|
|
Homology
BLAST of mRNA_S-dermatodea_contig956.17583.1 vs. uniprot
Match: D8LSM7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSM7_ECTSI) HSP 1 Score: 582 bits (1501), Expect = 9.610e-197 Identity = 308/417 (73.86%), Postives = 343/417 (82.25%), Query Frame = 2
Query: 203 QQRPTAPLFSFPPGPRVDRTKAEESLQEILPVQQRLVKYLTEDRVFGAQILCSVYFLMSAVAYAMDSQKFSGCYHAALTALTIKQWGTVIGRVRRVLVPHLIYEPQRYAKYRARVSALALDPAVQGIVYCGLFMFVPLGNALLPLLLKETVYLMWVIKEVLQIAAPALVETLTPLFEPALSVVMTAGDVGKWRDMPETEKRLLLGRRLAQMCFKLEMAMPFSVALRVLPGAIQSTLGAGAGEAGSE----AAGGVFGQIARALPMAKVLAMMLAYVKLLAVRNTQLEDDVRVLRGLKIRGYNCEWVEQAVDSVVFGKMVGCPWWTGLLASGFALLPNHEATKNVMASDQRLKTLGMTLLNLAIGRTPGAEDXXXXXXX--GSAKADGTSDGDDGEAFPPSRMAKIAKVAAVASGISD 1435
++RP APLFSFPPGPRV RT+AE+ LQE+LPVQQRLVKYLTEDRVFG QILCS+YF MSAVAY MDS KF G Y AAL LT+KQWGTV+GRVRRVLVPHLIYEPQRY KYRARVSALALDPAVQGIVYCG+FM +PL AL+PLLLKE+VYL+WV+KE LQI AP LVETLT L EP +SV MTAGD KWRD P EKRLLLGRRLAQ CFKLEM MPF VALRVLP +Q++LGAG G A E AA G GQ+ RALP+ KVL +++AYVKLL V+N QLEDDVR+L GLKIRGY+CEW+E+ VDSVVFG MVGCPWW GLLA F+LLPNHE TK VMASD +LKTLGMTLLN AIGRTPGA+D XXXXXX GS + DG+S SRMAKIAKVAAVA+G+SD
Sbjct: 251 RRRPVAPLFSFPPGPRVRRTEAEDGLQEVLPVQQRLVKYLTEDRVFGVQILCSIYFFMSAVAYLMDSTKFGGSYQAALAVLTLKQWGTVVGRVRRVLVPHLIYEPQRYVKYRARVSALALDPAVQGIVYCGIFMLMPLSLALIPLLLKESVYLLWVMKEALQITAPGLVETLTTLSEPLMSVFMTAGDSEKWRDTPAGEKRLLLGRRLAQACFKLEMVMPFGVALRVLPAVLQTSLGAGGGVADGEGAEGAAAGAGGQLGRALPLVKVLVLVMAYVKLLVVKNGQLEDDVRILSGLKIRGYDCEWIERGVDSVVFGMMVGCPWWAGLLAVAFSLLPNHEVTKKVMASDDKLKTLGMTLLNKAIGRTPGADDDXXXXXXXXGSGEKDGSSXXXXXXXXXXSRMAKIAKVAAVATGVSD 667
BLAST of mRNA_S-dermatodea_contig956.17583.1 vs. uniprot
Match: A0A6H5KS72_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KS72_9PHAE) HSP 1 Score: 250 bits (638), Expect = 1.160e-74 Identity = 134/192 (69.79%), Postives = 152/192 (79.17%), Query Frame = 2
Query: 521 RYAKYRARVSALALDPAVQGIVYCGLFMFVPLGNALLPLLLKETVYLMWVIKEVLQIAAPALVETLTPLFEPALSVVMTAGDVGKWRDMPETEKRLLLGRRLAQMCFKLEMAMPFSVALRVLPGAIQSTLGAGA----GEAGSEAAGGVFGQIARALPMAKVLAMMLAYVKLLAVRNTQLEDDVRVLRGLKI 1084
RY KYRARVSALALDPAVQGIVYCG+FM +PL AL+PLLLKE+VYL+WV+KE LQI AP LVETLT L EP +SV MTAGD KWRD P EKRLLLGRRLAQ CFKLEM MPF VALRVLP +Q++LGAG GE AA G GQ+ R LP+ KVL +++AYVKLL V+N QLEDDVR+L GLK+
Sbjct: 16 RYVKYRARVSALALDPAVQGIVYCGIFMLMPLSLALIPLLLKESVYLLWVMKEALQITAPGLVETLTTLSEPLMSVFMTAGDSEKWRDTPAGEKRLLLGRRLAQACFKLEMVMPFGVALRVLPAVLQASLGAGGSVADGEGAEGAAAGAGGQLGRVLPLVKVLVLVMAYVKLLVVKNGQLEDDVRILSGLKV 207
BLAST of mRNA_S-dermatodea_contig956.17583.1 vs. uniprot
Match: A0A835YJH6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJH6_9STRA) HSP 1 Score: 199 bits (506), Expect = 1.140e-49 Identity = 128/316 (40.51%), Postives = 175/316 (55.38%), Query Frame = 2
Query: 260 TKAEESLQEILPVQQRLVKYLTEDRVFGAQILCSVYFLMSAVAYAMDSQKFSGC-----YHAALTALTIKQWGTVIGRVRRVLVPHLIYEPQRYAKYRARVSALALDPAVQGIVYCGLFMF--VPLGNALLPLLLKETVYLMWVIKEVLQIAAPALVETLTPLFEPALSVVMTAGDVGKWRDMPETEKRLLLGRRLAQMCFKLEMAMPFSVALRVLPGAIQSTLGAGAGEAGSEAAGGVFGQIARALPMAKVLAMMLAYVKLLAVRNTQLEDDVRVLRGLKIRGYNCEWVEQAVDSVVFGKMVGCPWWTGLLASGF 1186
T AE L LP+QQRL+KY T+D++F QI S+YF +A A+ S + Y AL AL IK W V+GR+RR LVP L EP ++ +RAR ALA DPAVQ ++C L + PL AL PL L+E YL V +EV+ IAAP + L L +V++ GDV WR M E + + +GRR++Q CFKLE+A + LR P A+++ ++A A A + AY +LL+VR+ QL DVRVL GLK+ G W+E VDS ++ +M+G P WT L + F
Sbjct: 30 TAAEAGLDGFLPLQQRLIKYFTDDKLFTVQIAGSLYFAANAAILALSSAPDASAARARAYQGALLALIIKYWCVVLGRMRRTLVPGLAREPGKFGLFRARARALARDPAVQTSLFCALALTRQPPLSAALAPLALREGAYLFLVAREVVSIAAPRALPALGALVRWPAAVLVAKGDVRAWRAMGEGAQLVEVGRRVSQACFKLEVAALGAALLRDYPRAMKAD-----------------NKLAAAAAFALYIG---AYAQLLSVRHAQLGGDVRVLSGLKLGGVGLGWLELVVDSALYARMLGLPRWTAFLMAVF 325
BLAST of mRNA_S-dermatodea_contig956.17583.1 vs. uniprot
Match: A0A836CE38_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CE38_9STRA) HSP 1 Score: 127 bits (320), Expect = 4.240e-27 Identity = 116/367 (31.61%), Postives = 166/367 (45.23%), Query Frame = 2
Query: 188 SSESLQQRPTAPLFSFPPGPRVDRTKAEESLQEILPVQQRLVKYLTEDRVFGAQILCSVYFLMSAV-------AYAMDSQKFSGCYHAALTALTIKQWGTVIGRVRRVLVPHLIYEP------QRYAKYRARVSALALDPAVQGIVYCGLFMFVPLGNA----------------LLPLLLKETVYLMWVIKEVLQIAAP--ALVETLTPLFEPALSVVMTAGDVGKWRDMPETEKRLLLGRRLAQMCFKLEMAMPFSVALRVLPGAIQSTLGAGAGEAGSEAAGGVFGQIARALPMAKVLAMMLAYVKLLAVRNTQLEDDVRVLRG-LKIRGYNCEWVEQAVDSVVFGKMVGCPWWTGLLASGFAL 1192
+S S ++ PLF+ P P T AE L+ LP+QQRLV+Y T+DR F Q S++F A A AMD + Y +AL + K + RVRRV +P L+ + YA++RAR +ALA DPA Q +VYC L LG + PL++ E +L AP AL + L + ++ ++ GDV W++M E E R +GRR+AQ KLE+A+ V LRV P A+ + +IA A + Y++ VR+ QL D RVL G + G +E +DS + +G P W G + FAL
Sbjct: 103 TSTSSSEKLAPPLFNAPLRPGRAHTVAEAGLEGFLPLQQRLVRYFTDDRAFALQAAGSLWFAAHAALTLAAPSAAAMDPLRM---YRSALAGVAAKNAALLAQRVRRVALPPLLAAEAPGGGARAYARFRARAAALARDPAAQALVYCALM--ATLGGSGXXXXXXXXXXXXXXXXXPLVVNEGAWLXXXXXXXXXXXAPPRALRAAASRLAQWPMAALVARGDVKAWQEMGEAEWRAAVGRRVAQASLKLEVAVMALVLLRVYPRAMTAP-----------------NKIASIASFALFASTFARYLR---VRSAQLGGDTRVLGGGAALCGVPLAPLELLLDSAAYAAPLGLPRWAG---AAFAL 441
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 8 |
| Model size | 2304 |
| Cds size | 1068 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig956.17583.1 >prot_S-dermatodea_contig956.17583.1 ID=prot_S-dermatodea_contig956.17583.1|Name=mRNA_S-dermatodea_contig956.17583.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=356bp
MSAVAYAMDSQKFSGCYHAALTALTIKQWGTVIGRVRRVLVPHLIYEPQR
YAKYRARVSALALDPAVQGIVYCGLFMFVPLGNALLPLLLKETVYLMWVI
KEVLQIAAPALVETLTPLFEPALSVVMTAGDVGKWRDMPETEKRLLLGRR
LAQMCFKLEMAMPFSVALRVLPGAIQSTLGAGAGEAGSEAAGGVFGQIAR
ALPMAKVLAMMLAYVKLLAVRNTQLEDDVRVLRGLKIRGYNCEWVEQAVD
SVVFGKMVGCPWWTGLLASGFALLPNHEATKNVMASDQRLKTLGMTLLNL
AIGRTPGAEDDDDDEEEGSAKADGTSDGDDGEAFPPSRMAKIAKVAAVAS
GISDF* back to topmRNA from alignment at S-dermatodea_contig956:9797..21283- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_S-dermatodea_contig956.17583.1 ID=mRNA_S-dermatodea_contig956.17583.1|Name=mRNA_S-dermatodea_contig956.17583.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=11487bp|location=Sequence derived from alignment at S-dermatodea_contig956:9797..21283- (Saccorhiza dermatodea SderLu1190fm monoicous)
