mRNA_S-dermatodea_contig12983.1811.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
|
Overview
Homology
BLAST of mRNA_S-dermatodea_contig12983.1811.1 vs. uniprot
Match: D8LCB5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LCB5_ECTSI) HSP 1 Score: 180 bits (456), Expect = 6.260e-54 Identity = 84/102 (82.35%), Postives = 91/102 (89.22%), Query Frame = 3
Query: 3 VGEKMGDAGDCRRLADSLKRYGIVLVLDPRVSEVDNDLFLDQMETYYAQSDGVKDARPEFSYQVGVTPEGTERPREHCERVSQLPDGHRPLTLCPPEADPKW 308
VG G+ DCR+LA++L +GIVLV DPRVSEVDN+ FLDQME YYAQSDGVKDARPEFSYQVGVTPEGTERPR HCER+SQLPDGHRPLTLCPPEADPKW
Sbjct: 15 VGGAQGNGDDCRKLAEALHAFGIVLVRDPRVSEVDNNQFLDQMEKYYAQSDGVKDARPEFSYQVGVTPEGTERPRAHCERISQLPDGHRPLTLCPPEADPKW 116
BLAST of mRNA_S-dermatodea_contig12983.1811.1 vs. uniprot
Match: A0A835ZA03_9STRA (2OG-FeII_Oxy domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZA03_9STRA) HSP 1 Score: 130 bits (326), Expect = 1.250e-34 Identity = 61/91 (67.03%), Postives = 69/91 (75.82%), Query Frame = 3
Query: 36 RRLADSLKRYGIVLVLDPRVSEVDNDLFLDQMETYYAQSDGVKDARPEFSYQVGVTPEGTERPREHCERVSQLPDGHRPLTLCPPEADPKW 308
R+ ADSL RYG+VLV DP V E DN F+D ME YY QSDGV DARPE SYQVGVTP G E PR+HC+ V+ +P RP T+CPPEADPKW
Sbjct: 5 RQAADSLHRYGVVLVRDPDVREEDNAAFIDMMERYYEQSDGVTDARPELSYQVGVTPGGVEVPRDHCDAVTAMPASARPATVCPPEADPKW 95
BLAST of mRNA_S-dermatodea_contig12983.1811.1 vs. uniprot
Match: A0A7S1XUY1_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XUY1_9STRA) HSP 1 Score: 119 bits (298), Expect = 3.400e-30 Identity = 51/95 (53.68%), Postives = 69/95 (72.63%), Query Frame = 3
Query: 24 AGDCRRLADSLKRYGIVLVLDPRVSEVDNDLFLDQMETYYAQSDGVKDARPEFSYQVGVTPEGTERPREHCERVSQLPDGHRPLTLCPPEADPKW 308
A +C ++A++L +YG +++ DPRV DND FLD ME Y+ SDG +DARPE ++QVGVTP G E+PR HC++ Q RP++LCPPE DPKW
Sbjct: 47 AAECEKVAEALHKYGALIIRDPRVRAEDNDRFLDLMERYFEMSDGERDARPEVAFQVGVTPSGKEKPRNHCDKYGQYQRKDRPVSLCPPELDPKW 141
BLAST of mRNA_S-dermatodea_contig12983.1811.1 vs. uniprot
Match: A0A7S0XDN5_9STRA (Hypothetical protein n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0XDN5_9STRA) HSP 1 Score: 116 bits (290), Expect = 2.720e-29 Identity = 47/93 (50.54%), Postives = 71/93 (76.34%), Query Frame = 3
Query: 30 DCRRLADSLKRYGIVLVLDPRVSEVDNDLFLDQMETYYAQSDGVKDARPEFSYQVGVTPEGTERPREHCERVSQLPDGHRPLTLCPPEADPKW 308
+C+++A++ +YG+ +V DPRV+E +N FL+ ME Y+ QS+G+ DARP+ SYQVGVTPE TE+PR++C ++ + +PL+ CPPE DPKW
Sbjct: 13 ECKKVAEAFHKYGVCIVKDPRVNESNNSTFLNMMEQYFEQSNGIDDARPDLSYQVGVTPERTEKPRDYCSKIGSIGPDDKPLSPCPPELDPKW 105
BLAST of mRNA_S-dermatodea_contig12983.1811.1 vs. uniprot
Match: A0A6G0W8E9_9STRA (2OG-FeII_Oxy domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0W8E9_9STRA) HSP 1 Score: 116 bits (291), Expect = 2.970e-29 Identity = 52/92 (56.52%), Postives = 69/92 (75.00%), Query Frame = 3
Query: 30 DCRRLADSLKRYGIVLVLDPRVSEVDNDLFLDQMETYYAQSDGVKDARPEFSYQVGVTPEGTERPREHCERVSQLPDGHRPLTLCPPEADPK 305
+C+++AD L +YG+++V DPR +E DN FLD ME Y+ +D V+DARPE+SYQVGVTPE E+ R HC R L +G+RP+TLCPPE D K
Sbjct: 30 ECKKVADCLYKYGVLVVRDPRATEADNGRFLDLMERYFEHTDFVQDARPEYSYQVGVTPERQEKARNHCARAETLSEGNRPVTLCPPELDKK 121
BLAST of mRNA_S-dermatodea_contig12983.1811.1 vs. uniprot
Match: A0A2P4XQH5_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XQH5_9STRA) HSP 1 Score: 110 bits (275), Expect = 3.300e-29 Identity = 50/96 (52.08%), Postives = 66/96 (68.75%), Query Frame = 3
Query: 18 GDAGDCRRLADSLKRYGIVLVLDPRVSEVDNDLFLDQMETYYAQSDGVKDARPEFSYQVGVTPEGTERPREHCERVSQLPDGHRPLTLCPPEADPK 305
GD +C + A+SL ++G++ V D R ++ DND FLD ME Y+ +D V+DARPE+ YQVGVTPE ER R HC R L + P++LCPPEAD K
