mRNA_S-dermatodea_contig1313.1878.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig1313.1878.1 vs. uniprot
Match: A0A6H5KLS4_9PHAE (Cofac_haem_bdg domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KLS4_9PHAE) HSP 1 Score: 115 bits (287), Expect = 4.300e-29 Identity = 51/61 (83.61%), Postives = 55/61 (90.16%), Query Frame = 1
Query: 7 LDRYIFDHGDLRTLKQDTKWDETWGFDFNQYAKIFRYARENGIRLVGLNAPASLLYLVNKV 189
LDRY++ HGDL LK DTKWDETWGFDFNQYAKIF YARENGIRLVGLNAP SLL+L+NKV
Sbjct: 177 LDRYVYSHGDLAALKLDTKWDETWGFDFNQYAKIFHYARENGIRLVGLNAPQSLLHLINKV 237
BLAST of mRNA_S-dermatodea_contig1313.1878.1 vs. uniprot
Match: A0A836CAW1_9STRA (Cofac_haem_bdg domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAW1_9STRA) HSP 1 Score: 89.4 bits (220), Expect = 1.960e-19 Identity = 38/62 (61.29%), Postives = 48/62 (77.42%), Query Frame = 1
Query: 1 MPLDRYIFDHGDLRTLKQDTKWDETWGFDFNQYAKIFRYARENGIRLVGLNAPASLLYLVNK 186
+ LDRY+F HG L LK +T WD+ WG+DFN Y KIFR+AR NG+RLVGLNAP L+ +V+K
Sbjct: 200 LALDRYVFRHGSLGRLKLETGWDDMWGYDFNNYTKIFRFARLNGVRLVGLNAPIQLVSMVSK 261
BLAST of mRNA_S-dermatodea_contig1313.1878.1 vs. uniprot
Match: A0A7S0EKS4_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0EKS4_9EUKA) HSP 1 Score: 72.0 bits (175), Expect = 1.500e-14 Identity = 31/58 (53.45%), Postives = 39/58 (67.24%), Query Frame = 1
Query: 7 LDRYIFDHGDLRTLKQDTKWDETWGFDFNQYAKIFRYARENGIRLVGLNAPASLLYLV 180
LD ++F G LK+ T+W TWG+DFNQYAKI YAR + I+LVGLN P L+ V
Sbjct: 58 LDAFVFQDGSFANLKKRTRWASTWGYDFNQYAKILAYARRHSIQLVGLNVPFGLVNAV 115
BLAST of mRNA_S-dermatodea_contig1313.1878.1 vs. uniprot
Match: W7U433_9STRA (Cofac_haem_bdg domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U433_9STRA) HSP 1 Score: 75.1 bits (183), Expect = 2.640e-14 Identity = 32/61 (52.46%), Postives = 44/61 (72.13%), Query Frame = 1
Query: 7 LDRYIFDHGDLRTLKQDTKWDETWGFDFNQYAKIFRYARENGIRLVGLNAPASLLYLVNKV 189
LD Y+F G L +LK+DTKWD+TWG YAKIF+YA+ +GIRL GLN P ++ +V ++
Sbjct: 178 LDDYVFGKGTLASLKEDTKWDKTWGHKMASYAKIFQYAKAHGIRLCGLNVPQPVVQVVRQM 238
BLAST of mRNA_S-dermatodea_contig1313.1878.1 vs. uniprot
Match: A0A5J4YW85_PORPP (Cofac_haem_bdg domain-containing protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YW85_PORPP) HSP 1 Score: 70.1 bits (170), Expect = 1.790e-12 Identity = 31/58 (53.45%), Postives = 40/58 (68.97%), Query Frame = 1
Query: 7 LDRYIFDHGDLRTLKQDTKWDETWGFDFNQYAKIFRYARENGIRLVGLNAPASLLYLV 180
LD Y++ L LK+ TKWDE WG DFN + IF YAR++GIRLVGLN P+ + +V
Sbjct: 258 LDDYVYGRIGLNKLKERTKWDEMWGHDFNFWLPIFAYARQHGIRLVGLNLPSKAVQIV 315
BLAST of mRNA_S-dermatodea_contig1313.1878.1 vs. uniprot
Match: A0A0M2PWR0_PROHO (Cofac_haem_bdg domain-containing protein n=2 Tax=Prochlorothrix hollandica TaxID=1223 RepID=A0A0M2PWR0_PROHO) HSP 1 Score: 56.6 bits (135), Expect = 9.190e-8 Identity = 22/54 (40.74%), Postives = 37/54 (68.52%), Query Frame = 1
Query: 7 LDRYIFDHGDLRTLKQDTKWDETWGFDFNQYAKIFRYARENGIRLVGLNAPASL 168
+DRY+ D +L++DT++DE WGFD+ YA + R+A+ GI+++ LN P +
Sbjct: 76 IDRYLAGSIDETSLRRDTEYDERWGFDWELYAPLLRFAQAQGIKVLALNTPTEI 129
BLAST of mRNA_S-dermatodea_contig1313.1878.1 vs. uniprot
Match: A0A3C1BQH1_9BACT (Iron-regulated protein n=1 Tax=Deferribacteraceae bacterium TaxID=2053543 RepID=A0A3C1BQH1_9BACT) HSP 1 Score: 54.3 bits (129), Expect = 6.200e-7 Identity = 25/52 (48.08%), Postives = 35/52 (67.31%), Query Frame = 1
Query: 7 LDRYIFDHGDLRTLKQDTKWDETWGFDFNQYAKIFRYARENGIRLVGLNAPA 162
LD YI D RT+ + T++ + W +D++ Y I YARENGIR++ LNAPA
Sbjct: 48 LDDYIEGVIDERTMLEKTEYYKRWRYDYHLYKPILTYARENGIRIIALNAPA 99
BLAST of mRNA_S-dermatodea_contig1313.1878.1 vs. uniprot
Match: A0A522Z0Y3_9BACT (Cofac_haem_bdg domain-containing protein n=1 Tax=bacterium TaxID=1869227 RepID=A0A522Z0Y3_9BACT) HSP 1 Score: 53.9 bits (128), Expect = 8.310e-7 Identity = 20/36 (55.56%), Postives = 28/36 (77.78%), Query Frame = 1
Query: 64 WDETWGFDFNQYAKIFRYARENGIRLVGLNAPASLL 171
W + WG+DF YA + RYA+ NG+R+VGLNAP +L+
Sbjct: 114 WKKAWGYDFAMYAPLLRYAKANGLRIVGLNAPRALV 149
BLAST of mRNA_S-dermatodea_contig1313.1878.1 vs. uniprot
Match: A0A1G0G5P0_9GAMM (Cofac_haem_bdg domain-containing protein n=1 Tax=Gammaproteobacteria bacterium RBG_16_51_14 TaxID=1798265 RepID=A0A1G0G5P0_9GAMM) HSP 1 Score: 53.1 bits (126), Expect = 1.640e-6 Identity = 23/61 (37.70%), Postives = 35/61 (57.38%), Query Frame = 1
Query: 7 LDRYIFDHGDLRTLKQDTKWDETWGFDFNQYAKIFRYARENGIRLVGLNAPASLLYLVNKV 189
L R++ ++KW E W DF+ Y + +ARENGI ++GLN P SL++ V K+
Sbjct: 121 LRRWVAGESTEAEFLSESKWKEHWNVDFDYYRPLLLFARENGIPVIGLNVPKSLVHAVAKM 181
BLAST of mRNA_S-dermatodea_contig1313.1878.1 vs. uniprot
Match: A0A0G4GP38_9ALVE (Cofac_haem_bdg domain-containing protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4GP38_9ALVE) HSP 1 Score: 52.8 bits (125), Expect = 2.370e-6 Identity = 26/58 (44.83%), Postives = 31/58 (53.45%), Query Frame = 1
Query: 7 LDRYIFDHGDLRTLKQDTKWDETWGFDFNQYAKIFRYARENGIRLVGLNAPASLLYLV 180
LD Y + Q+ WD TW +D Y IF YA+ NGIRLVGLN P + LV
Sbjct: 213 LDDYTGSSMPFAQVVQNLDWDNTWRYDPQMYYPIFDYAKNNGIRLVGLNIPEVFVSLV 270 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig1313.1878.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig1313.1878.1 >prot_S-dermatodea_contig1313.1878.1 ID=prot_S-dermatodea_contig1313.1878.1|Name=mRNA_S-dermatodea_contig1313.1878.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=67bp MPLDRYIFDHGDLRTLKQDTKWDETWGFDFNQYAKIFRYARENGIRLVGLback to top mRNA from alignment at S-dermatodea_contig1313:20575..20775+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig1313.1878.1 ID=mRNA_S-dermatodea_contig1313.1878.1|Name=mRNA_S-dermatodea_contig1313.1878.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=201bp|location=Sequence derived from alignment at S-dermatodea_contig1313:20575..20775+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig1313:20575..20775+ >mRNA_S-dermatodea_contig1313.1878.1 ID=mRNA_S-dermatodea_contig1313.1878.1|Name=mRNA_S-dermatodea_contig1313.1878.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=402bp|location=Sequence derived from alignment at S-dermatodea_contig1313:20575..20775+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |