322), Expect = 7.400e-31 Identity = 58/64 (90.62%), Postives = 63/64 (98.44%), Query Frame = 1
Query: 394 VLEDINRCRVPRDYLEKWANEPYFEKAVQGCFVRVARGVGRAGERLYVMAEIVGVAPYKRRYKM 585
VLEDINRCRVPRDYLE+WANEPYFEKAVQGCFVRVARGVGR+GER+YVMAEIVGV PYKR+YK+
Sbjct: 539 VLEDINRCRVPRDYLERWANEPYFEKAVQGCFVRVARGVGRSGERVYVMAEIVGVGPYKRKYKI 602
BLAST of mRNA_S-dermatodea_contig13178.1898.1 vs. uniprot
Match: A0A836CH32_9STRA (Plus-3 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CH32_9STRA) HSP 1 Score: 67.4 bits (163), Expect = 1.240e-9 Identity = 34/77 (44.16%), Postives = 47/77 (61.04%), Query Frame = 1
Query: 397 LEDINRCRVPRDYLEKWANEPYFEKAVQGCFVRVARGVGRAGERLYVM--------------AEIVGVAPYKRRYKM 585
L DIN CRVPR+ LEKW NEP+F++A++GCFV++ G+ R + +Y M E+ GV YKR+Y M
Sbjct: 451 LNDINMCRVPRENLEKWLNEPFFDEALKGCFVKLGVGM-RNNQAVYRMLRXXXXXXXXXXXXCEVEGVTKYKRQYTM 526
BLAST of mRNA_S-dermatodea_contig13178.1898.1 vs. uniprot
Match: A0A7S4EA53_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4EA53_9STRA) HSP 1 Score: 65.9 bits (159), Expect = 1.420e-9 Identity = 33/64 (51.56%), Postives = 42/64 (65.62%), Query Frame = 1
Query: 406 INRCRVPRDYLEKWANEPYFEKAVQGCFVRVARGVGRA----GERLYVMAEIVGVAPYKRRYKM 585
IN+ R+PR LEKW EP+F+ AV GCFVR+ GVG+A GE Y + EI+GV YK Y +
Sbjct: 146 INKLRLPRKLLEKWVEEPFFDTAVVGCFVRL--GVGKAPGLRGEPQYKVCEIIGVGEYKHSYAL 207
BLAST of mRNA_S-dermatodea_contig13178.1898.1 vs. uniprot
Match: A0A7S4A0N2_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A0N2_9STRA) HSP 1 Score: 65.9 bits (159), Expect = 2.490e-9 Identity = 33/64 (51.56%), Postives = 42/64 (65.62%), Query Frame = 1
Query: 406 INRCRVPRDYLEKWANEPYFEKAVQGCFVRVARGVGRA----GERLYVMAEIVGVAPYKRRYKM 585
IN+ R+PR LEKW EP+F+ AV GCFVR+ GVG+A GE Y + EI+GV YK Y +
Sbjct: 146 INKLRLPRKLLEKWVEEPFFDTAVVGCFVRL--GVGKAPGLRGEPQYKVCEIIGVGEYKHSYAL 207
BLAST of mRNA_S-dermatodea_contig13178.1898.1 vs. uniprot
Match: F0YLG6_AURAN (Plus3 domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YLG6_AURAN) HSP 1 Score: 65.1 bits (157), Expect = 3.020e-9 Identity = 32/62 (51.61%), Postives = 41/62 (66.13%), Query Frame = 1
Query: 406 INRCRVPRDYLEKWANEPYFEKAVQGCFVRVARGVGRA----GERLYVMAEIVGVAPYKRRY 579
I + R+PR LEKW EP+FEKAV GC+VR+ G+G+A GE Y + EI+GV YK Y
Sbjct: 145 IGKLRLPRSLLEKWVEEPFFEKAVIGCYVRL--GIGKAPGPHGEAQYKVCEIIGVEEYKHSY 204
BLAST of mRNA_S-dermatodea_contig13178.1898.1 vs. uniprot
Match: A0A7S4A086_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A086_9STRA) HSP 1 Score: 65.9 bits (159), Expect = 3.380e-9 Identity = 33/64 (51.56%), Postives = 42/64 (65.62%), Query Frame = 1
Query: 406 INRCRVPRDYLEKWANEPYFEKAVQGCFVRVARGVGRA----GERLYVMAEIVGVAPYKRRYKM 585
IN+ R+PR LEKW EP+F+ AV GCFVR+ GVG+A GE Y + EI+GV YK Y +
Sbjct: 146 INKLRLPRKLLEKWVEEPFFDTAVVGCFVRL--GVGKAPGLRGEPQYKVCEIIGVGEYKHSYAL 207
BLAST of mRNA_S-dermatodea_contig13178.1898.1 vs. uniprot
Match: A0A7S4A040_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A040_9STRA) HSP 1 Score: 65.9 bits (159), Expect = 3.780e-9 Identity = 33/64 (51.56%), Postives = 42/64 (65.62%), Query Frame = 1
Query: 406 INRCRVPRDYLEKWANEPYFEKAVQGCFVRVARGVGRA----GERLYVMAEIVGVAPYKRRYKM 585
IN+ R+PR LEKW EP+F+ AV GCFVR+ GVG+A GE Y + EI+GV YK Y +
Sbjct: 146 INKLRLPRKLLEKWVEEPFFDTAVVGCFVRL--GVGKAPGLRGEPQYKVCEIIGVGEYKHSYAL 207
BLAST of mRNA_S-dermatodea_contig13178.1898.1 vs. uniprot
Match: A0A7S0P3F7_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0P3F7_9EUKA) HSP 1 Score: 63.2 bits (152), Expect = 2.550e-8 Identity = 27/63 (42.86%), Postives = 43/63 (68.25%), Query Frame = 1
Query: 397 LEDINRCRVPRDYLEKWANEPYFEKAVQGCFVRVARGVGRAGERLYVMAEIVGVAPYKRRYKM 585
L D+ + R+PR LE+W EPYFE V+GC VR+ G+ + G+++Y +AE+V V ++ YK+
Sbjct: 167 LSDLEKIRLPRQRLEQWQTEPYFESVVRGCLVRI--GLDQMGKKMYRVAEVVAVEERQQSYKL 227
BLAST of mRNA_S-dermatodea_contig13178.1898.1 vs. uniprot
Match: A0A7S4BIC5_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4BIC5_CHRCT) HSP 1 Score: 63.2 bits (152), Expect = 3.290e-8 Identity = 31/63 (49.21%), Postives = 44/63 (69.84%), Query Frame = 1
Query: 400 EDINRCRVPRDYLEKWANEPYFEKAVQGCFVRVARGVGRAGER-LYVMAEIVGVAPYKRRYKM 585
E++ R R+ R +EKW EPYFEK V GCFVR+ G+G+A ER +Y +AE++GV + Y+M
Sbjct: 264 EELERIRLTRSKIEKWLVEPYFEKVVVGCFVRL--GIGKANERPIYRVAEVMGVKDGYKPYRM 324 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig13178.1898.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 19
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig13178.1898.1 >prot_S-dermatodea_contig13178.1898.1 ID=prot_S-dermatodea_contig13178.1898.1|Name=mRNA_S-dermatodea_contig13178.1898.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=198bp DDDNFNKRAGSSSNADGDRGGGGGPSSSSRRRRSRSRSSSDDSYEDSRRRback to top mRNA from alignment at S-dermatodea_contig13178:5857..6486+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig13178.1898.1 ID=mRNA_S-dermatodea_contig13178.1898.1|Name=mRNA_S-dermatodea_contig13178.1898.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=630bp|location=Sequence derived from alignment at S-dermatodea_contig13178:5857..6486+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig13178:5857..6486+ >mRNA_S-dermatodea_contig13178.1898.1 ID=mRNA_S-dermatodea_contig13178.1898.1|Name=mRNA_S-dermatodea_contig13178.1898.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1188bp|location=Sequence derived from alignment at S-dermatodea_contig13178:5857..6486+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |