mRNA_S-dermatodea_contig13003.1823.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig13003.1823.1 vs. uniprot
Match: A0A6H5JSC8_9PHAE (Alpha,alpha-trehalase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSC8_9PHAE) HSP 1 Score: 157 bits (397), Expect = 7.530e-43 Identity = 69/84 (82.14%), Postives = 76/84 (90.48%), Query Frame = 1
Query: 1 RAWALSIHGLWPLLVRKVVDDVAVHPSRYSLLPRRHPVVIPGGRFRESYYWDTFWTVRGLLVSGMVDTARGVVLNLLDDVDRFG 252
R WA +IHGLWPLLVR DVAV+P R+SLLPR+HPVV+PGGRFRESYYWDTFWT+RGL+VSGMVDTARG VLNLLDDVDRFG
Sbjct: 168 REWARAIHGLWPLLVRANAADVAVNPQRHSLLPRQHPVVVPGGRFRESYYWDTFWTIRGLVVSGMVDTARGAVLNLLDDVDRFG 251
BLAST of mRNA_S-dermatodea_contig13003.1823.1 vs. uniprot
Match: A0A7S1CDW3_9STRA (Alpha,alpha-trehalase (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CDW3_9STRA) HSP 1 Score: 127 bits (318), Expect = 1.240e-34 Identity = 53/84 (63.10%), Postives = 66/84 (78.57%), Query Frame = 1
Query: 1 RAWALSIHGLWPLLVRKVVDDVAVHPSRYSLLPRRHPVVIPGGRFRESYYWDTFWTVRGLLVSGMVDTARGVVLNLLDDVDRFG 252
R WA +++ LW L R+V +V HP R++L+ RHPVV+PGGRFRE+YYWDT+W VRGLL GMVDTARG+V NLLD+VD FG
Sbjct: 144 REWASAVNALWKELGRQVAPEVVAHPQRHTLIALRHPVVVPGGRFRETYYWDTYWIVRGLLTCGMVDTARGLVQNLLDEVDAFG 227
BLAST of mRNA_S-dermatodea_contig13003.1823.1 vs. uniprot
Match: A0A7S2WW33_9STRA (Trehalase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WW33_9STRA) HSP 1 Score: 129 bits (323), Expect = 5.380e-33 Identity = 57/84 (67.86%), Postives = 68/84 (80.95%), Query Frame = 1
Query: 1 RAWALSIHGLWPLLVRKVVDDVAVHPSRYSLLPRRHPVVIPGGRFRESYYWDTFWTVRGLLVSGMVDTARGVVLNLLDDVDRFG 252
R++ S+HG+WP LVR+ D V HP R+SLL R H VV+PGGRFRESYYWD++W VRGLL+SGM TA+GVVLNLLDDV RFG
Sbjct: 138 RSFFRSLHGIWPSLVRRTSDAVHQHPQRHSLLWREHSVVVPGGRFRESYYWDSYWIVRGLLLSGMHSTAQGVVLNLLDDVKRFG 221
BLAST of mRNA_S-dermatodea_contig13003.1823.1 vs. uniprot
Match: A0A7R8WRI6_9CRUS (Trehalase n=1 Tax=Cyprideis torosa TaxID=163714 RepID=A0A7R8WRI6_9CRUS) HSP 1 Score: 121 bits (303), Expect = 1.220e-32 Identity = 51/84 (60.71%), Postives = 65/84 (77.38%), Query Frame = 1
Query: 1 RAWALSIHGLWPLLVRKVVDDVAVHPSRYSLLPRRHPVVIPGGRFRESYYWDTFWTVRGLLVSGMVDTARGVVLNLLDDVDRFG 252
R WA +H LW L +KVVDDV +PS+YS+L HP ++PGGRFRE YYWD++WT+RGLLVSGM DT +G++LN L V+RFG
Sbjct: 95 REWASELHQLWKKLGKKVVDDVRDNPSQYSILYVPHPTIVPGGRFREFYYWDSYWTIRGLLVSGMTDTVKGMLLNFLALVERFG 178
BLAST of mRNA_S-dermatodea_contig13003.1823.1 vs. uniprot
Match: A0A835ZF27_9STRA (Trehalase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZF27_9STRA) HSP 1 Score: 120 bits (301), Expect = 5.320e-30 Identity = 52/82 (63.41%), Postives = 63/82 (76.83%), Query Frame = 1
Query: 7 WALSIHGLWPLLVRKVVDDVAVHPSRYSLLPRRHPVVIPGGRFRESYYWDTFWTVRGLLVSGMVDTARGVVLNLLDDVDRFG 252
WA ++H LWP L R+V DV +P R+SLL R + VV+PGGRFRESYYWD++W +GLLVSGM TA+GVV NLLDDV FG
Sbjct: 104 WAAALHALWPGLTRQVSPDVKANPQRHSLLHRANAVVVPGGRFRESYYWDSYWICKGLLVSGMAQTAQGVVQNLLDDVKTFG 185
BLAST of mRNA_S-dermatodea_contig13003.1823.1 vs. uniprot
Match: W7TGI9_9STRA (Trehalase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TGI9_9STRA) HSP 1 Score: 120 bits (300), Expect = 7.530e-30 Identity = 53/82 (64.63%), Postives = 61/82 (74.39%), Query Frame = 1
Query: 7 WALSIHGLWPLLVRKVVDDVAVHPSRYSLLPRRHPVVIPGGRFRESYYWDTFWTVRGLLVSGMVDTARGVVLNLLDDVDRFG 252
WA ++ W L RKV DDV ++P RYS+L R HPVVIPGGRFRESYYWD++W V GLL M DTARG+V NLLDDV FG
Sbjct: 70 WAAELNHFWKQLCRKVSDDVFLNPQRYSILRRTHPVVIPGGRFRESYYWDSYWIVLGLLACDMKDTARGLVQNLLDDVANFG 151
BLAST of mRNA_S-dermatodea_contig13003.1823.1 vs. uniprot
Match: A0A4D9CWV3_9STRA (Trehalase n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CWV3_9STRA) HSP 1 Score: 120 bits (300), Expect = 1.010e-29 Identity = 53/82 (64.63%), Postives = 61/82 (74.39%), Query Frame = 1
Query: 7 WALSIHGLWPLLVRKVVDDVAVHPSRYSLLPRRHPVVIPGGRFRESYYWDTFWTVRGLLVSGMVDTARGVVLNLLDDVDRFG 252
WA ++ W L RKV DDV ++P RYS+L R HPVVIPGGRFRESYYWD++W V GLL M DTARG+V NLLDDV FG
Sbjct: 262 WAAELNHFWKQLCRKVSDDVFLNPQRYSILRRTHPVVIPGGRFRESYYWDSYWIVLGLLACDMKDTARGLVQNLLDDVANFG 343
BLAST of mRNA_S-dermatodea_contig13003.1823.1 vs. uniprot
Match: A0A5J9V8N4_9POAL (Trehalase n=1 Tax=Eragrostis curvula TaxID=38414 RepID=A0A5J9V8N4_9POAL) HSP 1 Score: 119 bits (299), Expect = 1.140e-29 Identity = 52/84 (61.90%), Postives = 63/84 (75.00%), Query Frame = 1
Query: 1 RAWALSIHGLWPLLVRKVVDDVAVHPSRYSLLPRRHPVVIPGGRFRESYYWDTFWTVRGLLVSGMVDTARGVVLNLLDDVDRFG 252
RAWAL +H LW LL R+V DVA HP R++LLP VVIPG RFRE YYWDT+W +RGLLVS M DTA+ V LNL+ V+++G
Sbjct: 171 RAWALEVHALWKLLARRVAPDVAAHPERHTLLPLPGAVVIPGARFREVYYWDTYWVIRGLLVSKMYDTAKEVTLNLVYLVEKYG 254
BLAST of mRNA_S-dermatodea_contig13003.1823.1 vs. uniprot
Match: A0A103XR14_CYNCS (Trehalase n=3 Tax=Cynara cardunculus var. scolymus TaxID=59895 RepID=A0A103XR14_CYNCS) HSP 1 Score: 117 bits (293), Expect = 5.730e-29 Identity = 47/84 (55.95%), Postives = 62/84 (73.81%), Query Frame = 1
Query: 1 RAWALSIHGLWPLLVRKVVDDVAVHPSRYSLLPRRHPVVIPGGRFRESYYWDTFWTVRGLLVSGMVDTARGVVLNLLDDVDRFG 252
R WAL +H LW L RKV + V HP ++LLP +HPV+IPG RF E YYWD++W +RGLL S M +TA+G+V+NL+D VD +G
Sbjct: 153 RDWALEVHSLWKTLSRKVSNQVLEHPELHTLLPLKHPVIIPGSRFEEVYYWDSYWVIRGLLASKMYETAKGIVINLIDLVDTYG 236
BLAST of mRNA_S-dermatodea_contig13003.1823.1 vs. uniprot
Match: W7TPJ2_9STRA (Trehalase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TPJ2_9STRA) HSP 1 Score: 117 bits (294), Expect = 6.460e-29 Identity = 53/83 (63.86%), Postives = 63/83 (75.90%), Query Frame = 1
Query: 4 AWALSIHGLWPLLVRKVVDDVAVHPSRYSLLPRRHPVVIPGGRFRESYYWDTFWTVRGLLVSGMVDTARGVVLNLLDDVDRFG 252
AWA +++ + L RKV DDV ++P RYS+L R HPVVIPGGRFRESYYWD++W V GLL M DTARG+V NLLDDV FG
Sbjct: 214 AWAQTLNQAFASLTRKVSDDVFLNPQRYSILRRTHPVVIPGGRFRESYYWDSYWIVLGLLACDMKDTARGLVQNLLDDVANFG 296 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig13003.1823.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig13003.1823.1 >prot_S-dermatodea_contig13003.1823.1 ID=prot_S-dermatodea_contig13003.1823.1|Name=mRNA_S-dermatodea_contig13003.1823.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=85bp RAWALSIHGLWPLLVRKVVDDVAVHPSRYSLLPRRHPVVIPGGRFRESYYback to top mRNA from alignment at S-dermatodea_contig13003:1665..2253- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig13003.1823.1 ID=mRNA_S-dermatodea_contig13003.1823.1|Name=mRNA_S-dermatodea_contig13003.1823.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=589bp|location=Sequence derived from alignment at S-dermatodea_contig13003:1665..2253- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig13003:1665..2253- >mRNA_S-dermatodea_contig13003.1823.1 ID=mRNA_S-dermatodea_contig13003.1823.1|Name=mRNA_S-dermatodea_contig13003.1823.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=510bp|location=Sequence derived from alignment at S-dermatodea_contig13003:1665..2253- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |