prot_S-dermatodea_contig96535.17663.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig96535.17663.1
Unique Nameprot_S-dermatodea_contig96535.17663.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length97
Homology
[Close]
BLAST of mRNA_S-dermatodea_contig96535.17663.1 vs. uniprot
Match: A0A8F0JWX3_9PHAE (Ribosomal protein S2 n=1 Tax=Protohalopteris sp. TaxID=2843287 RepID=A0A8F0JWX3_9PHAE)

HSP 1 Score: 190 bits (483), Expect = 1.660e-59
Identity = 90/97 (92.78%), Postives = 92/97 (94.85%), Query Frame = 0 
Query:    1 MAKIELAQLLEAGVHFGHKAQRWNPKMFPYIYAERNGVHILDLIQTTEFLKRACDFSKKAAQKNQTFLFVGTKKQAAFLIAKEAQRCGAFYINHRWL 97
            MAKIELAQLL+AGVH GHKA RWNPKMFPYIY ERNGVHILDLIQTTEFLKRACDFSKKAAQKNQTFLFVGTKKQAA LIA EAQRCGAFY+NHRWL
Sbjct:    1 MAKIELAQLLDAGVHLGHKAHRWNPKMFPYIYTERNGVHILDLIQTTEFLKRACDFSKKAAQKNQTFLFVGTKKQAASLIANEAQRCGAFYVNHRWL 97
[Close]
BLAST of mRNA_S-dermatodea_contig96535.17663.1 vs. uniprot
Match: D1GJH5_FUCVE (30S ribosomal protein S2, chloroplastic n=41 Tax=Phaeophyceae TaxID=2870 RepID=D1GJH5_FUCVE)

HSP 1 Score: 190 bits (482), Expect = 2.500e-59
Identity = 89/97 (91.75%), Postives = 94/97 (96.91%), Query Frame = 0 
Query:    1 MAKIELAQLLEAGVHFGHKAQRWNPKMFPYIYAERNGVHILDLIQTTEFLKRACDFSKKAAQKNQTFLFVGTKKQAAFLIAKEAQRCGAFYINHRWL 97
            MAKIELAQLLEAGVHFGHKAQRWNPKMFPYIYAERNG+HILDLIQTTEFLKRACDFSKKA+ KNQTFLFVGTKK+A+ LIA EAQ+CGAFYINHRWL
Sbjct:    1 MAKIELAQLLEAGVHFGHKAQRWNPKMFPYIYAERNGIHILDLIQTTEFLKRACDFSKKASAKNQTFLFVGTKKRASSLIASEAQKCGAFYINHRWL 97
[Close]
BLAST of mRNA_S-dermatodea_contig96535.17663.1 vs. uniprot
Match: A0A141BSD4_9PHAE (30S ribosomal protein S2, chloroplastic n=12 Tax=Sargassaceae TaxID=3014 RepID=A0A141BSD4_9PHAE)

HSP 1 Score: 188 bits (477), Expect = 1.440e-58
Identity = 87/97 (89.69%), Postives = 92/97 (94.85%), Query Frame = 0 
Query:    1 MAKIELAQLLEAGVHFGHKAQRWNPKMFPYIYAERNGVHILDLIQTTEFLKRACDFSKKAAQKNQTFLFVGTKKQAAFLIAKEAQRCGAFYINHRWL 97
            MAKIELAQLLEAGVHFGHKAQRWNPKMFPYIYAERNG+HILDLIQTTEFLKRACDFSKKA+ KNQTFLFVGTK+  A L+A EAQ+CGAFYINHRWL
Sbjct:    1 MAKIELAQLLEAGVHFGHKAQRWNPKMFPYIYAERNGIHILDLIQTTEFLKRACDFSKKASSKNQTFLFVGTKRHTASLVASEAQKCGAFYINHRWL 97
[Close]
BLAST of mRNA_S-dermatodea_contig96535.17663.1 vs. uniprot
Match: A0A8F0K065_9PHAE (Ribosomal protein S2 n=1 Tax=Desmarestia aculeata TaxID=62298 RepID=A0A8F0K065_9PHAE)

