prot_S-dermatodea_contig1298.1805.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig1298.1805.1
Unique Nameprot_S-dermatodea_contig1298.1805.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length187
Homology
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BLAST of mRNA_S-dermatodea_contig1298.1805.1 vs. uniprot
Match: D8LTI3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTI3_ECTSI)

HSP 1 Score: 125 bits (315), Expect = 2.410e-30
Identity = 69/120 (57.50%), Postives = 83/120 (69.17%), Query Frame = 0 
Query:   30 EHMSRAQVEACTALITNFPAAVPPGQREPMLESFTALGALIVWPRPDEALATFPTPALARQALSF----NTILAVELLSQAREEKRKAYQRVELARPGRPPADVSSASRLIFSGLGISRP 145
            E MSR QVEACTA+++NFP A+PPGQR+ ML+SF +LG L+VWPRPDEAL TF TPALARQA+S     +++L VELLSQAR EKR  Y+R        P  DV S     +S  G S P
Sbjct:  442 EEMSREQVEACTAVVSNFPVALPPGQRDSMLQSFVSLGGLVVWPRPDEALVTFATPALARQAVSARNNRDSVLFVELLSQARVEKRTGYRRGGAFLSKNPKLDVKSERHETWSWQGTSTP 561
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BLAST of mRNA_S-dermatodea_contig1298.1805.1 vs. uniprot
Match: A0A6H5JL83_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL83_9PHAE)

HSP 1 Score: 115 bits (289), Expect = 1.410e-26
Identity = 59/91 (64.84%), Postives = 72/91 (79.12%), Query Frame = 0 
Query:   30 EHMSRAQVEACTALITNFPAAVPPGQREPMLESFTALGALIVWPRPDEALATFPTPALARQALSF----NTILAVELLSQAREEKRKAYQR 116
            E MSR QVEACTA+++NFP A+PPGQR+ ML+S  +LG L+VWPRPDEAL TF TPALARQA+S     +++L VELLS AR EKR  Y+R
Sbjct:  442 EEMSREQVEACTAVVSNFPVALPPGQRDSMLQSLVSLGGLVVWPRPDEALVTFATPALARQAVSARNNRDSVLLVELLSLARLEKRTGYRR 532
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig1298.1805.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LTI3_ECTSI2.410e-3057.50Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JL83_9PHAE1.410e-2664.84Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig1298contigS-dermatodea_contig1298:197..1838 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig1298.1805.1mRNA_S-dermatodea_contig1298.1805.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig1298 2..2157 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig1298.1805.1 ID=prot_S-dermatodea_contig1298.1805.1|Name=mRNA_S-dermatodea_contig1298.1805.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=187bp
MSPHPPLSRLTIPSSVTHSSYLRCCAVCIEHMSRAQVEACTALITNFPAA
VPPGQREPMLESFTALGALIVWPRPDEALATFPTPALARQALSFNTILAV
ELLSQAREEKRKAYQRVELARPGRPPADVSSASRLIFSGLGISRPRARPT
GTSAGKSNSTGSSKGRIRGRGAKTAQATESTDSWDL*
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