prot_S-dermatodea_contig13178.1898.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig13178.1898.1
Unique Nameprot_S-dermatodea_contig13178.1898.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length198
Homology
BLAST of mRNA_S-dermatodea_contig13178.1898.1 vs. uniprot
Match: D8LLT9_ECTSI (Plus3 domain-containing protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLT9_ECTSI)

HSP 1 Score: 128 bits (322), Expect = 2.420e-31
Identity = 58/64 (90.62%), Postives = 63/64 (98.44%), Query Frame = 0
Query:  132 VLEDINRCRVPRDYLEKWANEPYFEKAVQGCFVRVARGVGRAGERLYVMAEIVGVAPYKRRYKM 195
            VLEDINRCRVPRDYLE+WANEPYFEKAVQGCFVRVARGVGR+GER+YVMAEIVGV PYKR+YK+
Sbjct:  239 VLEDINRCRVPRDYLERWANEPYFEKAVQGCFVRVARGVGRSGERVYVMAEIVGVGPYKRKYKI 302          
BLAST of mRNA_S-dermatodea_contig13178.1898.1 vs. uniprot
Match: A0A6H5JFI3_9PHAE (Plus3 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFI3_9PHAE)

HSP 1 Score: 128 bits (322), Expect = 7.400e-31
Identity = 58/64 (90.62%), Postives = 63/64 (98.44%), Query Frame = 0
Query:  132 VLEDINRCRVPRDYLEKWANEPYFEKAVQGCFVRVARGVGRAGERLYVMAEIVGVAPYKRRYKM 195
            VLEDINRCRVPRDYLE+WANEPYFEKAVQGCFVRVARGVGR+GER+YVMAEIVGV PYKR+YK+
Sbjct:  539 VLEDINRCRVPRDYLERWANEPYFEKAVQGCFVRVARGVGRSGERVYVMAEIVGVGPYKRKYKI 602          
BLAST of mRNA_S-dermatodea_contig13178.1898.1 vs. uniprot
Match: A0A836CH32_9STRA (Plus-3 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CH32_9STRA)

HSP 1 Score: 67.4 bits (163), Expect = 1.240e-9
Identity = 34/77 (44.16%), Postives = 47/77 (61.04%), Query Frame = 0
Query:  133 LEDINRCRVPRDYLEKWANEPYFEKAVQGCFVRVARGVGRAGERLYVM--------------AEIVGVAPYKRRYKM 195
            L DIN CRVPR+ LEKW NEP+F++A++GCFV++  G+ R  + +Y M               E+ GV  YKR+Y M
Sbjct:  451 LNDINMCRVPRENLEKWLNEPFFDEALKGCFVKLGVGM-RNNQAVYRMLRXXXXXXXXXXXXCEVEGVTKYKRQYTM 526          
BLAST of mRNA_S-dermatodea_contig13178.1898.1 vs. uniprot
Match: A0A7S4EA53_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4EA53_9STRA)

HSP 1 Score: 65.9 bits (159), Expect = 1.420e-9
Identity = 33/64 (51.56%), Postives = 42/64 (65.62%), Query Frame = 0
Query:  136 INRCRVPRDYLEKWANEPYFEKAVQGCFVRVARGVGRA----GERLYVMAEIVGVAPYKRRYKM 195
            IN+ R+PR  LEKW  EP+F+ AV GCFVR+  GVG+A    GE  Y + EI+GV  YK  Y +
Sbjct:  146 INKLRLPRKLLEKWVEEPFFDTAVVGCFVRL--GVGKAPGLRGEPQYKVCEIIGVGEYKHSYAL 207          
BLAST of mRNA_S-dermatodea_contig13178.1898.1 vs. uniprot
Match: A0A7S4A0N2_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A0N2_9STRA)

HSP 1 Score: 65.9 bits (159), Expect = 2.490e-9
Identity = 33/64 (51.56%), Postives = 42/64 (65.62%), Query Frame = 0
Query:  136 INRCRVPRDYLEKWANEPYFEKAVQGCFVRVARGVGRA----GERLYVMAEIVGVAPYKRRYKM 195
            IN+ R+PR  LEKW  EP+F+ AV GCFVR+  GVG+A    GE  Y + EI+GV  YK  Y +
Sbjct:  146 INKLRLPRKLLEKWVEEPFFDTAVVGCFVRL--GVGKAPGLRGEPQYKVCEIIGVGEYKHSYAL 207          
BLAST of mRNA_S-dermatodea_contig13178.1898.1 vs. uniprot
Match: F0YLG6_AURAN (Plus3 domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YLG6_AURAN)

HSP 1 Score: 65.1 bits (157), Expect = 3.020e-9
Identity = 32/62 (51.61%), Postives = 41/62 (66.13%), Query Frame = 0
Query:  136 INRCRVPRDYLEKWANEPYFEKAVQGCFVRVARGVGRA----GERLYVMAEIVGVAPYKRRY 193
            I + R+PR  LEKW  EP+FEKAV GC+VR+  G+G+A    GE  Y + EI+GV  YK  Y
Sbjct:  145 IGKLRLPRSLLEKWVEEPFFEKAVIGCYVRL--GIGKAPGPHGEAQYKVCEIIGVEEYKHSY 204          
BLAST of mRNA_S-dermatodea_contig13178.1898.1 vs. uniprot
Match: A0A7S4A086_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A086_9STRA)

HSP 1 Score: 65.9 bits (159), Expect = 3.380e-9
Identity = 33/64 (51.56%), Postives = 42/64 (65.62%), Query Frame = 0
Query:  136 INRCRVPRDYLEKWANEPYFEKAVQGCFVRVARGVGRA----GERLYVMAEIVGVAPYKRRYKM 195
            IN+ R+PR  LEKW  EP+F+ AV GCFVR+  GVG+A    GE  Y + EI+GV  YK  Y +
Sbjct:  146 INKLRLPRKLLEKWVEEPFFDTAVVGCFVRL--GVGKAPGLRGEPQYKVCEIIGVGEYKHSYAL 207          
BLAST of mRNA_S-dermatodea_contig13178.1898.1 vs. uniprot
Match: A0A7S4A040_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A040_9STRA)

HSP 1 Score: 65.9 bits (159), Expect = 3.780e-9
Identity = 33/64 (51.56%), Postives = 42/64 (65.62%), Query Frame = 0
Query:  136 INRCRVPRDYLEKWANEPYFEKAVQGCFVRVARGVGRA----GERLYVMAEIVGVAPYKRRYKM 195
            IN+ R+PR  LEKW  EP+F+ AV GCFVR+  GVG+A    GE  Y + EI+GV  YK  Y +
Sbjct:  146 INKLRLPRKLLEKWVEEPFFDTAVVGCFVRL--GVGKAPGLRGEPQYKVCEIIGVGEYKHSYAL 207          
BLAST of mRNA_S-dermatodea_contig13178.1898.1 vs. uniprot
Match: A0A7S0P3F7_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0P3F7_9EUKA)

HSP 1 Score: 63.2 bits (152), Expect = 2.550e-8
Identity = 27/63 (42.86%), Postives = 43/63 (68.25%), Query Frame = 0
Query:  133 LEDINRCRVPRDYLEKWANEPYFEKAVQGCFVRVARGVGRAGERLYVMAEIVGVAPYKRRYKM 195
            L D+ + R+PR  LE+W  EPYFE  V+GC VR+  G+ + G+++Y +AE+V V   ++ YK+
Sbjct:  167 LSDLEKIRLPRQRLEQWQTEPYFESVVRGCLVRI--GLDQMGKKMYRVAEVVAVEERQQSYKL 227          
BLAST of mRNA_S-dermatodea_contig13178.1898.1 vs. uniprot
Match: A0A7S4BIC5_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4BIC5_CHRCT)

HSP 1 Score: 63.2 bits (152), Expect = 3.290e-8
Identity = 31/63 (49.21%), Postives = 44/63 (69.84%), Query Frame = 0
Query:  134 EDINRCRVPRDYLEKWANEPYFEKAVQGCFVRVARGVGRAGER-LYVMAEIVGVAPYKRRYKM 195
            E++ R R+ R  +EKW  EPYFEK V GCFVR+  G+G+A ER +Y +AE++GV    + Y+M
Sbjct:  264 EELERIRLTRSKIEKWLVEPYFEKVVVGCFVRL--GIGKANERPIYRVAEVMGVKDGYKPYRM 324          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig13178.1898.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 19
Match NameE-valueIdentityDescription
D8LLT9_ECTSI2.420e-3190.63Plus3 domain-containing protein (Fragment) n=1 Tax... [more]
A0A6H5JFI3_9PHAE7.400e-3190.63Plus3 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A836CH32_9STRA1.240e-944.16Plus-3 domain-containing protein n=1 Tax=Tribonema... [more]
A0A7S4EA53_9STRA1.420e-951.56Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S4A0N2_9STRA2.490e-951.56Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
F0YLG6_AURAN3.020e-951.61Plus3 domain-containing protein n=1 Tax=Aureococcu... [more]
A0A7S4A086_9STRA3.380e-951.56Hypothetical protein n=2 Tax=Pelagomonas calceolat... [more]
A0A7S4A040_9STRA3.780e-951.56Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S0P3F7_9EUKA2.550e-842.86Hypothetical protein n=1 Tax=Calcidiscus leptoporu... [more]
A0A7S4BIC5_CHRCT3.290e-849.21Hypothetical protein n=1 Tax=Chrysotila carterae T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004343Plus-3 domainPFAMPF03126Plus-3coord: 135..195
e-value: 7.3E-16
score: 58.6
IPR004343Plus-3 domainPROSITEPS51360PLUS3coord: 130..197
score: 21.495
IPR036128Plus3-like superfamilyGENE3D2.170.260.30coord: 128..197
e-value: 3.0E-18
score: 67.8
IPR036128Plus3-like superfamilySUPERFAMILY159042Plus3-likecoord: 132..195
NoneNo IPR availablePANTHERPTHR13115UNCHARACTERIZEDcoord: 28..195
NoneNo IPR availablePANTHERPTHR13115:SF8RNA POLYMERASE-ASSOCIATED PROTEIN RTF1 HOMOLOGcoord: 28..195

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig13178contigS-dermatodea_contig13178:5857..6486 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig13178.1898.1mRNA_S-dermatodea_contig13178.1898.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig13178 5857..6486 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig13178.1898.1 ID=prot_S-dermatodea_contig13178.1898.1|Name=mRNA_S-dermatodea_contig13178.1898.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=198bp
DDDNFNKRAGSSSNADGDRGGGGGPSSSSRRRRSRSRSSSDDSYEDSRRR
SRGGGGASSSGGGNRDRYRRSRRSRSRDRDRDRRRGARGSSRSRSRSRSG
ERGRHGEGRGRGGGGGGGGMERRAPEPEPEPVLEDINRCRVPRDYLEKWA
NEPYFEKAVQGCFVRVARGVGRAGERLYVMAEIVGVAPYKRRYKMVS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004343Plus-3_dom
IPR036128Plus3-like_sf