GGCCTCCGACGAAGCGAGCGAGCCAACGCTAGATGTCGACGCAGATTCGG
CGGAGAGCAGCGACGGCGGCGACTATGGTTCGGAGGAGGCCGAAACGAGG
GAGGAAGAAGACGGGACGGAAGGAACGGAAGAAGGGGGCGACGACGAATC
TCCAGGCGACGAGGGGGAAAGCGGGGAGGTTGCTGGTTCTTCGGAGAGCT
TGCAGCAGCGCCCCACGGCCCCGCTGTTTTCGTTCCCGCCGGGACCGCGG
GTGGACAGGACCAAGGCGGAGGAGAGCCTCCAGGTGAGGAACTGTTTAAA
AGTCGCACGGCGGTTGTCGTTGGTGCTCTGGTGGGGCGGCGGCGTCCCCC
ATGGTGCACGTGCGTGACTGATCTTGCTGTGCTCTTTGGCGAGGCCATGG
GATGCCATGAGATTTAATTTTTGTTGCTCTTGGCCCAAGCGTGCTCGGGA
GTTTTGCTGTCGCCACGTCGCCCTCGGTGTGTTGCGGGATACCGGGATTG
GCGTCCGCTCCGTAACGACGGCCTTCGACAACCGTTGCAGTGGGGGCCGC
GCGTCGTTTGTGCACGTGCTGTGCAATACGGCTGCTGTCAACGCGTTCAT
GCTCTTGTTTGTGTGTATAGCATGTTTTTGATGGGTGCACGCCTGGCCAG
CAGCAGGCCTGTATACAAAATTCTTGGTTCTATCGAAAAGTTGTGCCACT
AGGGGGCGGGCGGGGGTGCTGACATCACAGGGTACAGCGCCCCTTTGGTC
GCTAGCGGTCGGTCGCCTTGTCGTCGGCAAGAGTTTGGTACGGAGGCCGT
TCGAGTCTCGAGTGTCGCTTGCAACTGCGGGGGCTGCGGCATGCAACATG
ACAATGTGTGTGGTATTTCATGCATACATCGTGCAAGTCACCTTTTAGGA
ACGAGTGGCTTGGGAAATAATGGTATTTGGTGATGGTGGCTGCGAAAGCG
TGGACGTTGCTCGGTACCCCCGATGACAGTAGTAGGACACCTAACGCAGT
GGGAGGACGTACTGGAGGCGATCGGCTTGGCTTGTATGCGAAGGGGTGTG
CACACAGCCTGTGCCTGAGGCGTCGTCACTCGGACGCAACGCGTTAATGA
TGTACCCCACTTTGATACCCGCTCCGCACCTCCTGCAAACACTGAACAGG
AAATTCTACCGGTGCAGCAACGGCTGGTGAAGTATCTGACCGAGGACAGG
GTGTTCGGCGCGCAGATTTTGTGCTCCGTGTACTTCCTCATGAGCGCGGT
GAGCGATAAAGAAGGACGAGCGAAGATATTAAAAAGAAGGAGTTCAGTTT
TTTTTTACAGCTCGGTCGTGCTTCGTTTTTTGTTATCGTGTACTGTCACA
ACGCGGTAGAGTTTCGTTACTTCCTTCCGGGTAGTGATGACGTCCGAGAG
AAAAGAGTGCATTGTTTTGTGGGCAAGGGGGGCAAAGGTAACCTGCTTGA
GGCTCATGCTGCGCCTGCCGCAATTGAGGTTGACACGGTATGCGTACGGT
GGGGATATCATACTTGCACGGCGTTCGGTGTGCAAGGGCCAGACAAGCAT
GCGCCCGGATTCCCAAGAGACGCGAGCAGCACCTTTATGGAAAATATTTT
AAAAGCTTGTCATAGGAATGGCGGTGCATGTATGATACAGCAGTACTCGT
ACCCACCAAGACTGCACAAACACACGCGTACCCTTTTCTCCCGTCGTCTA