HSP 1 Score: 187 bits (474), Expect = 4.360e-58
Identity = 88/97 (90.72%), Postives = 91/97 (93.81%), Query Frame = 0 
Query:    1 MAKIELAQLLEAGVHFGHKAQRWNPKMFPYIYAERNGVHILDLIQTTEFLKRACDFSKKAAQKNQTFLFVGTKKQAAFLIAKEAQRCGAFYINHRWL 97
            MAKIELAQLL+AGVHFGHKA RWNPKMFPYIYAERNG+HILDLIQTTEFLKRACDFSKKAA+KNQTFLFVGTKKQ A LIA EA  CGAFYINHRWL
Sbjct:    1 MAKIELAQLLDAGVHFGHKANRWNPKMFPYIYAERNGIHILDLIQTTEFLKRACDFSKKAARKNQTFLFVGTKKQTASLIANEATNCGAFYINHRWL 97
[Close]
BLAST of mRNA_S-dermatodea_contig96535.17663.1 vs. uniprot
Match: A0A1I9LVT4_9PHAE (30S ribosomal protein S2, chloroplastic n=1 Tax=Pleurocladia lacustris TaxID=246121 RepID=A0A1I9LVT4_9PHAE)

HSP 1 Score: 182 bits (463), Expect = 1.920e-56
Identity = 85/97 (87.63%), Postives = 92/97 (94.85%), Query Frame = 0 
Query:    1 MAKIELAQLLEAGVHFGHKAQRWNPKMFPYIYAERNGVHILDLIQTTEFLKRACDFSKKAAQKNQTFLFVGTKKQAAFLIAKEAQRCGAFYINHRWL 97
            MAKIELAQLL+AGVHFGHKA RWNPKMFPYIYAERNG+HILDLIQT EFLKRACDFSK+A++K QTFLFVGTKKQ+A LIA EAQ+CGAFYINHRWL
Sbjct:    1 MAKIELAQLLDAGVHFGHKAHRWNPKMFPYIYAERNGIHILDLIQTMEFLKRACDFSKRASEKKQTFLFVGTKKQSASLIAIEAQKCGAFYINHRWL 97
[Close]
BLAST of mRNA_S-dermatodea_contig96535.17663.1 vs. uniprot
Match: A0A8E5XRD1_9PHAE (30S ribosomal protein S2, chloroplastic n=1 Tax=Ishige okamurae TaxID=233772 RepID=A0A8E5XRD1_9PHAE)

HSP 1 Score: 169 bits (428), Expect = 3.890e-51
Identity = 77/97 (79.38%), Postives = 88/97 (90.72%), Query Frame = 0 
Query:    1 MAKIELAQLLEAGVHFGHKAQRWNPKMFPYIYAERNGVHILDLIQTTEFLKRACDFSKKAAQKNQTFLFVGTKKQAAFLIAKEAQRCGAFYINHRWL 97
            MAKIELAQLLEAGVHFGHKA+RWNPKMFP+IYAERNG+HILDLIQT + LK ACDFS K A+ N+TFLF+GTK+QAA +IA  +QRCGAFY+NHRWL
Sbjct:    1 MAKIELAQLLEAGVHFGHKAKRWNPKMFPHIYAERNGIHILDLIQTAQLLKVACDFSTKIAKNNKTFLFIGTKRQAAAVIAHASQRCGAFYVNHRWL 97
[Close]
BLAST of mRNA_S-dermatodea_contig96535.17663.1 vs. uniprot
Match: A0A7S6U9Z1_9STRA (30S ribosomal protein S2, chloroplastic n=1 Tax=Schizocladia ischiensis TaxID=196139 RepID=A0A7S6U9Z1_9STRA)

