prot_S-dermatodea_contig9601.17620.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig9601.17620.1
Unique Nameprot_S-dermatodea_contig9601.17620.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length120
Homology
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BLAST of mRNA_S-dermatodea_contig9601.17620.1 vs. uniprot
Match: A0A6H5K688_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K688_9PHAE)

HSP 1 Score: 151 bits (382), Expect = 3.850e-40
Identity = 76/118 (64.41%), Postives = 99/118 (83.90%), Query Frame = 0 
Query:    1 DLEALARSSREANEARQAVARWETALSRCKEMWKQLHGVQLLPLANGKAGTFGTSLAIGGGQRFIVATRRQQGLMRQVNGRFVHLKATRRLSKFFERDEFLQMMGIVRFSPAILAENL 118
            D EA+ARS  EA+ AR A+ +W++A+ +CK +WK+L GV LLPLANG AG+F T+ A+ G +RF+V TRRQQGL+ ++  RFVHLKATRRL++FFERD+FL+MMGIVRFSPA+LAENL
Sbjct: 2981 DAEAVARS--EAHAARLALGQWQSAMDKCKVVWKELQGVPLLPLANGTAGSFPTTFALAGRKRFVVGTRRQQGLLPKLTNRFVHLKATRRLARFFERDDFLEMMGIVRFSPALLAENL 3096
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BLAST of mRNA_S-dermatodea_contig9601.17620.1 vs. uniprot
Match: D8LJG4_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJG4_ECTSI)

HSP 1 Score: 148 bits (374), Expect = 4.560e-39
Identity = 75/118 (63.56%), Postives = 98/118 (83.05%), Query Frame = 0 
Query:    1 DLEALARSSREANEARQAVARWETALSRCKEMWKQLHGVQLLPLANGKAGTFGTSLAIGGGQRFIVATRRQQGLMRQVNGRFVHLKATRRLSKFFERDEFLQMMGIVRFSPAILAENL 118
            D EA+ARS  EA+ AR A+ +W++A+ +CK +WK+L GV LLPLANG AG+F T+ A+ G +RF+V TRRQQGL+ ++  RFVHLKATRRL++FFERD+FL+MMGIVRFSP +LAENL
Sbjct: 1022 DAEAVARS--EAHAARFALGQWQSAMDKCKVVWKELQGVPLLPLANGTAGSFPTAFALAGRKRFVVGTRRQQGLLPKLADRFVHLKATRRLARFFERDDFLEMMGIVRFSPTLLAENL 1137
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig9601.17620.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K688_9PHAE3.850e-4064.41Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LJG4_ECTSI4.560e-3963.56RING-type domain-containing protein n=1 Tax=Ectoca... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 5..25

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig9601contigS-dermatodea_contig9601:1448..2561 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig9601.17620.1mRNA_S-dermatodea_contig9601.17620.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig9601 1448..2562 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig9601.17620.1 ID=prot_S-dermatodea_contig9601.17620.1|Name=mRNA_S-dermatodea_contig9601.17620.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=120bp
DLEALARSSREANEARQAVARWETALSRCKEMWKQLHGVQLLPLANGKAG
TFGTSLAIGGGQRFIVATRRQQGLMRQVNGRFVHLKATRRLSKFFERDEF
LQMMGIVRFSPAILAENLHL
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