prot_S-dermatodea_contig1295.1793.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig1295.1793.1
Unique Nameprot_S-dermatodea_contig1295.1793.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length80
Homology
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BLAST of mRNA_S-dermatodea_contig1295.1793.1 vs. uniprot
Match: A0A6H5L5L6_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5L6_9PHAE)

HSP 1 Score: 64.7 bits (156), Expect = 1.620e-11
Identity = 33/70 (47.14%), Postives = 44/70 (62.86%), Query Frame = 0 
Query:   12 WASTGRKKFRVLSVVARSVLGAPGSAAVLERDFGEAGKLVDRRRGSLGPAYVEMVMFLRG--DYIPEDVP 79
            W       + +L+  AR V GAP SAAVLE DFG+AG+++   R +    YVEM++FL G  D IPED+P
Sbjct:   40 WWKRWMSSYPLLARAARVVFGAPASAAVLEGDFGDAGRIMTSSRSTTDAKYVEMILFLHGNLDLIPEDIP 109
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BLAST of mRNA_S-dermatodea_contig1295.1793.1 vs. uniprot
Match: A0A6H5JZ82_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZ82_9PHAE)

HSP 1 Score: 65.5 bits (158), Expect = 1.320e-10
Identity = 36/75 (48.00%), Postives = 48/75 (64.00%), Query Frame = 0 
Query:    6 EEVTAFWASTGRKKFRVLSVVARSVLGAPGSAAVLERDFGEAGKLVDRRRGSLGPAYVEMVMFLRG--DYIPEDV 78
            E+V  +W       + +L+ VAR V GAP SAAVLERDF  AG+++   R ++   YVEM+MFL G  D IPED+
Sbjct:  605 EDVLKWWKMWAHA-YPLLARVARVVFGAPASAAVLERDFSNAGRMMTSSRSTMDSKYVEMIMFLHGNLDLIPEDI 678
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BLAST of mRNA_S-dermatodea_contig1295.1793.1 vs. uniprot
Match: A0A6H5KCJ3_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCJ3_9PHAE)

HSP 1 Score: 58.2 bits (139), Expect = 3.920e-9
Identity = 32/62 (51.61%), Postives = 43/62 (69.35%), Query Frame = 0 
Query:   20 FRVLSVVARSVLGAPGSAAVLERDFGEAGKLVDRRRGSL-GPAYVEMVMFLRG--DYIPEDV 78
            + +L+ VAR V GAP SAAVLERDF  AG+++   R ++    YVEM++FL G  D IPED+
Sbjct:    6 YPLLARVARVVFGAPASAAVLERDFSNAGRMMTSSRRTMDSTTYVEMILFLHGNLDLIPEDI 67
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BLAST of mRNA_S-dermatodea_contig1295.1793.1 vs. uniprot
Match: A0A6H5KW12_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW12_9PHAE)

HSP 1 Score: 57.8 bits (138), Expect = 5.540e-9
Identity = 32/66 (48.48%), Postives = 43/66 (65.15%), Query Frame = 0 
Query:   16 GRKKFRVLSVVARSVLGAPGSAAVLERDFGEAGKLVDRRRGSLGPAY-VEMVMFLRG--DYIPEDV 78
            G   + +L+ VAR V GAP SAA LERDF  AG+++   R ++   Y VEM++FL G  D IPED+
Sbjct:    2 GTHAYLLLTGVARVVFGAPASAAALERDFSNAGRMMTSSRSAMDSKYYVEMILFLHGNLDLIPEDI 67
[Close]
BLAST of mRNA_S-dermatodea_contig1295.1793.1 vs. uniprot
Match: A0A6H5JNY1_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNY1_9PHAE)

HSP 1 Score: 59.3 bits (142), Expect = 1.910e-8
Identity = 33/75 (44.00%), Postives = 47/75 (62.67%), Query Frame = 0 
Query:    6 EEVTAFWASTGRKKFRVLSVVARSVLGAPGSAAVLERDFGEAGKLVDRRRGSLGPAYVEMVMFLRG--DYIPEDV 78
            E+V  +W       + +L+ VAR V+GA  SAAVLE DF  AG+++   R ++   YVEM++FL G  D IPED+
Sbjct:  378 EDVLKWWKMWAHA-YPLLARVARVVIGALASAAVLEHDFSNAGRMMTSSRSTMDSKYVEMILFLHGNLDLIPEDI 451
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig1295.1793.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5L5L6_9PHAE1.620e-1147.14Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A6H5JZ82_9PHAE1.320e-1048.00Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A6H5KCJ3_9PHAE3.920e-951.61Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A6H5KW12_9PHAE5.540e-948.48Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A6H5JNY1_9PHAE1.910e-844.00Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008906HAT, C-terminal dimerisation domainPFAMPF05699Dimer_Tnp_hATcoord: 7..71
e-value: 6.1E-9
score: 35.6
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 3..70

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig1295contigS-dermatodea_contig1295:21039..21278 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig1295.1793.1mRNA_S-dermatodea_contig1295.1793.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig1295 21039..21278 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig1295.1793.1 ID=prot_S-dermatodea_contig1295.1793.1|Name=mRNA_S-dermatodea_contig1295.1793.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=80bp
MLQTGEEVTAFWASTGRKKFRVLSVVARSVLGAPGSAAVLERDFGEAGKL
VDRRRGSLGPAYVEMVMFLRGDYIPEDVPE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008906HATC_C_dom
IPR012337RNaseH-like_sf