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Homology
BLAST of mRNA_S-dermatodea_contig959.17608.1 vs. uniprot
Match: D8LLQ9_ECTSI (PH domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLQ9_ECTSI) HSP 1 Score: 133 bits (334), Expect = 8.430e-34 Identity = 68/78 (87.18%), Postives = 71/78 (91.03%), Query Frame = 1
Query: 106 MRIRKTHNIPVVHELVKTPSGEESPAALAGVPPTAVLVGVAGEPTLRLGYEEAIGRISGRGRPITLAFRELHAAIDAG 339
MRIRKTH+IPVVHELVKTPSGEESPAALAGVPP AVL+ VAGE TLRL YEE IGRIS RGRPITLAFR+LHAAID G
Sbjct: 1 MRIRKTHDIPVVHELVKTPSGEESPAALAGVPPAAVLIAVAGEHTLRLRYEECIGRISARGRPITLAFRQLHAAIDRG 78
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 134.4 |
| Seed ortholog evalue | 3e-29 |
| Seed eggNOG ortholog | 2880.D8LLQ9 |
| EggNOG free text desc. | Domain present in PSD-95, Dlg, and ZO-1/2. |
| EggNOG OGs | 29GBP@1,2RPHW@2759 |
| COG Functional cat. | S |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| Hectar predicted targeting category | other localisation |
| Exons | 3 |
| Model size | 342 |
| Cds size | 312 |
| Stop | 0 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622925418.3817651-UTR-S-dermatodea_contig959:11778..11808 | 1622925418.3817651-UTR-S-dermatodea_contig959:11778..11808 | Saccorhiza dermatodea SderLu1190fm monoicous | UTR | S-dermatodea_contig959 11779..11808 + |
| 1694079920.3871043-UTR-S-dermatodea_contig959:11778..11808 | 1694079920.3871043-UTR-S-dermatodea_contig959:11778..11808 | Saccorhiza dermatodea SderLu1190fm monoicous | UTR | S-dermatodea_contig959 11779..11808 + |
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig959.17608.1 >prot_S-dermatodea_contig959.17608.1 ID=prot_S-dermatodea_contig959.17608.1|Name=mRNA_S-dermatodea_contig959.17608.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=104bp