HSP 1 Score: 167 bits (423), Expect = 2.290e-50
Identity = 78/97 (80.41%), Postives = 87/97 (89.69%), Query Frame = 0 
Query:    1 MAKIELAQLLEAGVHFGHKAQRWNPKMFPYIYAERNGVHILDLIQTTEFLKRACDFSKKAAQKNQTFLFVGTKKQAAFLIAKEAQRCGAFYINHRWL 97
            MAKI+LAQLL+AGVHFGHKA RWNPKMFPYIY ERNGVHILDLIQT E LKRACDF + AA++N+TFLFVGTKKQA+ +IA EA RCGA Y+NHRWL
Sbjct:    1 MAKIKLAQLLKAGVHFGHKAYRWNPKMFPYIYTERNGVHILDLIQTAELLKRACDFCEIAAKQNKTFLFVGTKKQASSIIASEATRCGANYVNHRWL 97
[Close]
BLAST of mRNA_S-dermatodea_contig96535.17663.1 vs. uniprot
Match: A0A7T8JK39_9CRYP (30S ribosomal protein S2, chloroplastic n=1 Tax=Cryptophyta sp. CCMP2293 TaxID=697907 RepID=A0A7T8JK39_9CRYP)

HSP 1 Score: 157 bits (398), Expect = 1.860e-46
Identity = 67/97 (69.07%), Postives = 88/97 (90.72%), Query Frame = 0 
Query:    1 MAKIELAQLLEAGVHFGHKAQRWNPKMFPYIYAERNGVHILDLIQTTEFLKRACDFSKKAAQKNQTFLFVGTKKQAAFLIAKEAQRCGAFYINHRWL 97
            MA + LA+LLEAGVHFGH+A+RWNPKMFPYIYAERNG+HI+DL+QT + L +AC+F+K AA++ +TFLFVGTK+QAA ++A+EA+RCGA+Y+N RWL
Sbjct:    1 MAVVSLAELLEAGVHFGHQARRWNPKMFPYIYAERNGIHIIDLVQTAQLLTQACNFTKAAAEEGKTFLFVGTKRQAAGIVAQEAERCGAYYVNQRWL 97
[Close]
BLAST of mRNA_S-dermatodea_contig96535.17663.1 vs. uniprot
Match: RR2_GUITH (30S ribosomal protein S2, chloroplastic n=2 Tax=Guillardia theta TaxID=55529 RepID=RR2_GUITH)

HSP 1 Score: 154 bits (388), Expect = 4.970e-45
Identity = 67/94 (71.28%), Postives = 84/94 (89.36%), Query Frame = 0 
Query:    4 IELAQLLEAGVHFGHKAQRWNPKMFPYIYAERNGVHILDLIQTTEFLKRACDFSKKAAQKNQTFLFVGTKKQAAFLIAKEAQRCGAFYINHRWL 97
            I LA+LLE+GVHFGH+A+RWNPKMFPYIYAERNG+HI+DL+QT + L  AC+F KK+A++ + FLFVGTK+QAA +IA+EA+RCGAFYIN RWL
Sbjct:    3 ITLAELLESGVHFGHQARRWNPKMFPYIYAERNGIHIIDLVQTAQLLTEACEFVKKSAEEGKKFLFVGTKRQAASIIAQEAERCGAFYINQRWL 96
[Close]
BLAST of mRNA_S-dermatodea_contig96535.17663.1 vs. uniprot
Match: A0A2I4Q2U3_9PHAE (30S ribosomal protein S2, chloroplastic n=1 Tax=Dictyopteris divaricata TaxID=156996 RepID=A0A2I4Q2U3_9PHAE)

HSP 1 Score: 153 bits (387), Expect = 6.290e-45
Identity = 70/97 (72.16%), Postives = 80/97 (82.47%), Query Frame = 0 
Query:    1 MAKIELAQLLEAGVHFGHKAQRWNPKMFPYIYAERNGVHILDLIQTTEFLKRACDFSKKAAQKNQTFLFVGTKKQAAFLIAKEAQRCGAFYINHRWL 97
            M KIELA LL+AGVH GHKA RWNPKMFPYIY ERN VHI+DLIQT +FL+ AC FS+ AA+ N+TFLF+GT K  A LI  E++RCGAFYINHRWL
Sbjct:    1 MKKIELAHLLDAGVHLGHKANRWNPKMFPYIYTERNQVHIIDLIQTIKFLRLACTFSENAARNNETFLFIGTNKYTAPLITAESERCGAFYINHRWL 97
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig96535.17663.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A8F0JWX3_9PHAE1.660e-5992.78Ribosomal protein S2 n=1 Tax=Protohalopteris sp. T... [more]
D1GJH5_FUCVE2.500e-5991.7530S ribosomal protein S2, chloroplastic n=41 Tax=P... [more]
A0A141BSD4_9PHAE1.440e-5889.6930S ribosomal protein S2, chloroplastic n=12 Tax=S... [more]
A0A8F0K065_9PHAE4.360e-5890.72Ribosomal protein S2 n=1 Tax=Desmarestia aculeata ... [more]
A0A1I9LVT4_9PHAE1.920e-5687.6330S ribosomal protein S2, chloroplastic n=1 Tax=Pl... [more]
A0A8E5XRD1_9PHAE3.890e-5179.3830S ribosomal protein S2, chloroplastic n=1 Tax=Is... [more]
A0A7S6U9Z1_9STRA2.290e-5080.4130S ribosomal protein S2, chloroplastic n=1 Tax=Sc... [more]
A0A7T8JK39_9CRYP1.860e-4669.0730S ribosomal protein S2, chloroplastic n=1 Tax=Cr... [more]
RR2_GUITH4.970e-4571.2830S ribosomal protein S2, chloroplastic n=2 Tax=Gu... [more]
A0A2I4Q2U3_9PHAE6.290e-4572.1630S ribosomal protein S2, chloroplastic n=1 Tax=Di... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001865Ribosomal protein S2PRINTSPR00395RIBOSOMALS2coord: 37..46
score: 50.15
coord: 87..97
score: 27.61
coord: 6..24
score: 46.23
IPR001865Ribosomal protein S2PFAMPF00318Ribosomal_S2coord: 9..97
e-value: 1.5E-36
score: 125.6
IPR005706Ribosomal protein S2, bacteria/mitochondria/plastidTIGRFAMTIGR01011TIGR01011coord: 4..97
e-value: 7.3E-37
score: 124.7
IPR005706Ribosomal protein S2, bacteria/mitochondria/plastidPANTHERPTHR1253430S RIBOSOMAL PROTEIN S2 PROKARYOTIC AND ORGANELLARcoord: 3..97
NoneNo IPR availableGENE3D3.40.50.10490coord: 1..97
e-value: 4.2E-38
score: 132.3
NoneNo IPR availablePANTHERPTHR12534:SF028S RIBOSOMAL PROTEIN S2, MITOCHONDRIALcoord: 3..97
IPR018130Ribosomal protein S2, conserved sitePROSITEPS00962RIBOSOMAL_S2_1coord: 6..17
IPR023591Ribosomal protein S2, flavodoxin-like domain superfamilySUPERFAMILY52313Ribosomal protein S2coord: 6..97

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig96535contigS-dermatodea_contig96535:3..293 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig96535.17663.1mRNA_S-dermatodea_contig96535.17663.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig96535 3..293 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig96535.17663.1 ID=prot_S-dermatodea_contig96535.17663.1|Name=mRNA_S-dermatodea_contig96535.17663.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=97bp
MAKIELAQLLEAGVHFGHKAQRWNPKMFPYIYAERNGVHILDLIQTTEFL
KRACDFSKKAAQKNQTFLFVGTKKQAAFLIAKEAQRCGAFYINHRWL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001865Ribosomal_S2
IPR005706Ribosomal_S2_bac/mit/plastid
IPR018130Ribosomal_S2_CS
IPR023591Ribosomal_S2_flav_dom_sf