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Homology
BLAST of mRNA_S-dermatodea_contig1303.1833.1 vs. uniprot
Match: D8LQ54_ECTSI (Similar to leucine rich repeat containing 44 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQ54_ECTSI) HSP 1 Score: 1169 bits (3024), Expect = 0.000e+0 Identity = 741/1496 (49.53%), Postives = 921/1496 (61.56%), Query Frame = 1
Query: 1 QVMEWQAAGSLSTAPRLTYLTMFSNPICKRKMYRTFVTNCCECLRGLDLHAVSDEEVIDGLVFFEASRYRACSVGLAIPQPLFKGLTEATFSPIQEE-------------ITEIGNTLKERDANAVVATRPRA--FVLASISRRVGLLIKFHARNSPVIISQRRARILLRNKRCAXXXXXXXXXXRKRILRQRVVDDLTSILKQNGELYLVQEMMTPAQVRTLIWFQRRIVGRFRLKFVSNCAQTLNRFMGSMVQRFSAFVVCLERAQAGGVVVASDAAGELAAAVARASMVATAGLSWEEAAEKTATMVTPVPGCKLIRRFSYVDMPDWPILEEDITTDGVFVTRSAKGGGRVCTDLP-----QETSLSSDEAMHGLVRTLSDHRGHRTRSCLRTGIYGNPRVRECLISRRGAFVQRIYRRSPAMGRDALSTGALRSHEQLWVFRTENTRVLARVLCTLRHSPPGKRPVPCLLERHLFRCAAATRIQAAWRGHVLRWNLLETLVSCLIVGRAGICIQRWWRNMTGLRARLCLGRRLWALASTVFCPTMYMELDVYCTLVRGWRQPEGEDSVAFVFQDGLRVA---SVNYPPS--YPHENEVPYFGRGNLEGRPCGEPSAEGVAETPGIREFPIWARHRVVPHISPLEV-QGPILRQIGALLTEGVQAKRVVWPVAAATTDREIKSSVPGDLFE----AIVGRTCNHLGTSSK-------FTSGGSSE------------------ENGSPVDFEGHYGG-VDLLELTFSSTQEARARALLVVLATEESGVLPNRPAAQLMTLGMLRRAAAGEPGHASPTLSVPAKGYEKGDSVEVSVLRLIEGRCGSWFPGTIDQKIGNGTAYKVTLDNGWVEPQVPHNCLRPYDRMGKEMALVEMSHLPSRWRREARSVLTPADRLEMELLYRSL-TPTAEHGAVRSLLREDTHRHESLLTLSPCADVSSPEGIAVDELDRFNGLNGRVL-------LRPESPVLRME----SPPVPRWAGSHTMSTARKAGGLAAEALEKVATVVAAADEAVATSTWVPGNRFKRNLEKLVHLAAFESQNAAEERELTARREAVVRAKSVEHAEPTPRDRLERLKAAEVAIFRREADERRCKAVLNNALDRANRVANAAEAKECVRDTKELTDSCAKARRIKQIAESKQREDEVKYERDMSLEKRNVDVQIAKARAFTRRVSREKQALCRAESNTFTANASQLARHVGKYSTISSKANAVGNKRRWVKGQQRHKEEMRRRMLKRVQELQEMKSRNERSRQRRTLAARGRARAIMDEAVLSHRLGQPNLSGNDVFTDEVVQVLRPSSR---PDGQLAPPGNREEGGAKDSSGFGPW-RGEGGFRRGRQGSFRFARNAHDTAIATAPAAGAERLPSKPDGPQPRSHHKKNRRLQVNGDGKTVVVFASVPTVTTEARTK----------LLNPKSSHSILSSPLRRGQGGGGHPQIASPVPPDPTRLPWPLGRRCW 4242
+V EW+A G L AP+LTYLT+F NP+CKR+MYR F TNCCE LRGLDLHAVSDEEVI+ FF A RY CS LA+PQPLFKGLTE +P Q+E TE+ L E D + + P +LAS+ RRV LL +FHARNSPVII QR+AR L + R+ ++ +R V L +IL++ GELYLVQEMMTP Q+R+L WFQRRI G FR K + C +TL RF+G + +FS FV LE AQ GGVVV+ D +GELAAAVA+A MV T GLSW EA+E+TATMVT V C+L+R FS+V+MPDWP+LE+D+ TDG+FV+RSA G LP + ++ GL T D +R R G++G+PR++EC +SRR V++ + S A R A ++QLW FR R+LARVL TLR+ GK PVP +LER L RCA+ATRIQAAWRGHVLRW L +TL SC+IV RAG+CIQRWWR TGL RL L RRLWALAS V PT+Y+ELDV+ TL+RGW+ ED VAF FQ G RVA S + PPS + G G +A RE P+W +V + P ++ QG +L Q+GAL+T V+AK+V+WP+A ATTD + + GD+ + + +G++ TSS+ TS S E E G P+ G V+LLELTFSS QEARARA+L+ LATEE GV+PNR AQLMTLGMLRRAAAGE G A P L PA+G+ +GD+VEVS+ RL EGR G+WFP +D++ G T YKVTL+ G+VE VP +RP D G E ALVEMSH+PSRW+ ARS+LTPADRLE+ELL RSL T T +V R LL+ +P + + +A +EL RFNGL GR L + P SPV R + P PRWAGS TM+ AR AGGLAA ALEKVA AAD A ATSTWVPGNRF+ LEKLV +AA E+Q+AA+E EL+ARR+ V RA+ E EP+PRDR+E+LKAAEVAIFRREADE +A L A+ NAAEA+E +RD K LT KA Q K+RE +V+ ER +L+KRN DV AKAR RR KQ L RAESN FTANASQLARHV K++ +S +A RRW KG + +E+ RRRML+RVQELQE K R E ++ RR LAAR RAR MDEAV+ HR+GQ G+ V + V+ VLRPS P G+ E+ D S G + G+GG R GS R R ++ I+++ A PSKP+ +P + +RRL+ N GKTVVV ASVPTVT EAR LL SSHS++S + G P S D T LPWPLGRRCW
Sbjct: 103 KVAEWRAVGGLGKAPKLTYLTLFFNPVCKRRMYRPFTTNCCESLRGLDLHAVSDEEVIEESEFFRAGRYSTCSSALALPQPLFKGLTETASAPTQQEEQSSRPYLPSPQPTTEV---LAEGDGHMPLRGAPNRDDSILASVMRRVQLLRRFHARNSPVIIGQRQARRFLGERFGVAAAVKIQARIRRWMVERRAVAALKNILRETGELYLVQEMMTPTQLRSLAWFQRRIAGHFRFKALVTCVRTLERFVGKVSTKFSTFVDSLEHAQVGGVVVSHDQSGELAAAVAKALMVTTPGLSWIEASERTATMVTTVSDCRLLRPFSFVEMPDWPVLEKDVDTDGLFVSRSAACSGTRA-KLPGVGPYMLEASNTPPRTQGLRETRPD-----SRVPTRLGVFGSPRIQECKVSRRNCAVRKFCQGSAAAKRRATMNARRDVNKQLWAFRPLAVRLLARVLRTLRNESMGKPPVPFILERQLLRCASATRIQAAWRGHVLRWTLSDTLASCVIVSRAGVCIQRWWRYQTGLALRLRLCRRLWALASAVSSPTLYVELDVFYTLIRGWKWDGDEDGVAFSFQSGNRVAVMSSFSDPPSGALGSKGANDLAGHEKRRGLVVSHSAARDTDRH--TRELPLWTLKSIVRQVLPSKIRQGAVLTQVGALITVDVKAKKVIWPLAPATTDTS-EPAEGGDVGDITTSSALGQSNGTRETSSESSSTAICLTSARSGEVGSQTHPTRAVPQREDSAEAGPPISLRTKKGDDVELLELTFSSIQEARARAVLLALATEEPGVVPNRAVAQLMTLGMLRRAAAGEQGQALPILKTPAQGFRRGDAVEVSLFRLSEGRGGAWFPAVVDRRNGYSTTYKVTLETGYVEHHVPEGSMRPRDCTGVEPALVEMSHIPSRWQWNARSLLTPADRLELELLRRSLPTTTMTTPSVGE-------RPLELLSANPRREADAC--VAAEELRRFNGLGGRGLVLGDPRPISPGSPVGRADPRAMGPSPPRWAGSQTMAAARTAGGLAARALEKVARAAVAADAAAATSTWVPGNRFRVGLEKLVQMAAHEAQDAAKEVELSARRDTVSRARQTERIEPSPRDRVEKLKAAEVAIFRREADEINRRAALERAIHDHELKVNAAEAREYMRDGKRLTAESVKADLENQKCIIKKRESDVEEERQRNLDKRNADVDSAKARVAQRRKDHAKQELRRAESNAFTANASQLARHVRKHAAVSYRAQNTRGMRRWAKGNKNDEEDGRRRMLRRVQELQEQK-RKEGTKLRRVLAARSRARVAMDEAVVRHRVGQTVSMGDGVLAETVMHVLRPSGGAQGPKGEQVDVAMHED----DESRLGSFGTGDGGKDPRRVGSLRERRPDNNVTISSSMATRGGPYPSKPETTRPPLREQTSRRLRANDTGKTVVVLASVPTVTREARASRPLQGTGGAALLGSTSSHSMISP----NRDVGAAPNATS----DQTALPWPLGRRCW 1564
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 1177.5 |
| Seed ortholog evalue | 0.0 |
| Seed eggNOG ortholog | 2880.D8LQ54 |
| Preferred name | cntrl |
| KEGG rclass | RC00056,RC00069,RC01161,RC01243 |
| KEGG ko | ko:K01251,ko:K16475,ko:K16770,ko:K19750,ko:K20237 |
| KEGG Reaction | R00192,R04936 |
| KEGG Pathway | ko00270,ko01100,ko04392,map00270,map01100,map04392 |
| KEGG Module | M00035 |
| EggNOG free text desc. | axoneme assembly |
| EggNOG OGs | COG4886@1,KOG0531@2759 |
| EC | 3.3.1.1 |
| COG Functional cat. | L |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko00001,ko00002,ko01000,ko01009,ko03036,ko04147,ko04812 |
| Hectar predicted targeting category | other localisation |
| Ec32 ortholog description | similar to leucine rich repeat containing 44 |
| Ec32 ortholog | Ec-26_006090.1 |
| Exons | 5 |
| Model size | 4245 |
| Cds size | 4239 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig1303.1833.1 >prot_S-dermatodea_contig1303.1833.1 ID=prot_S-dermatodea_contig1303.1833.1|Name=mRNA_S-dermatodea_contig1303.1833.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=1413bp
MEWQAAGSLSTAPRLTYLTMFSNPICKRKMYRTFVTNCCECLRGLDLHAV
SDEEVIDGLVFFEASRYRACSVGLAIPQPLFKGLTEATFSPIQEEITEIG
NTLKERDANAVVATRPRAFVLASISRRVGLLIKFHARNSPVIISQRRARI
LLRNKRCARAAVRIQACARKRILRQRVVDDLTSILKQNGELYLVQEMMTP
AQVRTLIWFQRRIVGRFRLKFVSNCAQTLNRFMGSMVQRFSAFVVCLERA
QAGGVVVASDAAGELAAAVARASMVATAGLSWEEAAEKTATMVTPVPGCK
LIRRFSYVDMPDWPILEEDITTDGVFVTRSAKGGGRVCTDLPQETSLSSD
EAMHGLVRTLSDHRGHRTRSCLRTGIYGNPRVRECLISRRGAFVQRIYRR
SPAMGRDALSTGALRSHEQLWVFRTENTRVLARVLCTLRHSPPGKRPVPC
LLERHLFRCAAATRIQAAWRGHVLRWNLLETLVSCLIVGRAGICIQRWWR
NMTGLRARLCLGRRLWALASTVFCPTMYMELDVYCTLVRGWRQPEGEDSV
AFVFQDGLRVASVNYPPSYPHENEVPYFGRGNLEGRPCGEPSAEGVAETP
GIREFPIWARHRVVPHISPLEVQGPILRQIGALLTEGVQAKRVVWPVAAA
TTDREIKSSVPGDLFEAIVGRTCNHLGTSSKFTSGGSSEENGSPVDFEGH
YGGVDLLELTFSSTQEARARALLVVLATEESGVLPNRPAAQLMTLGMLRR
AAAGEPGHASPTLSVPAKGYEKGDSVEVSVLRLIEGRCGSWFPGTIDQKI
GNGTAYKVTLDNGWVEPQVPHNCLRPYDRMGKEMALVEMSHLPSRWRREA
RSVLTPADRLEMELLYRSLTPTAEHGAVRSLLREDTHRHESLLTLSPCAD
VSSPEGIAVDELDRFNGLNGRVLLRPESPVLRMESPPVPRWAGSHTMSTA
RKAGGLAAEALEKVATVVAAADEAVATSTWVPGNRFKRNLEKLVHLAAFE
SQNAAEERELTARREAVVRAKSVEHAEPTPRDRLERLKAAEVAIFRREAD
ERRCKAVLNNALDRANRVANAAEAKECVRDTKELTDSCAKARRIKQIAES
KQREDEVKYERDMSLEKRNVDVQIAKARAFTRRVSREKQALCRAESNTFT
ANASQLARHVGKYSTISSKANAVGNKRRWVKGQQRHKEEMRRRMLKRVQE
LQEMKSRNERSRQRRTLAARGRARAIMDEAVLSHRLGQPNLSGNDVFTDE
VVQVLRPSSRPDGQLAPPGNREEGGAKDSSGFGPWRGEGGFRRGRQGSFR
FARNAHDTAIATAPAAGAERLPSKPDGPQPRSHHKKNRRLQVNGDGKTVV
VFASVPTVTTEARTKLLNPKSSHSILSSPLRRGQGGGGHPQIASPVPPDP
TRLPWPLGRRCW* back to topmRNA from alignment at S-dermatodea_contig1303:6602..12236+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_S-dermatodea_contig1303.1833.1 ID=mRNA_S-dermatodea_contig1303.1833.1|Name=mRNA_S-dermatodea_contig1303.1833.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=5635bp|location=Sequence derived from alignment at S-dermatodea_contig1303:6602..12236+ (Saccorhiza dermatodea SderLu1190fm monoicous)
CAGGTCATGGAATGGCAGGCCGCCGGAAGCCTCAGTACGGCACCTCGACT
GACTTACCTGACGATGTTCTCAAATCCCATCTGCAAGAGGAAGATGTATC
GGACGTTCGTGACGAACTGTTGTGAATGTCTCCGCGGGCTCGATCTCCAC
GCCGTTTCCGACGAGGAGGTCATCGATGGATTAGTTTTTTTCGAAGCTAG
CCGTTACAGAGCCTGCTCCGTTGGGCTTGCTATCCCGCAACCCCTCTTCA
AGGGGCTCACGGAGGCGACCTTCTCGCCGATTCAGGAAGAGATCACCGAG
ATTGGCAACACACTGAAGGAGAGAGACGCTAACGCTGTCGTTGCCACGCG
GCCAAGGGCTTTCGTCTTGGCAAGCATATCGCGTCGCGTTGGACTGCTGA
TCAAGTTTCACGCTCGGAATAGCCCGGTCATCATCAGTCAACGTCGGGCT
CGAATTTTGCTACGCAATAAGCGATGTGCGCGTGCCGCCGTGAGGATCCA
AGCCTGTGCACGCAAGCGAATCTTGAGACAGAGGGTGGTCGATGACCTGA
CAAGCATCTTGAAGCAGAATGGAGAGTTGTACCTTGTTCAGGTGCGAAAT
AATCATGTGAAGTAATCGTTTCTGTATACAAGTTGTACTTTCGGCATGTT
GTCGAACCGTACTTTAGTTGATTCACCGTTGCTTGGCAGGAGGTGGTCGA
GGGCTCTAAATATACGTGCATCGGGAAGTGACACGCTCGGGCCGGTATTG
GTAACATTTTTACAGTTTGGTCGTCTTCTTGCCGTTTTCTTCGACGTATT