MTTAVSDANPFFQEFEATFESHSVGMRIRKTHNIPVVHELVKTPSGEESP AALAGVPPTAVLVGVAGEPTLRLGYEEAIGRISGRGRPITLAFRELHAAI DAGE back to topmRNA from alignment at S-dermatodea_contig959:11779..19954+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_S-dermatodea_contig959.17608.1 ID=mRNA_S-dermatodea_contig959.17608.1|Name=mRNA_S-dermatodea_contig959.17608.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=8176bp|location=Sequence derived from alignment at S-dermatodea_contig959:11779..19954+ (Saccorhiza dermatodea SderLu1190fm monoicous) TGCCGGCTGCCGCACTGCCACCCAGGAGCGATGACTACTGCTGTCAGCGA
TGCCAACCCATTCTTCCAGGAGTTCGAGGTGCTGAAAAATAAATGTACCT
GGTATATACTGTATTACTTGTACAATGCATTGTAGTCGATGGTTGACCTT
TCGAAAGCTTGCTTGCGCCCCGGCCGGAAACAAGACGATGCTGCGCTGTA
GGTGCTGTGGGTGCGTGGCTATAGGTGTTGTGTGCACGGGGCATGGGCAG
CTGTTAGCTGCAGCGACGCACCGCCGTGAGGCTTGTTGTTTCCTGGGGTA
GAGAGTACGACTCCCCTGCCGAGAGTCTGGTTCGATCTAAAAAGTCTCAA
CACCAAGGCCCTGTTTTTTCAAATGAAGTCATCCATACATGTATGCATCA
GGGGCATATATACATATGTGTAATACACTGCTATACACGGAACCCTGCTC
CAAACGTCGTACAAGTCCTGATCAGTTTGATATGACATCAATCCTGAGGA
GTGCGAACGGCGATCTTGACGGTGTAAGTGCACAAAGAAGGTTTGGCCTT
GCACCTCCCCACCACCGCGGTCATGAACCTCCACCCCACGATTCAGAGAC
TCATTTAACTACTTGAGTGTAAGTACAACAGCAGATCTGAGATACAATCC
GGCCCGTGTCCAAAGTGAGATGCGATACGCTCCCTCTTTCTATATAAAAA
ACATAATCTAGTTACCTGTACCAGTACATCCCTAACTGACGGGCACACTC
CAGGGGCCACGTAGATGTATGCTATGGGGGGAGCCTGAGAGGAGCTATAT
ATATATGCGGTTGCCATAGTGTAGGAAGCTCTGGCAAACAAACGTTGACT
GTAAATTTTAAATTTTATGTGCATGCTGGCGCTGTCCGATGAGTGATGAA
CTGTATTTTCGCTCTTTTTTTTAACATAATCTAGTTTTTTTGTTTTTGCA
CTCTTTGTACAGCAGTATCATACACTTTATGTGTTCTGGTCTCTTCATGC
TTGTACAGTATTTATAAGTATCATAGGTTGACAGGACACACACAGCATAC
AGAGTATGTTACCACAAACTATGAATACAAGCATATTGGGCTCTCTACTG
CTGTAGAGCTACCAGTACTGCTGTTGTACTACTACTGCTTGTAGGTATCG
TGTAAGTATAATCCTTTTTTTTTGCCCCGAATATCGTCACTTGTAACGGG
GTTCTACCTCAACGCCTTCAGGGACGCGTGGATCATTAATGCTCGCATGT
GATGGGACTCAGTTCCTTGTTATTTACCAGCTCGTAGCCACGAGGCAAAA
GGTAGACCACAGCTAGGGTCAAGAAGAGAGAGGGAAAAGAGTGGGCCATC
CATGCAAGCGCCAAAGGACGCTTGCCCGATTGACCAGCAAATAACCCGTA
AGAACCTACCTACGAATATCCACCGGTATATCAACCCGCAGTGGGCTGTA
ATAACCCGATAACCCGATATATATGTCTACTACCAACTATCGACGCCATG
ATCCTTGATCTACGTAGAGACGACGTACGCTCCGAGAAACGCCTAATAAC
GCTAGCCGTCACCATTACACTAGCCCACCCTGATGATTCGTATATGCAGT
TTACTAAAACGAAGATACGGATCCTCAAACCAGCAAAATATTCAACCAAA
ACTCAAATCTGCTATCTAGATCTCCAACACAATCTTCAAACAAATCTACG
ATTTTGATCTAGATCTCACTCCCACACCTCGTATCATAAGGCATAGTTGC
CTGAAAACGATAGAAGAAAATCTCCGAAAAACCAATACATCTACAAACGA
AGTAAGGGTCTACTGCTGTATCGCAGTGACGGGTGGACGCATAGAGTTCA
CCGCCGCCGTGCATGAAGGGTAAGCTAAGCGTGGCATGCTGCTATCATCA
CTTTTACACCGCGGCTACTATATATAATATATACGCTATGTGTACGGGGA
CGAGTAGCCACCGTTCGGTCACGGTTCGATTGACTGATTGAGCGATTAAT
TGATTGATTTTCACACATATAACCGACCGGCCCACCGTTTTTGCAATTGC
GAAATTGGATGAGCTGGTCCCGCTCGTGGCCGCATGAAGGCACAAGAGAA
AGTGAAATCCAGCACCCCTACACACCCAACAAGAAACTGACGGCCAGACA
TGATAGAGATGATATAACCCGCACGCCGCCCGGAGCGCCTGACCCCCTGA
TTTACAGGAAAACTCTCCTTATAATGTGCTACGATACAAGCACGAGCTAC
AGGATTTATGTTTGACGTGCTTCCCATAGTTAACTTACCATATCACACAG
TAGGTAGGTAATGCCAAGCTACAGAAACTTACTATCTGAACTGCTGCTCG
CACCGCCATAGGACACAGAAATACAGCAGCATCCATCACCAGATGTCAAA
GCATATCCCACCACGACACGACAAGGCTGAGAACTACTGAAAATATACCA
AAGAGAGCATCCTCCCGACGGTCAGCCCGGGCCGCACCCCTTGCAGCATT
TCAACAAGATTATGCATCGCTTGCCAACGAAGAACACCCTCGGCAAAGGC
ACAAGCGTAAACAAACACAAGCCCGAATGCGCGGGCAGTAAGCCCGCCTC
TCTACACAACTTACTTTGTCACAAAATGTGCTTGCCAGGAAAAACTAAGA
AAAAAATCTCCGCCCCGTGCTCGGTGACGTCGACCTTGGTCTTGCTCGTT
GTCGCGCCAGCCAGATCCTATCGCTTGAGCATTGGTGCGCCAGCCACCCC
CTCGGCCCTCAGCCCCGCACCCCGGGTGTCCCCTTCGCAGCCCTTCGTAG
CCCTGTCAATATGTCCTCCAGTGCATGTTGTCCATGTCATGAAAACAAAG
TGCCCTTCTAAACCTGTGTGACTCCCGGTTCTTGCCATGGGTTTTCTCGC
GCGAGAGGGTTCAGCCATCCCACCTCGCTCGTCGGCGGTCGCACTCCATC
CTCACCGAATCCGCGCGCCCAAGACTGACGCGAGGACATTCTGCCAACTC
ACGACAAGCGCATCACCGTGAAACAAGCCCTCCATCTGATACACGTGCGC
TTTCGGCGACGATGTCACCTGCCTCCGCGTGCACCACATCACCCACGATA
CCTCCTCAGGCTNNNNNNNNNNGGTCGATCTAGATATCGTCCAGCATCAG
TGGTGAGAAGGCATCACCTCTCGAGGGCGAATCCAGCCCGACTTGCCAGA
AAGACCCCCCCCCGGCCAAAACCTCGAGGTCGAGGCAGGGCAGGAACGAG
GTCACGAGTCGATATGAAATACTTTTAGTAAAACTATACTACAGTGGTAC
TAATACTAACACTAATACCTCTAATACTAAAACTTTAACTGTACTAATAA
TAGTACTGATAATCATACTAATACTAATACTAATACTAATACTAATACTA
CTGTAATACTAATACTAACATAGTATTAGTATAGAGCATATAGTAGCCAC
CGTTCGGTCACGGTTCGATATGAAAACACGGTGCGGGCAAATGGCCCAAC
TCCGAAAACATGCTCAGCCCCAAGAGGGTTTACATACTGTACATACATGC
TATGGAACTTCCTGTATGTTTTCTTTGGTGTAGTACTCGTATGCGACCCT
TTTTGGGACTTGAGTCAGTCCGTTTAGCGACGATCATCCCGACTACAGGT
ACTGTACAGTATTAGTATTAGTAGTATATCGCGGTGACGGGTGCACTCCA
CTAGCGCACCGAGCATGCGAGCTGAGCGTGAGAAGGTCATCACTGTTTTC
CACCGCCACTACAGTACAGCGAGGAGTACTATTAGGGAGGTATACAGTAT
GATATCAGTAATCAGGACCAAATACTGTATCACGACCATGAATACAATAC
CCACCTATACTATTCCTATCATACCACGAATACCCAAATATCAACAGAAG
TAAGTGTCTCTTAATAGTGAAGAAAAACAACACGATATAGTGTCATATAC
AACAGCATCGACCATGAAATCTCGATAATTCCCGCATGTTTATATTTTTT
TAGGTTGAGAATTGGGGCAAATTTGGACCTGTTAACTATGGTCCTCCGTG
ATGCAGCAGTAGCAGTAGCCTCTTCTTCATCACGGTTCGATGTCAAATAC
CTGTACCATGTTGCCTTGCGCGGAGCCGAGGGGGCGTTAGCCCCCTCCGG
CGAAGCCCTTTTATCTCTCTCTCTATATATATATATATATTATACTTGTA
TGATACGGTGTGGGCAGATAGGCCGCTGTCAGTGAATGCTATACCTGTGA
CTCGGAAGAACTTGGATCAATCAAGCCATATTTTTTGCAGCATTAGCATT
CATTCACCTTTGTTTTGCTTTCTGAAATGTCCTCGTTTTTTTTTTTTCCG
GTCACGTCGTTCAGAGAAAAACTATATAGTTGAACTGACACATGATTTGA
CATACCGCTGTCGTTTCGCGCTCACTGGTACAAGCGAACCGAAAGGGGAA
TCATATGCTTCTCAAACGCGGTCGAGGCAGAAAATACAACTCGCGGAATT
CGAAACCGCTCACGGTATGTAACTATTAAATACCCCCCTTTGACGAGCCT
GGCCCGGTGAAAACCCGGCGTGCTCCGTCCCGGCTTTGTAGGGATGCGAG
GTCTATTGTCTAACGACTACGGCATGCACGATCAATGAGTACACCCTTTG
AGCCACGCGCGAAGGAGGGCAACGAGACAAGTTTTTTTTTTTTTTTTTTT
TCACAATCGAAACACAACACAGCAAGTGCACCAAACAGTCCGTAACTTAT
CGTCGGGACAAGATCCAGATGGATTTCGTTTACACAAAACTGAGACGAGG
GCACTCCAAAGATACGGGGGGGGGGGGTAAGGAAATCGTGTTTTGTCTTT
TGTGCAGGAGTTAGAAGGCGTTTTTCCATTTTCCTCTCCTCGTCGCGCTT
GATTGGACAGCCGATCTCAAATCCCGTCCCGAATTCACCAGGTTCAGCCC
ATACGTTCCGGTTTGCAACCGCATTAATAGTGTTATAGTGTGGCTCGCCG
GCCGACAACTCCCCCACTTAAAACACACGAAAATATTTATAAAACACAGA
GCGAACGTTTGGATCCAATATTTTGGTAGTGGAAAAGAGAAGAGATGGCC
CAAGCTACTCAGTGGAGGTCTACGCTATGTACGGTGTTGTGGGATTGTAT
ACATGTTACTCTCTGGGTAGGGGTTTGACACCCCCCCCCCCCTGAAGACA
GTAAGTGTTACCCCCCTTTCTTTGCATTGCTCACGATTTTCATCGGCCGC
CGGAAAAAAAACATCCTCGAAGTAGAACATGGTCCAGGCGACTAACCCCC
CAAGTGAATTGCTTGGCTCAGTGGGGGCTGCGCCGCCTTTTGTAATTGTT
CGACTTATCTCATGCATGGGGCGAAGTTGCGCCGCCGGTTTTTGCTCTTT
GGCGCCCTACCATTGGCTTACCGAGTGATTTGTGCTCCTGGGATTGGCTC
GCTGAGTGATTATGTGCCTCTTCGAGCATTTCACATTTCCCAGCACCAGC
GGGAAGAGGATGTACCCGCGATTGTTACGTGCAACTAATAGTAGTAAATG
AAGTGGTGGCCAGTGGAAAGCGCGACAGCGTGAGTACGCAAAATCCGAGA
AATTGGCGAGCTGCGGGAGTGCCGAACCCAATGCAGTCGCGATGAAAACA
CTAAGGTAAGAACCCGGGAGAGGTGGGATGATTGATCCCTTGTGACCACA
GACGGCCCTCAGGGAAAGCCGGTCTCTTGTCATAGTATGTGTGCAAAAAA
CAAAACAAGTATCCCATCCAGGTGCGATATCATGATACAGTATAATAGTA
CAATGGAAGGGGGGGTCGTGTCCTATTATAGAGGGTGAGAGATTTCGCTT
GGGCGACTCGCGAGATGAATCGCAAGTTCTTTGAGGTGTGGCGTCGTGGG
GCTTCTTTTTTTGTCGCAAAGCCGGACAACGCCGCACCAGATACACGTCG
GCGTTATTTGCAATCGCATTATGCTCTCTTTCGTGAAAGGAATCGTCGCG
CGGCTTGGTTTTTCGATCACCTCAAGAGCTACTGTACTGGGCGCGCGGTG
TCTTTATATGTTTTAGTTTCGCGGTTCGTCTTGCGAGTTGCTATATAGAG
CTTTTCACTATTTACTATAGTGGGTATGTCCAAGCGTGAGTTTGCGTGAG
ACCTTCCACAGCTGGGCATAAAATATTATATTTGAGAGGGTTTGCGATAA
AGTGAGATTCCATCACCAGATACAGCTCGTTCCCTGATCGCGAAGACGTG
CACCGCACCACATGCCTCGCGCTCGTGTTCACCGATGCTCCCGAGCACGT
CTTGGGGGCATGACACACACAGTAGTCACGTCTTGCGGCATACACGGTGG
TGAAGGCCGAGATATTTTGCTGTTATCACGCTGACCCTGACCGCCCTTTA
TACCTAGTGAAGGGGAAGTTTCCAGCGTAAGTTGTTTTTAGTGTTTTATT
TTTTAACACCCCCATTGAAAATTGCCCCCCAAAGCCCTTCTATGGGCAAA
AAAGTGCATCCCGCGCCTTCCATTCCGCTTCGCAAAACAACATTTAAACG
GGATCACCCCCCCCCAAACAGCACTAGCAGGTTAGACCTTAGACGGAGAT
CGCAACGCTGAGGAGAAATCGCAACGCGCGTGCATGTTTTGGCCACTTTG
CCGCGCGATTTTTAACGTTCGGTCTTGCGGGCCTGACCTTGGTCGTCTTC
CCTGCGGAAGGTCCTCATGCTATCGTCTAAAGAGACTTGATCCCGCACTC
CCGCGCCCACCCGGGGTACCGCACATTTGACAGGTTGCGGCAAGTCACAC
TGGCGCTCGTTTTACTGCGGTTGAAAGCCACTGCGACAGCTACCTTTCGG
CCCGGCTGCCGTCCCATCCTCAATGTTCGGCGTGGCGCAGCGATAGATAT
CGTCTATTCGCTGTGGTGGGTGCTGTGCGCATTGTGTGCGCCCCTTCCTC
GCCACGTGAGACGCTCTCTCAGTTGCGCGAACGGACATAAATACGCGTGT
GTTTGATATCTCTTTTGCAAAATAAAACAAAAAGAAACAGTAGAAAAAAC
AAACGCCTATAAATAATATGCAAAACAAAAACAAAAGGAACATGCTCTCA
AGAGCATCGTCATCATCGCGCCGGGCGCACGCCAGGCACCATGCATCACG
TCAAAGTGTCGAACAGTTGTACCAACACTTAATAGTGTCACATCGTCACG
TTTCTTTTCTTTCTTTCTCTCTCTCTCTCGCTCGCTCGCCCTCTCTGTGC
GGACTCGTTTCCTAAACGTTGGTTTGATTATTTCAAGGCCACGTTCGAGT
CTCACAGCGTAGGCATGCGCATCCGCAAGACTCACAACATTCCCGTGGTG
CACGAGCTAGTCAAAACGCCTTCAGGGGAGGAAAGCCCCGCCGCGCTCGC
AGGAGTTCCACCGACGGCCGTCCTAGTGGGTGTAGCGGGGGAGCCCACCC
TGAGGCTAGGGTATGAAGAGGCGATCGGAAGGTAAGCAGGTCACGTCCTA
TATATATATATATGTATATGTATTGATTTTGTTATAATTATGTAGTGACA
CCGCCTGCGCATGGTCGGTCTGTGATGCGGGAGGAGCAGGCGTACGTCTC
GAGGGCTGCGAGCGGTCCTTCGGCGAGAGAAAATATATTGGCTCTTGCAC
CACCGATCTGCGCTTTGTTTTTTTAATGAAGCGGGAAGGATCATGCGTGT
AAAACAGGTGGTAAATAATACTTGGGAGCAGCTAGCTCAAGCGAACGAAA
TGGGGATTTGGTCCACGTCGACGGCAGTGCTACTGTTGTAGCGGTAGGGG
AGTGCTCCCGGCGACCTATCTGGCCGGCTGTTGTGGCGTTTTGGATCATT
CCGTGTTGAGTGTGGAGTTTGGACAATATCGGGTCCCAGCGTCGGTTGTG
TGCGTGTTCGGTTGAGTCGATCCGAGACCCATATTTCTTATCCCGCTGTT
CCATGCACTCGTGTTTTGATTTCCCGCCACAGCGTCAATGCATCGCTTCT
TCACGGCGTAGCCCAGACGGCCCCATAGCCGACCGAGCGCAGCGCTCGTG
ATGGTGCGCGAATGACAGGCACGCTCCCGCGTCGTGTGTGCCCTTGTTCC
CCGCAGGATATCTGGAAGGGGACGCCCCATAACGCTGGCCTTTCGCGAGC
TGCACGCCGCGATAGACGCCGGGGAG back to topCoding sequence (CDS) from alignment at S-dermatodea_contig959:11779..19954+ >mRNA_S-dermatodea_contig959.17608.1 ID=mRNA_S-dermatodea_contig959.17608.1|Name=mRNA_S-dermatodea_contig959.17608.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=624bp|location=Sequence derived from alignment at S-dermatodea_contig959:11779..19954+ (Saccorhiza dermatodea SderLu1190fm monoicous) ATGACTACTGCTGTCAGCGATGCCAACCCATTCTTCCAGGAGTTCGAGAT GACTACTGCTGTCAGCGATGCCAACCCATTCTTCCAGGAGTTCGAGGCCA CGTTCGAGTCTCACAGCGTAGGCATGCGCATCCGCAAGACTCACAACATT CCCGTGGTGCACGAGCTAGTCAAAACGCCTTCAGGGGAGGAAAGCCCCGC CGCGCTCGCAGGAGTTCCACCGACGGCCGTCCTAGTGGGTGTAGCGGGGG AGCCCACCCTGAGGCTAGGGTATGAAGAGGCGATCGGAAGGCCACGTTCG AGTCTCACAGCGTAGGCATGCGCATCCGCAAGACTCACAACATTCCCGTG GTGCACGAGCTAGTCAAAACGCCTTCAGGGGAGGAAAGCCCCGCCGCGCT CGCAGGAGTTCCACCGACGGCCGTCCTAGTGGGTGTAGCGGGGGAGCCCA CCCTGAGGCTAGGGTATGAAGAGGCGATCGGAAGGATATCTGGAAGGGGA CGCCCCATAACGCTGGCCTTTCGCGAGCTGCACGCCGCGATAGACGCCGG GGAGGATATCTGGAAGGGGACGCCCCATAACGCTGGCCTTTCGCGAGCTG CACGCCGCGATAGACGCCGGGGAG back to top
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