mRNA_S-dermatodea_contig994.17867.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig994.17867.1 vs. uniprot
Match: D8LKV5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKV5_ECTSI) HSP 1 Score: 150 bits (379), Expect = 9.290e-37 Identity = 68/89 (76.40%), Postives = 78/89 (87.64%), Query Frame = 1
Query: 1 GKVLISLELLPKDAADAQAVGSGRNEPNQNPYLPPPSGRMKFSVNPFRIAMDLLGPKTFYKILCCCLCITVMVAFAVAGNYITAFESIF 267
GKVLISLELLPK+ ADAQ VG+GRN+PNQNPYLPPP+GRMKFS NPFR++M LLGPK FYK++CCCLC+ + AVAGNYIT FESIF
Sbjct: 1967 GKVLISLELLPKETADAQPVGAGRNDPNQNPYLPPPAGRMKFSFNPFRLSMSLLGPKAFYKVVCCCLCVILAAFIAVAGNYITTFESIF 2055
BLAST of mRNA_S-dermatodea_contig994.17867.1 vs. uniprot
Match: A0A6H5JGY8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGY8_9PHAE) HSP 1 Score: 148 bits (374), Expect = 4.300e-36 Identity = 66/89 (74.16%), Postives = 78/89 (87.64%), Query Frame = 1
Query: 1 GKVLISLELLPKDAADAQAVGSGRNEPNQNPYLPPPSGRMKFSVNPFRIAMDLLGPKTFYKILCCCLCITVMVAFAVAGNYITAFESIF 267
GKVLISLELLPK+ ADAQ VG+GRN+PNQNPYLPPP+GRMKFS NPFR++M LLGPK FYK++CCC+C+ + AVAGNYIT FES+F
Sbjct: 2056 GKVLISLELLPKETADAQPVGAGRNDPNQNPYLPPPAGRMKFSFNPFRLSMSLLGPKAFYKVVCCCVCVILAAFIAVAGNYITTFESLF 2144
BLAST of mRNA_S-dermatodea_contig994.17867.1 vs. uniprot
Match: A0A7S2G2Q7_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G2Q7_9STRA) HSP 1 Score: 90.9 bits (224), Expect = 3.890e-19 Identity = 43/89 (48.31%), Postives = 56/89 (62.92%), Query Frame = 1
Query: 1 GKVLISLELLPKDAADAQAVGSGRNEPNQNPYLPPPSGRMKFSVNPFRIAMDLLGPKTFYKILCCCLCITVMVAFAVAGNYITAFESIF 267
GK+ I L+LLPK AD + G GRN+PN NP LPPP GRMKFS+NPF + +L GPK ++ CC +C+ VM + F +IF
Sbjct: 20 GKMCIGLKLLPKSIADKEPAGFGRNDPNSNPTLPPPVGRMKFSLNPFVMGAELCGPKLCAQLTCCLVCLGVMALLIFCQPVLNLFIAIF 108
BLAST of mRNA_S-dermatodea_contig994.17867.1 vs. uniprot
Match: A0A6G0WJX2_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WJX2_9STRA) HSP 1 Score: 95.5 bits (236), Expect = 5.670e-18 Identity = 44/82 (53.66%), Postives = 58/82 (70.73%), Query Frame = 1
Query: 1 GKVLISLELLPKDAADAQAVGSGRNEPNQNPYLPPPSGRMKFSVNPFRIAMDLLGPKTFYKILCCCLCITVMVAFAVAGNYI 246
G V IS+EL+P + A Q+VG GR++PN NP+LPPPSGR+KFS+NPF + LLGPK + +CC C+ VMVA G +I
Sbjct: 1698 GAVCISMELVPIEKAKIQSVGFGRSDPNNNPFLPPPSGRLKFSMNPFYVFNQLLGPKICRRFMCCLCCVAVMVAMYFLGPFI 1779
BLAST of mRNA_S-dermatodea_contig994.17867.1 vs. uniprot
Match: A0A7S3XX73_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XX73_HETAK) HSP 1 Score: 88.6 bits (218), Expect = 9.620e-18 Identity = 43/88 (48.86%), Postives = 57/88 (64.77%), Query Frame = 1
Query: 1 GKVLISLELLPKDAADAQAVGSGRNEPNQNPYLPPPSGRMKFSVNPFRIAMDLLGPKTFYKILCCCLCITVMVAFAVAGNYITAFESI 264
GKV +S+ + PKD A+AQ VG GR+ PN NPY PPP GR+KFS+NPF + LLGPK ++CC +V FA+ Y + F +I
Sbjct: 66 GKVCLSISIYPKDQANAQPVGFGRSAPNMNPYCPPPVGRLKFSLNPFSMLSQLLGPKITCYVICCLF----LVLFALLSIYCSPFLNI 149
BLAST of mRNA_S-dermatodea_contig994.17867.1 vs. uniprot
Match: A0A485LLW0_9STRA (Aste57867_22404 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LLW0_9STRA) HSP 1 Score: 94.0 bits (232), Expect = 1.880e-17 Identity = 41/82 (50.00%), Postives = 56/82 (68.29%), Query Frame = 1
Query: 1 GKVLISLELLPKDAADAQAVGSGRNEPNQNPYLPPPSGRMKFSVNPFRIAMDLLGPKTFYKILCCCLCITVMVAFAVAGNYI 246
G V IS+EL+P + A Q VG GRN+PN PYLPPP+GR+K S+NPF + +LLGPK ++ +CC C+ +M A G +I
Sbjct: 1727 GAVCISMELVPIEKAKIQTVGFGRNDPNNGPYLPPPAGRLKLSINPFYVFNELLGPKICHRFMCCLCCLAIMAAMYFVGPFI 1808
BLAST of mRNA_S-dermatodea_contig994.17867.1 vs. uniprot
Match: A0A7S1XSX0_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XSX0_9STRA) HSP 1 Score: 86.7 bits (213), Expect = 4.860e-17 Identity = 42/89 (47.19%), Postives = 55/89 (61.80%), Query Frame = 1
Query: 1 GKVLISLELLPKDAADAQAVGSGRNEPNQNPYLPPPSGRMKFSVNPFRIAMDLLGPKTFYKILCCCLCITVMVAFAVAGNYITAFESIF 267
GKV IS+E++PKD A+ A G GR+EPN NP+LPPP GR++FS NPF + L GPK + CC +CI + A T S+F
Sbjct: 61 GKVCISVEIVPKDYANMIAAGDGRSEPNANPFLPPPPGRLQFSWNPFVMGSRLCGPKLCFYFTCCLICIVFALLLIFAQPVFTFLISLF 149
BLAST of mRNA_S-dermatodea_contig994.17867.1 vs. uniprot
Match: A0A067CD61_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CD61_SAPPC) HSP 1 Score: 92.4 bits (228), Expect = 6.150e-17 Identity = 41/82 (50.00%), Postives = 58/82 (70.73%), Query Frame = 1
Query: 1 GKVLISLELLPKDAADAQAVGSGRNEPNQNPYLPPPSGRMKFSVNPFRIAMDLLGPKTFYKILCCCLCITVMVAFAVAGNYI 246
G + IS+EL+P D A Q VG GR++PN +P+LPPP+GR+KFS+NPF + +LLGPK ++++CC CI +MV G I
Sbjct: 1671 GALCISMELVPIDKAKVQTVGFGRSDPNNSPFLPPPAGRLKFSMNPFYVFNELLGPKICHRVMCCLCCILIMVLMYFLGPII 1752
BLAST of mRNA_S-dermatodea_contig994.17867.1 vs. uniprot
Match: A0A8K1FFZ5_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FFZ5_PYTOL) HSP 1 Score: 91.7 bits (226), Expect = 1.120e-16 Identity = 41/82 (50.00%), Postives = 54/82 (65.85%), Query Frame = 1
Query: 1 GKVLISLELLPKDAADAQAVGSGRNEPNQNPYLPPPSGRMKFSVNPFRIAMDLLGPKTFYKILCCCLCITVMVAFAVAGNYI 246
G+V +S+EL+P + A Q VG GR PN +PYLPPPSGR+ FS+NPF++ DLLGP +ILCC C+ MV +I
Sbjct: 1663 GEVCVSMELVPSEKAKQQHVGQGRQSPNHSPYLPPPSGRLSFSLNPFKVMNDLLGPSICNRILCCLCCVVFMVIIYFLAPFI 1744
BLAST of mRNA_S-dermatodea_contig994.17867.1 vs. uniprot
Match: A0A5D6XHY7_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XHY7_9STRA) HSP 1 Score: 90.9 bits (224), Expect = 2.030e-16 Identity = 40/82 (48.78%), Postives = 56/82 (68.29%), Query Frame = 1
Query: 1 GKVLISLELLPKDAADAQAVGSGRNEPNQNPYLPPPSGRMKFSVNPFRIAMDLLGPKTFYKILCCCLCITVMVAFAVAGNYI 246
G+V +S+EL+P + A Q VG+GR+ PN +PYLPPP+GR+ FS+NPF++ DLLGP +ILCC C+ MV +I
Sbjct: 1686 GEVCVSMELVPMEKAKQQPVGNGRSAPNNSPYLPPPAGRLSFSLNPFKVFNDLLGPSICNRILCCLCCVVFMVVIYFLAPFI 1767 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig994.17867.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig994.17867.1 >prot_S-dermatodea_contig994.17867.1 ID=prot_S-dermatodea_contig994.17867.1|Name=mRNA_S-dermatodea_contig994.17867.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=51bp MKFSVNPFRIAMDLLGPKTFYKILCCCLCITVMVAFAVAGNYITAFESIFback to top mRNA from alignment at S-dermatodea_contig994:13791..15308- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig994.17867.1 ID=mRNA_S-dermatodea_contig994.17867.1|Name=mRNA_S-dermatodea_contig994.17867.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=1518bp|location=Sequence derived from alignment at S-dermatodea_contig994:13791..15308- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig994:13791..15308- >mRNA_S-dermatodea_contig994.17867.1 ID=mRNA_S-dermatodea_contig994.17867.1|Name=mRNA_S-dermatodea_contig994.17867.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=306bp|location=Sequence derived from alignment at S-dermatodea_contig994:13791..15308- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |