prot_S-dermatodea_contig9696.17698.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig9696.17698.1
Unique Nameprot_S-dermatodea_contig9696.17698.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length100
Homology
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BLAST of mRNA_S-dermatodea_contig9696.17698.1 vs. uniprot
Match: D8LDF9_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDF9_ECTSI)

HSP 1 Score: 92.8 bits (229), Expect = 6.360e-20
Identity = 48/80 (60.00%), Postives = 60/80 (75.00%), Query Frame = 0 
Query:   21 VQQGPVSDVLEALLCSTLVTSGGERILAPTFPRISAQHELKYCGPVGPLQASAMAAAISARPGVLIHLNLGGKRLGDEGA 100
            V++GP+ D L ALL ST++   G R+LAP+FP ISA  ELKY  P+GP QASA+  AI ARPGVL+ L+L GKR+GD GA
Sbjct:  279 VREGPLRDALAALLTSTVMGEDGGRVLAPSFPSISALCELKYSEPIGPPQASAVERAILARPGVLLRLSLAGKRIGDRGA 358
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BLAST of mRNA_S-dermatodea_contig9696.17698.1 vs. uniprot
Match: A0A6H5JCJ5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCJ5_9PHAE)

HSP 1 Score: 70.1 bits (170), Expect = 6.630e-12
Identity = 42/94 (44.68%), Postives = 56/94 (59.57%), Query Frame = 0 
Query:    8 RPSSFPTRRNLGTVQQGPVSDVLEALLCSTLVTSGGERILAPTFPRISAQHELKYCGPVGPLQASAMAAAISARPGVL---IHLNLGGKRLGDE 98
            RPS       L  V++GP+ D L ALL ST++   G R+LAP+FP ISA  ELKY  P+GP QASA+   I AR  +L   + +NL  +   D+
Sbjct:  264 RPSKPGEEALLRGVREGPLRDALAALLTSTVMGEDGGRVLAPSFPSISAMCELKYSEPIGPRQASAVERVILARSVILSLVVSINLANRLANDK 357
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig9696.17698.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LDF9_ECTSI6.360e-2060.00Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
A0A6H5JCJ5_9PHAE6.630e-1244.68Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig9696contigS-dermatodea_contig9696:2519..4506 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig9696.17698.1mRNA_S-dermatodea_contig9696.17698.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig9696 2519..4506 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig9696.17698.1 ID=prot_S-dermatodea_contig9696.17698.1|Name=mRNA_S-dermatodea_contig9696.17698.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=100bp
SGALRSPRPSSFPTRRNLGTVQQGPVSDVLEALLCSTLVTSGGERILAPT
FPRISAQHELKYCGPVGPLQASAMAAAISARPGVLIHLNLGGKRLGDEGA
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