prot_S-dermatodea_contig994.17867.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig994.17867.1
Unique Nameprot_S-dermatodea_contig994.17867.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length51
Homology
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BLAST of mRNA_S-dermatodea_contig994.17867.1 vs. uniprot
Match: D8LKV5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKV5_ECTSI)

HSP 1 Score: 80.1 bits (196), Expect = 2.770e-16
Identity = 35/50 (70.00%), Postives = 41/50 (82.00%), Query Frame = 0 
Query:    1 MKFSVNPFRIAMDLLGPKTFYKILCCCLCITVMVAFAVAGNYITAFESIF 50
            MKFS NPFR++M LLGPK FYK++CCCLC+ +    AVAGNYIT FESIF
Sbjct: 2006 MKFSFNPFRLSMSLLGPKAFYKVVCCCLCVILAAFIAVAGNYITTFESIF 2055
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BLAST of mRNA_S-dermatodea_contig994.17867.1 vs. uniprot
Match: A0A6H5JGY8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGY8_9PHAE)

HSP 1 Score: 78.2 bits (191), Expect = 1.320e-15
Identity = 33/50 (66.00%), Postives = 41/50 (82.00%), Query Frame = 0 
Query:    1 MKFSVNPFRIAMDLLGPKTFYKILCCCLCITVMVAFAVAGNYITAFESIF 50
            MKFS NPFR++M LLGPK FYK++CCC+C+ +    AVAGNYIT FES+F
Sbjct: 2095 MKFSFNPFRLSMSLLGPKAFYKVVCCCVCVILAAFIAVAGNYITTFESLF 2144
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig994.17867.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LKV5_ECTSI2.770e-1670.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JGY8_9PHAE1.320e-1566.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 20..43
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..19
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 44..50
NoneNo IPR availableTMHMMTMhelixcoord: 21..43

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig994contigS-dermatodea_contig994:14484..15191 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig994.17867.1mRNA_S-dermatodea_contig994.17867.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig994 13791..15308 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig994.17867.1 ID=prot_S-dermatodea_contig994.17867.1|Name=mRNA_S-dermatodea_contig994.17867.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=51bp
MKFSVNPFRIAMDLLGPKTFYKILCCCLCITVMVAFAVAGNYITAFESIF
*
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