TCATAAGTCTCTGTAGCCTTTAAACCTAGAGCCCTGCACATTTACCGGCT
AGGTAGTAAATGCTGCAATACAAGTCATCCCATGAGAACAAAATTCATGG
TGACGGCTGTTGCACACATCATTTGGGGAGTTTTGGAAAGCACGGTGGGT
AATTGCTTGACCTTTTAGCGGCAGGTCTTGTTCGGCGCAGCGCTGGTGTC
GGCAGATATGTATGTGTGTTGACGACGAGGTATGTTGGCGCTGGGATTGC
GCTTTCGTGCGCCACCGCGAATAACGACGCGCTCGCCTCTTTGACGAGCA
AATGATGACCCGTAGCGCTCCATCTGCTATTAATCGTGCAGGAAATGATG
ACGCCGGCGCAGGTTCGAACGCTAATTTGGTTCCAGCGACGTATCGTTGG
ACGCTTCCGCTTGAAGTTCGTTTCTAATTGCGCTCAAACGCTCAATCGCT
TCATGGGTTCAATGGTCCAACGATTTTCAGCCTTCGTCGTCTGCCTCGAA
CGTGCGCAAGCTGGCGGCGTCGTCGTCGCGTCTGATGCTGCCGGGGAGCT
TGCGGCCGCGGTTGCCAGGGCGTCAATGGTCGCGACGGCTGGATTGAGCT
GGGAGGAAGCGGCTGAGAAAACTGCGACGATGGTGACTCCCGTCCCAGGC
TGCAAACTCATTCGGCGCTTCTCGTACGTTGACATGCCGGACTGGCCAAT
CTTGGAGGAAGACATCACAACTGATGGTGTGTTTGTAACACGGTCTGCCA
AGGGTGGTGGGCGGGTTTGCACCGACTTGCCGCAAGAAACCTCTCTCTCT
TCGGATGAGGCAATGCATGGTCTCGTCCGAACTCTCAGCGATCATCGAGG
GCACCGGACGCGTTCGTGCTTGCGGACGGGAATATATGGGAATCCGCGGG
TACGAGAGTGTCTGATCTCTCGAAGGGGGGCTTTCGTCCAACGTATTTAC
CGAAGAAGTCCGGCAATGGGGCGAGATGCTCTATCGACCGGGGCCTTGCG
TTCACACGAGCAGCTTTGGGTGTTTCGAACGGAAAATACTCGCGTGCTTG
CTCGCGTTCTGTGCACGTTACGTCACTCGCCGCCGGGTAAGCGCCCCGTA
CCGTGTCTCTTAGAGCGCCATCTCTTTCGATGTGCTGCGGCTACTCGAAT
ACAGGCAGCGTGGCGTGGCCATGTTTTACGGTGGAACCTGTTGGAGACTC
TGGTCTCGTGTCTCATCGTGGGACGCGCGGGGATTTGTATACAGCGCTGG
TGGCGGAATATGACGGGTCTTCGCGCTCGGCTGTGTTTAGGAAGACGACT
GTGGGCCCTCGCGTCAACCGTATTTTGTCCAACCATGTATATGGAGCTGG
ATGTGTATTGCACCTTGGTGCGTGGATGGCGACAGCCTGAAGGCGAAGAT
AGTGTCGCGTTTGTGTTTCAAGATGGACTAAGGGTGGCAAGCGTCAACTA
TCCGCCATCTTATCCCCACGAGAATGAGGTACCTTATTTCGGCCGAGGAA
ACCTCGAAGGACGCCCTTGCGGCGAACCTTCTGCTGAAGGTGTCGCTGAA
ACTCCTGGTATCCGAGAATTCCCCATATGGGCGCGACATCGTGTTGTCCC
CCATATTTCGCCCCTCGAGGTCCAAGGGCCGATCTTGCGCCAGATAGGAG
CGCTACTCACTGAAGGAGTGCAAGCGAAGAGAGTGGTATGGCCCGTAGCG
GCCGCAACCACAGATCGAGAAATAAAAAGCAGTGTGCCTGGCGATTTGTT
CGAGGCTATCGTGGGCCGGACCTGCAACCATCTTGGCACCTCATCCAAAT
TCACGAGTGGTGGCTCCTCGGAGGAGAATGGATCCCCTGTCGATTTTGAA
GGCCATTACGGGGGGGTGGATTTGTTGGAGCTCACCTTTTCGAGCACCCA
AGAGGCCAGGGCACGAGCCTTACTGGTCGTTTTGGCTACCGAAGAAAGTG
GCGTACTGCCAAACCGACCCGCTGCGCAGCTTATGACGCTTGGGATGCTA
CGCAGGGCGGCTGCAGGGGAGCCAGGCCATGCGTCGCCAACTCTTTCAGT
CCCAGCAAAGGGGTATGAGAAAGGGGATTCGGTTGAGGTATCGGTGCTGA
GGCTGATCGAGGGCCGCTGTGGCAGCTGGTTCCCTGGAACAATAGACCAA
AAGATCGGCAACGGCACTGCCTACAAGGTACGAGATAATGGGCAGGCATC
ATTCGTTTGAACAATCAGCCCCAAAACCCTTCTTATTTCGTTGACCCCTG
AAGCATATCATGGCAGGTGTACACGCTACTTCTTGCGAGCGTCGAGTCTG
GTCACGGGAGGCGTGCCTTTTATCTGGGATTGTGCTGTACGAAGAAACGC
TTATCTATTGGTTACAGATATCACCAGGCCGCTTTCGCTGTCTTTCAAGA
TGGTCACCGTCTGTTTCCGACTGATCGATATTGTTTGAAATCAAGGTGAC
CTTGGACAACGGTTGGGTGGAACCTCAAGTTCCACATAACTGTCTTCGGC
CGTACGACCGCATGGGCAAGGAGATGGCTCTCGTGGAAATGAGCCACCTG
CCATCTCGCTGGCGGCGAGAAGCACGATCTGTCCTCACACCCGCCGACAG
GCTGGAAATGGAGCTCTTATACAGGTCGCTCACGCCAACTGCGGAACACG
GGGCAGTGCGCTCGCTCTTACGGGAGGATACGCACCGACACGAAAGCCTT
CTGACACTCTCACCTTGTGCTGATGTATCAAGCCCGGAAGGTATCGCGGT
CGATGAGCTGGATCGCTTCAACGGACTCAACGGCCGCGTGCTCTTGCGAC
CGGAGAGCCCTGTCTTGCGAATGGAGAGCCCTCCGGTCCCGCGTTGGGCC
GGGTCTCATACAATGTCCACGGCGAGGAAAGCGGGAGGACTGGCGGCTGA
AGCCTTAGAAAAAGTGGCGACAGTGGTCGCGGCAGCGGATGAAGCGGTAG
CAACCAGTACCTGGGTGCCGGGAAATCGTTTCAAACGAAACCTTGAAAAG
CTTGTGCACCTTGCCGCGTTCGAGAGCCAAAACGCCGCAGAGGAGAGGGA
ACTAACCGCGAGACGGGAAGCGGTGGTACGAGCGAAAAGTGTGGAACACG
CCGAGCCTACGCCACGCGACCGCTTAGAGCGTCTAAAGGCCGCGGAAGTC
GCCATTTTTCGACGGGAGGCTGACGAGCGAAGATGCAAGGCGGTATTGAA
TAACGCTTTGGACAGAGCCAATCGGGTGGCCAACGCTGCCGAAGCGAAGG
AGTGCGTGCGAGACACAAAGGAACTTACCGACTCGTGTGCGAAAGCTCGA
CGGATAAAGCAAATTGCCGAAAGCAAACAGCGGGAGGACGAGGTGAAATA
TGAACGCGACATGAGCTTAGAAAAGCGAAATGTAGACGTGCAGATCGCTA
AGGCGCGAGCGTTTACGAGGAGAGTCAGTCGCGAAAAGCAAGCCTTGTGT
CGCGCCGAAAGCAACACTTTCACGGCGAATGCGTCCCAGCTAGCAAGGCA
CGTCGGAAAGTATTCGACGATATCGAGCAAGGCTAATGCCGTAGGGAACA
AGCGGCGATGGGTCAAGGGCCAGCAGAGGCATAAGGAGGAGATGAGGCGG
CGAATGTTGAAGCGGGTTCAAGAGCTACAAGAGATGAAGAGGTGATTTAC
AGTTCCCCCACTATAACCACGTTCGGAGGTTGTTCGGCTTGGGGTGGGGA
TATACTTCTATTAGCGACCTCGAAGTTTTTCACACCAGATTTGTTTTGGC
AATGTGGATGCACCTCTGTTCATCTCGAAGCGTACATCATGTAAGTTGTT
GACAAATTTTGGGCTGGGTCCGACACCCACCAAGTACGCGTGGCCCAGTC
CGAGAAACCAGCGAGCCGCGAGAGTTACAGACGCAAAGCGCGAGAAAAGT
CTAAGGCAAGAACCAGAGAGGTACGGAATACTACTATTCCTCGTGACCAC
GGACGGTATTCGGATAATTCCAGTCAGTTGTACGTGAGCCACACACACAC
ACGGAAAAAATAGTCGAAATGTCGCACATTCCTCACGTCGGGTTGAGTTA
CGCTCGCGCTTCTCTCATGAGTGAGTAATTGATCATGTCCTGAGATTCAA
CACACTTACACTTGTTTTCCACCGAGCAGGAACGAACGGAGTCGACAGCG
GAGGACCCTCGCCGCTCGCGGAAGGGCAAGGGCTATCATGGATGAAGCTG
TCCTTAGTCACCGCCTCGGTCAGCCAAACCTCTCAGGAAACGATGTCTTT
ACGGACGAGGTAGTGCAAGTTTTGAGGCCCAGCAGCAGGCCGGATGGTCA
ACTTGCCCCCCCTGGTAACAGAGAAGAGGGTGGTGCGAAGGACTCCAGCG
GTTTTGGACCCTGGAGAGGGGAAGGTGGTTTCAGGGTCGGCGATAAGTAT
GGTCAAAATACGGGAGAATCGAATTTCTGCTCGGCACAGCAGAGGCCTTC
AACCAGTGGAAGTGTGGTCGAGCGGGGAAGGCAGGGCAGCTTCAGGTTCG
CCCGCAACGCCCATGATACTGCAATTGCTACCGCCCCCGCGGCTGGGGCA
GAAAGGCTCCCATCGAAACCTGATGGCCCCCAACCGCGTTCCCACCACAA
AAAAAATCGCCGTTTGCAAGTCAACGGCGATGGGAAGACCGTCGTGGTGT
TTGCATCCGTCCCTACCGTGACAACGGAAGCCAGAACGAAGCTGCTCAAC
CCTAAGAGCAGTCACTCTATACTGTCTTCGCCGCTGCGGCGAGGCCAAGG
CGGTGGTGGACACCCGCAAATAGCGTCTCCCGTGCCCCCTGATCCGACAC
GTTTACCCTGGCCATTGGGACGCCGATGCTGGTAA back to topCoding sequence (CDS) from alignment at S-dermatodea_contig1303:6602..12236+ >mRNA_S-dermatodea_contig1303.1833.1 ID=mRNA_S-dermatodea_contig1303.1833.1|Name=mRNA_S-dermatodea_contig1303.1833.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=8478bp|location=Sequence derived from alignment at S-dermatodea_contig1303:6602..12236+ (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGGAATGGCAGGCCGCCGGAAGCCTCAGTACGGCACCTCGACTGACTTA
CCTGACGATGTTCTCAAATCCCATCTGCAAGAGGAAGATGTATCGGACGT
TCGTGACGAACTGTTGTGAATGTCTCCGCGGGCTCGATCTCCACGCCGTT
TCCGACGAGGAGGTCATCGATGGATTAGTTTTTTTCGAAGCTAGCCGTTA
CAGAGCCTGCTCCGTTGGGCTTGCTATCCCGCAACCCCTCTTCAAGGGGC
TCACGGAGGCGACCTTCTCGCCGATTCAGGAAGAGATCACCGAGATTGGC
AACACACTGAAGGAGAGAGACGCTAACGCTGTCGTTGCCACGCGGCCAAG
GGCTTTCGTCTTGGCAAGCATATCGCGTCGCGTTGGACTGCTGATCAAGT
TTCACGCTCGGAATAGCCCGGTCATCATCAGTCAACGTCGGGCTCGAATT
TTGCTACGCAATAAGCGATGTGCGCGTGCCGCCGTGAGGATCCAAGCCTG
TGCACGCAAGCGAATCTTGAGACAGAGGGTGGTCGATGACCTGACAAGCA
TCTTGAAGCAGAATGGAGAGTTGTACCTTGTTCAGATGGAATGGCAGGCC
GCCGGAAGCCTCAGTACGGCACCTCGACTGACTTACCTGACGATGTTCTC
AAATCCCATCTGCAAGAGGAAGATGTATCGGACGTTCGTGACGAACTGTT
GTGAATGTCTCCGCGGGCTCGATCTCCACGCCGTTTCCGACGAGGAGGTC
ATCGATGGATTAGTTTTTTTCGAAGCTAGCCGTTACAGAGCCTGCTCCGT
TGGGCTTGCTATCCCGCAACCCCTCTTCAAGGGGCTCACGGAGGCGACCT
TCTCGCCGATTCAGGAAGAGATCACCGAGATTGGCAACACACTGAAGGAG
AGAGACGCTAACGCTGTCGTTGCCACGCGGCCAAGGGCTTTCGTCTTGGC
AAGCATATCGCGTCGCGTTGGACTGCTGATCAAGTTTCACGCTCGGAATA
GCCCGGTCATCATCAGTCAACGTCGGGCTCGAATTTTGCTACGCAATAAG
CGATGTGCGCGTGCCGCCGTGAGGATCCAAGCCTGTGCACGCAAGCGAAT
CTTGAGACAGAGGGTGGTCGATGACCTGACAAGCATCTTGAAGCAGAATG
GAGAGTTGTACCTTGTTCAGGAAATGATGACGCCGGCGCAGGTTCGAACG
CTAATTTGGTTCCAGCGACGTATCGTTGGACGCTTCCGCTTGAAGTTCGT
TTCTAATTGCGCTCAAACGCTCAATCGCTTCATGGGTTCAATGGTCCAAC
GATTTTCAGCCTTCGTCGTCTGCCTCGAACGTGCGCAAGCTGGCGGCGTC
GTCGTCGCGTCTGATGCTGCCGGGGAGCTTGCGGCCGCGGTTGCCAGGGC
GTCAATGGTCGCGACGGCTGGATTGAGCTGGGAGGAAGCGGCTGAGAAAA
CTGCGACGATGGTGACTCCCGTCCCAGGCTGCAAACTCATTCGGCGCTTC
TCGTACGTTGACATGCCGGACTGGCCAATCTTGGAGGAAGACATCACAAC
TGATGGTGTGTTTGTAACACGGTCTGCCAAGGGTGGTGGGCGGGTTTGCA
CCGACTTGCCGCAAGAAACCTCTCTCTCTTCGGATGAGGCAATGCATGGT
CTCGTCCGAACTCTCAGCGATCATCGAGGGCACCGGACGCGTTCGTGCTT
GCGGACGGGAATATATGGGAATCCGCGGGTACGAGAGTGTCTGATCTCTC
GAAGGGGGGCTTTCGTCCAACGTATTTACCGAAGAAGTCCGGCAATGGGG
CGAGATGCTCTATCGACCGGGGCCTTGCGTTCACACGAGCAGCTTTGGGT
GTTTCGAACGGAAAATACTCGCGTGCTTGCTCGCGTTCTGTGCACGTTAC
GTCACTCGCCGCCGGGTAAGCGCCCCGTACCGTGTCTCTTAGAGCGCCAT
CTCTTTCGATGTGCTGCGGCTACTCGAATACAGGCAGCGTGGCGTGGCCA
TGTTTTACGGTGGAACCTGTTGGAGACTCTGGTCTCGTGTCTCATCGTGG
GACGCGCGGGGATTTGTATACAGCGCTGGTGGCGGAATATGACGGGTCTT
CGCGCTCGGCTGTGTTTAGGAAGACGACTGTGGGCCCTCGCGTCAACCGT
ATTTTGTCCAACCATGTATATGGAGCTGGATGTGTATTGCACCTTGGTGC
GTGGATGGCGACAGCCTGAAGGCGAAGATAGTGTCGCGTTTGTGTTTCAA
GATGGACTAAGGGTGGCAAGCGTCAACTATCCGCCATCTTATCCCCACGA
GAATGAGGTACCTTATTTCGGCCGAGGAAACCTCGAAGGACGCCCTTGCG
GCGAACCTTCTGCTGAAGGTGTCGCTGAAACTCCTGGTATCCGAGAATTC
CCCATATGGGCGCGACATCGTGTTGTCCCCCATATTTCGCCCCTCGAGGT
CCAAGGGCCGATCTTGCGCCAGATAGGAGCGCTACTCACTGAAGGAGTGC
AAGCGAAGAGAGTGGTATGGCCCGTAGCGGCCGCAACCACAGATCGAGAA
ATAAAAAGCAGTGTGCCTGGCGATTTGTTCGAGGCTATCGTGGGCCGGAC
CTGCAACCATCTTGGCACCTCATCCAAATTCACGAGTGGTGGCTCCTCGG
AGGAGAATGGATCCCCTGTCGATTTTGAAGGCCATTACGGGGGGGTGGAT
TTGTTGGAGCTCACCTTTTCGAGCACCCAAGAGGCCAGGGCACGAGCCTT
ACTGGTCGTTTTGGCTACCGAAGAAAGTGGCGTACTGCCAAACCGACCCG
CTGCGCAGCTTATGACGCTTGGGATGCTACGCAGGGCGGCTGCAGGGGAG
CCAGGCCATGCGTCGCCAACTCTTTCAGTCCCAGCAAAGGGGTATGAGAA
AGGGGATTCGGTTGAGGTATCGGTGCTGAGGCTGATCGAGGGCCGCTGTG
GCAGCTGGTTCCCTGGAACAATAGACCAAAAGATCGGCAACGGCACTGCC
TACAAGGAAATGATGACGCCGGCGCAGGTTCGAACGCTAATTTGGTTCCA
GCGACGTATCGTTGGACGCTTCCGCTTGAAGTTCGTTTCTAATTGCGCTC
AAACGCTCAATCGCTTCATGGGTTCAATGGTCCAACGATTTTCAGCCTTC
GTCGTCTGCCTCGAACGTGCGCAAGCTGGCGGCGTCGTCGTCGCGTCTGA
TGCTGCCGGGGAGCTTGCGGCCGCGGTTGCCAGGGCGTCAATGGTCGCGA
CGGCTGGATTGAGCTGGGAGGAAGCGGCTGAGAAAACTGCGACGATGGTG
ACTCCCGTCCCAGGCTGCAAACTCATTCGGCGCTTCTCGTACGTTGACAT
GCCGGACTGGCCAATCTTGGAGGAAGACATCACAACTGATGGTGTGTTTG
TAACACGGTCTGCCAAGGGTGGTGGGCGGGTTTGCACCGACTTGCCGCAA
GAAACCTCTCTCTCTTCGGATGAGGCAATGCATGGTCTCGTCCGAACTCT
CAGCGATCATCGAGGGCACCGGACGCGTTCGTGCTTGCGGACGGGAATAT
ATGGGAATCCGCGGGTACGAGAGTGTCTGATCTCTCGAAGGGGGGCTTTC
GTCCAACGTATTTACCGAAGAAGTCCGGCAATGGGGCGAGATGCTCTATC
GACCGGGGCCTTGCGTTCACACGAGCAGCTTTGGGTGTTTCGAACGGAAA
ATACTCGCGTGCTTGCTCGCGTTCTGTGCACGTTACGTCACTCGCCGCCG
GGTAAGCGCCCCGTACCGTGTCTCTTAGAGCGCCATCTCTTTCGATGTGC
TGCGGCTACTCGAATACAGGCAGCGTGGCGTGGCCATGTTTTACGGTGGA
ACCTGTTGGAGACTCTGGTCTCGTGTCTCATCGTGGGACGCGCGGGGATT
TGTATACAGCGCTGGTGGCGGAATATGACGGGTCTTCGCGCTCGGCTGTG
TTTAGGAAGACGACTGTGGGCCCTCGCGTCAACCGTATTTTGTCCAACCA
TGTATATGGAGCTGGATGTGTATTGCACCTTGGTGCGTGGATGGCGACAG
CCTGAAGGCGAAGATAGTGTCGCGTTTGTGTTTCAAGATGGACTAAGGGT
GGCAAGCGTCAACTATCCGCCATCTTATCCCCACGAGAATGAGGTACCTT
ATTTCGGCCGAGGAAACCTCGAAGGACGCCCTTGCGGCGAACCTTCTGCT
GAAGGTGTCGCTGAAACTCCTGGTATCCGAGAATTCCCCATATGGGCGCG
ACATCGTGTTGTCCCCCATATTTCGCCCCTCGAGGTCCAAGGGCCGATCT
TGCGCCAGATAGGAGCGCTACTCACTGAAGGAGTGCAAGCGAAGAGAGTG
GTATGGCCCGTAGCGGCCGCAACCACAGATCGAGAAATAAAAAGCAGTGT
GCCTGGCGATTTGTTCGAGGCTATCGTGGGCCGGACCTGCAACCATCTTG
GCACCTCATCCAAATTCACGAGTGGTGGCTCCTCGGAGGAGAATGGATCC
CCTGTCGATTTTGAAGGCCATTACGGGGGGGTGGATTTGTTGGAGCTCAC
CTTTTCGAGCACCCAAGAGGCCAGGGCACGAGCCTTACTGGTCGTTTTGG
CTACCGAAGAAAGTGGCGTACTGCCAAACCGACCCGCTGCGCAGCTTATG
ACGCTTGGGATGCTACGCAGGGCGGCTGCAGGGGAGCCAGGCCATGCGTC
GCCAACTCTTTCAGTCCCAGCAAAGGGGTATGAGAAAGGGGATTCGGTTG
AGGTATCGGTGCTGAGGCTGATCGAGGGCCGCTGTGGCAGCTGGTTCCCT
GGAACAATAGACCAAAAGATCGGCAACGGCACTGCCTACAAGGTGACCTT
GGACAACGGTTGGGTGGAACCTCAAGTTCCACATAACTGTCTTCGGCCGT
ACGACCGCATGGGCAAGGAGATGGCTCTCGTGGAAATGAGCCACCTGCCA
TCTCGCTGGCGGCGAGAAGCACGATCTGTCCTCACACCCGCCGACAGGCT
GGAAATGGAGCTCTTATACAGGTCGCTCACGCCAACTGCGGAACACGGGG
CAGTGCGCTCGCTCTTACGGGAGGATACGCACCGACACGAAAGCCTTCTG
ACACTCTCACCTTGTGCTGATGTATCAAGCCCGGAAGGTATCGCGGTCGA
TGAGCTGGATCGCTTCAACGGACTCAACGGCCGCGTGCTCTTGCGACCGG
AGAGCCCTGTCTTGCGAATGGAGAGCCCTCCGGTCCCGCGTTGGGCCGGG
TCTCATACAATGTCCACGGCGAGGAAAGCGGGAGGACTGGCGGCTGAAGC
CTTAGAAAAAGTGGCGACAGTGGTCGCGGCAGCGGATGAAGCGGTAGCAA
CCAGTACCTGGGTGCCGGGAAATCGTTTCAAACGAAACCTTGAAAAGCTT
GTGCACCTTGCCGCGTTCGAGAGCCAAAACGCCGCAGAGGAGAGGGAACT
AACCGCGAGACGGGAAGCGGTGGTACGAGCGAAAAGTGTGGAACACGCCG
AGCCTACGCCACGCGACCGCTTAGAGCGTCTAAAGGCCGCGGAAGTCGCC
ATTTTTCGACGGGAGGCTGACGAGCGAAGATGCAAGGCGGTATTGAATAA
CGCTTTGGACAGAGCCAATCGGGTGGCCAACGCTGCCGAAGCGAAGGAGT
GCGTGCGAGACACAAAGGAACTTACCGACTCGTGTGCGAAAGCTCGACGG
ATAAAGCAAATTGCCGAAAGCAAACAGCGGGAGGACGAGGTGAAATATGA
ACGCGACATGAGCTTAGAAAAGCGAAATGTAGACGTGCAGATCGCTAAGG
CGCGAGCGTTTACGAGGAGAGTCAGTCGCGAAAAGCAAGCCTTGTGTCGC
GCCGAAAGCAACACTTTCACGGCGAATGCGTCCCAGCTAGCAAGGCACGT
CGGAAAGTATTCGACGATATCGAGCAAGGCTAATGCCGTAGGGAACAAGC
GGCGATGGGTCAAGGGCCAGCAGAGGCATAAGGAGGAGATGAGGCGGCGA
ATGTTGAAGCGGGTTCAAGAGCTACAAGAGATGAAGAGGTGACCTTGGAC
AACGGTTGGGTGGAACCTCAAGTTCCACATAACTGTCTTCGGCCGTACGA
CCGCATGGGCAAGGAGATGGCTCTCGTGGAAATGAGCCACCTGCCATCTC
GCTGGCGGCGAGAAGCACGATCTGTCCTCACACCCGCCGACAGGCTGGAA
ATGGAGCTCTTATACAGGTCGCTCACGCCAACTGCGGAACACGGGGCAGT
GCGCTCGCTCTTACGGGAGGATACGCACCGACACGAAAGCCTTCTGACAC
TCTCACCTTGTGCTGATGTATCAAGCCCGGAAGGTATCGCGGTCGATGAG
CTGGATCGCTTCAACGGACTCAACGGCCGCGTGCTCTTGCGACCGGAGAG
CCCTGTCTTGCGAATGGAGAGCCCTCCGGTCCCGCGTTGGGCCGGGTCTC
ATACAATGTCCACGGCGAGGAAAGCGGGAGGACTGGCGGCTGAAGCCTTA
GAAAAAGTGGCGACAGTGGTCGCGGCAGCGGATGAAGCGGTAGCAACCAG
TACCTGGGTGCCGGGAAATCGTTTCAAACGAAACCTTGAAAAGCTTGTGC
ACCTTGCCGCGTTCGAGAGCCAAAACGCCGCAGAGGAGAGGGAACTAACC
GCGAGACGGGAAGCGGTGGTACGAGCGAAAAGTGTGGAACACGCCGAGCC
TACGCCACGCGACCGCTTAGAGCGTCTAAAGGCCGCGGAAGTCGCCATTT
TTCGACGGGAGGCTGACGAGCGAAGATGCAAGGCGGTATTGAATAACGCT
TTGGACAGAGCCAATCGGGTGGCCAACGCTGCCGAAGCGAAGGAGTGCGT
GCGAGACACAAAGGAACTTACCGACTCGTGTGCGAAAGCTCGACGGATAA
AGCAAATTGCCGAAAGCAAACAGCGGGAGGACGAGGTGAAATATGAACGC
GACATGAGCTTAGAAAAGCGAAATGTAGACGTGCAGATCGCTAAGGCGCG
AGCGTTTACGAGGAGAGTCAGTCGCGAAAAGCAAGCCTTGTGTCGCGCCG
AAAGCAACACTTTCACGGCGAATGCGTCCCAGCTAGCAAGGCACGTCGGA
AAGTATTCGACGATATCGAGCAAGGCTAATGCCGTAGGGAACAAGCGGCG
ATGGGTCAAGGGCCAGCAGAGGCATAAGGAGGAGATGAGGCGGCGAATGT
TGAAGCGGGTTCAAGAGCTACAAGAGATGAAGAGCAGGAACGAACGGAGT
CGACAGCGGAGGACCCTCGCCGCTCGCGGAAGGGCAAGGGCTATCATGGA
TGAAGCTGTCCTTAGTCACCGCCTCGGTCAGCCAAACCTCTCAGGAAACG
ATGTCTTTACGGACGAGGTAGTGCAAGTTTTGAGGCCCAGCAGCAGGCCG
GATGGTCAACTTGCCCCCCCTGGTAACAGAGAAGAGGGTGGTGCGAAGGA
CTCCAGCGGTTTTGGACCCTGGAGAGGGGAAGGTGGTTTCAGGCAGGAAC
GAACGGAGTCGACAGCGGAGGACCCTCGCCGCTCGCGGAAGGGCAAGGGC
TATCATGGATGAAGCTGTCCTTAGTCACCGCCTCGGTCAGCCAAACCTCT
CAGGAAACGATGTCTTTACGGACGAGGTAGTGCAAGTTTTGAGGCCCAGC
AGCAGGCCGGATGGTCAACTTGCCCCCCCTGGTAACAGAGAAGAGGGTGG
TGCGAAGGACTCCAGCGGTTTTGGACCCTGGAGAGGGGAAGGTGGTTTCA
GGCGGGGAAGGCAGGGCAGCTTCAGGTTCGCCCGCAACGCCCATGATACT
GCAATTGCTACCGCCCCCGCGGCTGGGGCAGAAAGGCTCCCATCGAAACC
TGATGGCCCCCAACCGCGTTCCCACCACAAAAAAAATCGCCGTTTGCAAG
TCAACGGCGATGGGAAGACCGTCGTGGTGTTTGCATCCGTCCCTACCGTG
ACAACGGAAGCCAGAACGAAGCTGCTCAACCCTAAGAGCAGTCACTCTAT
ACTGTCTTCGCCGCTGCGGCGAGGCCAAGGCGGTGGTGGACACCCGCAAA
TAGCGTCTCCCGTGCCCCCTGATCCGACACGTTTACCCTGGCCATTGGGA
CGCCGATGCTGGTAACGGGGAAGGCAGGGCAGCTTCAGGTTCGCCCGCAA
CGCCCATGATACTGCAATTGCTACCGCCCCCGCGGCTGGGGCAGAAAGGC
TCCCATCGAAACCTGATGGCCCCCAACCGCGTTCCCACCACAAAAAAAAT
CGCCGTTTGCAAGTCAACGGCGATGGGAAGACCGTCGTGGTGTTTGCATC
CGTCCCTACCGTGACAACGGAAGCCAGAACGAAGCTGCTCAACCCTAAGA
GCAGTCACTCTATACTGTCTTCGCCGCTGCGGCGAGGCCAAGGCGGTGGT
GGACACCCGCAAATAGCGTCTCCCGTGCCCCCTGATCCGACACGTTTACC
CTGGCCATTGGGACGCCGATGCTGGTAA back to top
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