Sbjct: 16 GDKAECEKAAESLHKFGVLCVRDERAADSDNDTFLDMMERYFESTDFVEDARPEYHYQVGVTPERKERARNHCARAEMLDKRYAPVSLCPPEADKK 111
BLAST of mRNA_S-dermatodea_contig12983.1811.1 vs. uniprot
Match: A0A4D9D5Q0_9STRA (2OG-FeII_Oxy domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D5Q0_9STRA) HSP 1 Score: 115 bits (289), Expect = 5.460e-29 Identity = 55/93 (59.14%), Postives = 66/93 (70.97%), Query Frame = 3
Query: 30 DCRRLADSLKRYGIVLVLDPRVSEVDNDLFLDQMETYYAQSDGVKDARPEFSYQVGVTPEGTERPREHCERVSQLPDGHRPLTLCPPEADPKW 308
+CR+ A SL+ G + V D RV E D++ FLD +E+Y+A SDG +DARP+ YQVGVTP E PR HC R S LP HRPLTLCPP ADPKW
Sbjct: 27 ECRKAALSLETTGCLYVRDSRVREADSNAFLDMLESYFAASDGKRDARPDLYYQVGVTPAMIETPRNHCTRASSLPLLHRPLTLCPPHADPKW 119
BLAST of mRNA_S-dermatodea_contig12983.1811.1 vs. uniprot
Match: A0A0P1APJ8_PLAHL (Isopenicillin N synthase-like n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1APJ8_PLAHL) HSP 1 Score: 115 bits (288), Expect = 6.810e-29 Identity = 53/96 (55.21%), Postives = 67/96 (69.79%), Query Frame = 3
Query: 18 GDAGDCRRLADSLKRYGIVLVLDPRVSEVDNDLFLDQMETYYAQSDGVKDARPEFSYQVGVTPEGTERPREHCERVSQLPDGHRPLTLCPPEADPK 305
G +C + ADSL R+G+ V D R ++ DND FLD ME Y+ +D ++DARPE+ YQVGVTPEG ER R HC RV +L H P++LCPPEAD K
Sbjct: 16 GSKAECEKAADSLHRFGVFCVRDERAADSDNDAFLDMMERYFESADFLEDARPEYHYQVGVTPEGKERARNHCARVEKLEKQHVPVSLCPPEADKK 111
BLAST of mRNA_S-dermatodea_contig12983.1811.1 vs. uniprot
Match: A0A485KKI3_9STRA (Aste57867_8531 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KKI3_9STRA) HSP 1 Score: 115 bits (287), Expect = 1.110e-28 Identity = 51/92 (55.43%), Postives = 68/92 (73.91%), Query Frame = 3
Query: 30 DCRRLADSLKRYGIVLVLDPRVSEVDNDLFLDQMETYYAQSDGVKDARPEFSYQVGVTPEGTERPREHCERVSQLPDGHRPLTLCPPEADPK 305
+C+++AD L +YG+++V DPR +E DN FLD ME Y+ +D V+DARPE+S+QVGVTPE E+ R HC R L + HRP+TLCPPE D K
Sbjct: 29 ECKKVADCLHKYGVLVVRDPRATEADNGRFLDLMERYFEHTDFVQDARPEYSFQVGVTPEEQEKARNHCTRAEHLEEVHRPVTLCPPELDKK 120
BLAST of mRNA_S-dermatodea_contig12983.1811.1 vs. uniprot
Match: A0A3R6Y8Z9_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A3R6Y8Z9_9STRA) HSP 1 Score: 112 bits (281), Expect = 1.640e-28 Identity = 50/92 (54.35%), Postives = 68/92 (73.91%), Query Frame = 3
Query: 30 DCRRLADSLKRYGIVLVLDPRVSEVDNDLFLDQMETYYAQSDGVKDARPEFSYQVGVTPEGTERPREHCERVSQLPDGHRPLTLCPPEADPK 305
+C ++A+ L ++G+++V DPR +E DN+ FLD ME Y+ ++D V+DARPE+SYQVGVTPE E+ R HC R L HRP+TLCPPE D K
Sbjct: 31 ECNKVAECLHKFGVLVVRDPRATEADNNRFLDLMERYFERTDFVEDARPEYSYQVGVTPEQQEKARNHCTRAEGLAKEHRPITLCPPELDKK 122 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig12983.1811.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig12983.1811.1 >prot_S-dermatodea_contig12983.1811.1 ID=prot_S-dermatodea_contig12983.1811.1|Name=mRNA_S-dermatodea_contig12983.1811.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=98bp MGDAGDCRRLADSLKRYGIVLVLDPRVSEVDNDLFLDQMETYYAQSDGVKback to top mRNA from alignment at S-dermatodea_contig12983:5102..6424+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig12983.1811.1 ID=mRNA_S-dermatodea_contig12983.1811.1|Name=mRNA_S-dermatodea_contig12983.1811.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=1323bp|location=Sequence derived from alignment at S-dermatodea_contig12983:5102..6424+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig12983:5102..6424+ >mRNA_S-dermatodea_contig12983.1811.1 ID=mRNA_S-dermatodea_contig12983.1811.1|Name=mRNA_S-dermatodea_contig12983.1811.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=588bp|location=Sequence derived from alignment at S-dermatodea_contig12983:5102..6424+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |