prot_S-dermatodea_contig959.17608.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig959.17608.1
Unique Nameprot_S-dermatodea_contig959.17608.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length104
Homology
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BLAST of mRNA_S-dermatodea_contig959.17608.1 vs. uniprot
Match: D8LLQ9_ECTSI (PH domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLQ9_ECTSI)

HSP 1 Score: 133 bits (334), Expect = 5.660e-34
Identity = 68/78 (87.18%), Postives = 71/78 (91.03%), Query Frame = 0 
Query:   26 MRIRKTHNIPVVHELVKTPSGEESPAALAGVPPTAVLVGVAGEPTLRLGYEEAIGRISGRGRPITLAFRELHAAIDAG 103
            MRIRKTH+IPVVHELVKTPSGEESPAALAGVPP AVL+ VAGE TLRL YEE IGRIS RGRPITLAFR+LHAAID G
Sbjct:    1 MRIRKTHDIPVVHELVKTPSGEESPAALAGVPPAAVLIAVAGEHTLRLRYEECIGRISARGRPITLAFRQLHAAIDRG 78
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig959.17608.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LLQ9_ECTSI5.660e-3487.18PH domain-containing protein n=1 Tax=Ectocarpus si... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036034PDZ superfamilySUPERFAMILY50156PDZ domain-likecoord: 20..93

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig959contigS-dermatodea_contig959:11809..19954 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig959.17608.1mRNA_S-dermatodea_contig959.17608.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig959 11779..19954 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig959.17608.1 ID=prot_S-dermatodea_contig959.17608.1|Name=mRNA_S-dermatodea_contig959.17608.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=104bp
MTTAVSDANPFFQEFEATFESHSVGMRIRKTHNIPVVHELVKTPSGEESP
AALAGVPPTAVLVGVAGEPTLRLGYEEAIGRISGRGRPITLAFRELHAAI
DAGE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036034PDZ_sf