prot_S-dermatodea_contig9601.17620.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_S-dermatodea_contig9601.17620.1
Unique Name	prot_S-dermatodea_contig9601.17620.1
Type	polypeptide
Organism	Saccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length	120

Homology

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BLAST of mRNA_S-dermatodea_contig9601.17620.1 vs. uniprot
Match: A0A6H5K688_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K688_9PHAE)

HSP 1 Score: 151 bits (382), Expect = 3.850e-40
Identity = 76/118 (64.41%), Postives = 99/118 (83.90%), Query Frame = 0

Query:    1 DLEALARSSREANEARQAVARWETALSRCKEMWKQLHGVQLLPLANGKAGTFGTSLAIGGGQRFIVATRRQQGLMRQVNGRFVHLKATRRLSKFFERDEFLQMMGIVRFSPAILAENL 118
            D EA+ARS  EA+ AR A+ +W++A+ +CK +WK+L GV LLPLANG AG+F T+ A+ G +RF+V TRRQQGL+ ++  RFVHLKATRRL++FFERD+FL+MMGIVRFSPA+LAENL
Sbjct: 2981 DAEAVARS--EAHAARLALGQWQSAMDKCKVVWKELQGVPLLPLANGTAGSFPTTFALAGRKRFVVGTRRQQGLLPKLTNRFVHLKATRRLARFFERDDFLEMMGIVRFSPALLAENL 3096

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BLAST of mRNA_S-dermatodea_contig9601.17620.1 vs. uniprot
Match: D8LJG4_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJG4_ECTSI)

HSP 1 Score: 148 bits (374), Expect = 4.560e-39
Identity = 75/118 (63.56%), Postives = 98/118 (83.05%), Query Frame = 0

Query:    1 DLEALARSSREANEARQAVARWETALSRCKEMWKQLHGVQLLPLANGKAGTFGTSLAIGGGQRFIVATRRQQGLMRQVNGRFVHLKATRRLSKFFERDEFLQMMGIVRFSPAILAENL 118
            D EA+ARS  EA+ AR A+ +W++A+ +CK +WK+L GV LLPLANG AG+F T+ A+ G +RF+V TRRQQGL+ ++  RFVHLKATRRL++FFERD+FL+MMGIVRFSP +LAENL
Sbjct: 1022 DAEAVARS--EAHAARFALGQWQSAMDKCKVVWKELQGVPLLPLANGTAGSFPTAFALAGRKRFVVGTRRQQGLLPKLADRFVHLKATRRLARFFERDDFLEMMGIVRFSPTLLAENL 1137

The following BLAST results are available for this feature:

BLAST of mRNA_S-dermatodea_contig9601.17620.1 vs. uniprot

BLAST of mRNA_S-dermatodea_contig9601.17620.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A6H5K688_9PHAE	3.850e-40	64.41	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D8LJG4_ECTSI	4.560e-39	63.56	RING-type domain-containing protein n=1 Tax=Ectoca...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 5..25

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
S-dermatodea_contig9601	contig	S-dermatodea_contig9601:1448..2561 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_S-dermatodea_contig9601.17620.1	mRNA_S-dermatodea_contig9601.17620.1	Saccorhiza dermatodea SderLu1190fm monoicous	mRNA	S-dermatodea_contig9601 1448..2562 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_S-dermatodea_contig9601.17620.1 ID=prot_S-dermatodea_contig9601.17620.1|Name=mRNA_S-dermatodea_contig9601.17620.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=120bp
DLEALARSSREANEARQAVARWETALSRCKEMWKQLHGVQLLPLANGKAG
TFGTSLAIGGGQRFIVATRRQQGLMRQVNGRFVHLKATRRLSKFFERDEF
LQMMGIVRFSPAILAENLHL