ATTTTATCACAGGTCGCGTACGCGATGGACAGCCAAAAGTTCAGCGGGTG
CTACCACGCCGCGCTCACGGCCTTGACCATCAAGCAGTGGGGCACCGTGA
TTGGAAGGGTGCGGAGGGTGCTGGTGCCTCATCTTATATACGAACCCCAG
AGGTGCGCCGCTTTTTGTTTCAAGGGGGGGCGAGGTCCTGCCCGTTCTAC
AAGCATTTCGAAGTTTTCTGTCGAGTCGGGGTTAGGGTTGGTACATCGGG
GGGGGCTGTAATTACGGGGCAGCAAGCCACCGCCCTGTGCTTCGGTGTTG
CTAGAGTGTCAGCAGCGAATACCGCGTGGTCTGTGTGCGGCGCGCTACAA
GGCATGAGCTCGTGCTTCTGCAGTTGTATTTGGTTTTCGAGCTGTCCTTG
GGGTTTGAGTGTCCTGCTGGCTAGCTTTCGGCGAGGAGCACGGCGTTCAC
GCGCTGGGTGCGACGAGCCATAATTTCCTCCTATTGCGATTCGTGCCCCT
TGCGTCCACCCTCCATAGGGCATGGATAGGCATGAAAACTTTGCAAAGTG
TAAAGAGAGTGAGTGAGTCCTATTATATTGTTGTATCCTTTCCGGGTTTT
TGTCGGTGTATGGTGTACTCATTGATCGTGCATGCCGTAGTCGTGAGACC
ATACCCCTCGCATCCCTACCAAGCCGGGACGGAGCACGCCGGGTTTTCGC
CGGACCAGGCTTGTCGGTGCATGGGGGTGGATAGGTGACCACCCAGGTGT
AATCATCGGTGCATTGAAGTGCATTTCGCACGAGGCAAAGAAGCGTCTTC
GCCCCTCCCACCCTCTCGCCAGCCCGCGCCCAAACCATTCAGCTGTGATG
TTCGTCCCTTACCCCTCCTCCCCTCGTTGTAGCAGGTATGCCAAGTACCG
GGCCAGGGTGTCGGCGCTGGCGCTCGACCCGGCCGTGCAGGGAATCGTGT
ACTGCGGTCTATTCATGTTCGTGCCCCTGGGCAACGCACTCTTGCCCCTG
CTGCTTAAGGAGACGGTGTACCTGATGTGGGTCATCAAGGAGGTCCTGCA
GATCGCTGCTCCAGGTCAGGAGGGGCGGGGGTATAGGGTTGGTGTAGGGG
GGTCGGCGGGGAGACAGGGAGTGAGGGGGGGGGGGTCACTTGTGCTCCTG
GGGAAATTGTGTCCGTGAGAGCTGCGGAGCATTTGTTTTGCCGGCGGTTA
GCGTCCGATGAACGCGCCGAAATAGGTATTTCGTTCCCGGAGGGTTTGGA
TAGCTCTGAGGTTTATTTTTTCCGAGTTGCAGGTCACACACACACACTAC
GGCTTTCAGTTTTCAGCCCCTTTGGTCTCTCCTGTTGCTCTTGTTTAGCC
CGTGCCGGTGTGTTCCCAAACAGAGTGGAAATTAAAATTCTGGTTCGCGA
CGATTTGCCCTTATTTCCTGTCCGCGCGTACGATTGCCACCACTGATGGG
CAGCCCTTGTGGAGACCCTCACTCCTCTGTTCGAGCCAGCCCTGAGCGTG
GTGATGACAGCCGGGGACGTGGGCAAGTGGAGGGACATGCCGGAGACGGA
GAAGCGCCTCTTGTTGGGCAGGCGCTTGGCTCAGGTACTAACATGAGTTG
GGCAGGGTGGTGTGCCCAGCTCGTGTGCGTCAAAGCGTCATCACACTCCC
GTGTAGATTTAGCCGTACACAGCGGCGGGAATTGTCGATTGTCTGTGCTG
TCTCTTTTGCTTGCGTCAAGTGAGACTGAATCCAAGTACCTATTATAGTG
CTTTTTGGTTGAGATGCACGAGCGGGAACCCACGGCCGCGACAGAAGGTG
GCGGTGTGCGGTCCTGCTTAGCGTCGCGTGTGGTCCGGGCGGATCGTTCG
AAGAAATAGGCCTAGCTCGCGGGAGGCAGTGATCTATCCGTTTCGAACTT
TGGAGAAATACATTTTTTGTAGTTTTTTCTTGCCAAAGATTTCGAGTACA
GAAACCCCTGGCTGGTACTGGTGAGAGCTTGTTTCATAGCTTGTTTCATA
GCGTTCTGGTGCTGCTCAAATATGTTCCCACAGCAGCCTCGTTTCACCTT
TCAAGACACCCGATAATTGCTCTCGGATCTATGTAACGCCTTTTGTGGCC
TGCGAATCCCCGCCGAAAAACCCATGCATTCAATCGAATGATGCTCACTG
GCGTGTGTTATTTCCCTCTTGAGAGCGTGAAGGAATCCCAGCATCCCAGC
CCCCGTTCCACAGGGTTATCGTACGTGTAACTGGGAAAAAATCGCGGTAA
GCTGATCCATGGAACACTCCCCCCTACCTCTGCGCCCGCGCCTCGCCGAA
ATGTAGATGTGCTTCAAGCTAGAGATGGCAATGCCGTTCAGCGTCGCCCT
CCGCGTTCTCCCGGGCGCCATCCAAAGCACCCTCGGGGCAGGGGCGGGGG
AAGCCGGGAGCGAGGCGGCGGGAGGAGTTTTCGGGCAGATCGCTCGGGCG
CTACCGATGGCGAAGGTCCTGGCGATGATGCTGGCCTACGTGAAGCTTCT
CGCGGTTAGAAACACCCAGCTGGAGGACGACGTGCGCGTGCTGAGGGGCT
TGAAGGTGCGTTAAGGGCCTTGCGCTGGTGGTGGTGGGCGCTGTGGTGGT
GGTGATGCTGTGTGATGCTGTGTCGCTGTGCTGTCGTTCGGATTGTGTTT
CTTTGGGCACGTGCCGGTGGGACAAATGGTTCAAGCGGGGAGCTCGATTG
TGACACCAAATAATACGGTACAGTATTATTCCAACTGGCCCATCGAGGTG
GGCAGGCGCGCACATGCTCGGCTTATTGCGGCGGGGGGTAAATGGTCATC
AGGATCAATTTTCTGCTCAAATGTATCATAGCGTATTGAAGTCTTGTTTT
TAAACATTTGCCCGAAAACTTTGAACCTTGTTAAGAAGTTTTTTGTTTTT
TTGTTTGACGTTTCAGGCCGGAAGATTGCAGGTGTTGTAAGGTCCATATT
ATGTTGGGTTATATTGTTTCGTACAGGTGGTCCTGATTCCTCTGTACCTC
CGTAACAATCGTTTTTGGTGTACAAGTACCCTTCCGCAATTGTTCCGCGC
CGTTTGGATGGTCTACCCGACTGAAGAGCAAAAAACTGCCACTTTCGCTT
GGTTGGCTTGCAAACATTGTGCGCGGAGATAATCCCAGCCAGCGCCGTTT
GGTTGGTCTACCCGACTGAAGAGCAAAAAACTGCCACTTTTGCTTGGTTG
GCTTGCAAATATTAATATTGTGCGCGGAGATAATCCCAGCCAGCCAGCCC
GTGCGCTCGACCGGCCGCGGTTCGGATGTCGTACGGTCGCCTCGTCGGCG
GATACATTCGTTACGCCGACTCACACCGCCACACGGGCTTATTAATCGTC
CCGCGACACAACCAAGATGGTCTTTGGCACTTAGTAGCTGTGGTTCGTAG
CATGACGAAACGCAGTACCCCGCTACCCGGCTGCAAGCGCGCGCCACGTA
CCGCTCAAGCCCAAAAGGCGTACCTGGCGGTGCTTTCCCGATGCACACCC
GCGCCGGCAGCGCGCGACGTGGAGGAAACGAGGAGACTTTTGGAGGGGTC
CTCCGCTTTTTTGTACTTGCTGAAAATCCTACCTTTTTTTGTTGAGAGGG
GAGCTTTGTTGTTGCTCTTGCGGACGTCGCGCGCATAGTCAGCGTTCGAT
GTCGTTTTTACGGGCCAGTCAAGTCAAAGGTGCTGCACCAGCAGAGACGT
AACGACCTCCAGAGTAGTCCGTGGTCTGAGGTTACACCGCGCGGCGGGCT
TGCCGACAAGCTTGTCGGGTTGTGTTTATTGGCCTGCCGGGTAGACTAGA
GCAGCCCTGCCGTAAGCCGGGGTAGCATCGGAAACTCACGCAGTTCCCCA
CGCGCGGTTAACCTGTCTACACAGCCCGGGTAGCGCGCCTATTGCGGAGG
TACACAGAGTAGTCAGGACCAAATGTGCAAACTGTAAGTATACCCAACAT
AACATACCATACTTGAACACAGCAGTAATGGTAGTATAATAGTAATAGTA
GTATAATAGTAATAGCAGTGTTATACCCAACATATAATAGTATACCATAA
ATCAATCTGGTCTGGCCTTATTATATACTATTAATAGTATACGGCATCTG
CTATCTTCCGGCCTGAAATGTGAAATCAAATGAAACCTAACCTTGTTCTT
ACAAGGCGTTCGGGCCAACGTGTGAAAAATAAGTTTGAATACGATATTGA
GCAGAGACTAGTAGGTAGCCACGGCTACTCCCGTGAGTTGTCCGTTGGCA
GGACGGTGTGTGGGTTTGGAGGCCATGGTGACTGTATTACCCACGGCAGG
CGTTCACCCACGGAGGAAGCCGAGCTGTGGGCCTCACCCTTCTGGCTGCT
GTGGGCCTCAAACTCGTGTGGAGTTTAGTGTACCAAATCGCCTAAAACAA
TCGGCCTCAAAATCGTATAGGAAAGGTCACTCTACATCGGTATAAAAAAA
CGTCCGAAGCGCTATTAATTAATAAAGATTTTATCCTGATTACTACAGTT
AGTGTACATCCGGAATAGAAGCATGTGGCGTACATAGTTTATGCAGTTGT
GAATATCTGCTAAACTCAACCACCATCCACGCGCTACACCCTCCGACGGT
GTGTGCACGTCGTTTGCCCCTCATTCCGAGCCAGATCCGCGGCTACAACT
GTGAGTGGGTGGAACAAGCGGTGGACAGCGTGGTATTCGGGAAGATGGTG
GGCTGTCCGTGGTGGACGGGGCTGCTGGCGTCTGGGTTCGCGCTGCTGCC
GAACCACGAGGCCACGAAGAACGTCATGGCTAGCGACCAGAGGCTAAAGG
TGAGGTCTTGCTTTTTTTTTGTGCTCTCTTCGGAGAACAGGTTGATGCAC
AGCAGTGCGCAAACCCGTGTCATTGGAATGGAACCCCTTGGCCTATCGTT
TTATATATATATGTACCAGTACAAGGGCTTCACCGGAGGCTTCGGCTCCG
CGCAAGGCAATCGAAGATAGCGTGTTCGACGTTGAGGTTCGGTATCCAAG
GCGCGAAAATGTGCGTCCTTCAAAGCAATCTTCATCATAATATAGTAATG
CTACAAAGCTGTATAGCTACAAGTATGGCACTAGGGGGAAACGTGACGAC
ACTATAATAATATGTGTTACACCTCTAGACTATTATGATGCGTGTAAAAG
TATGCAGACATACTTGACTCCATGGTACACTTGCTACTTGTACTGTATTT
GAAGCTGTCAGTCTGTAGAGCATGTTTATTCGCACACTCACTACTACTGT
ACTACAGCCGTGCAGGCATCACCCTGACTGTCATCATCAAATCATAAGTT
TTTACTCTCACTTCATGCGGGGAGGAGTGTGGGGTGTCACAGCAGCTGTA
CTCACCTCACCAGTAGTAAAAAACTTCGCTACGACGCAAATCTCAATCTT
CCATGAATTACCAAGTAATACTATCAAGAGCCAGCCAGTCTTTGACAAAT
ATTTACAGCCAGCCAGCTGTGTAATTATTATTTGCTAAACGGGAAAAACA
AATTTCGCAAAAAAACAAAAGCCGACCACACCCATCCACAAAAAATATAT
CAAGTTTGGCCTTGAATAAGGACCACCACCGGGGCGTTCGGAGGGCGCCA
CGCACAGTTCAACCCTTGCACGCCTAAGCTCAGGACACAGCAGGATGGCC
TGCTCTTGGTTCGAAGGCCCTATCTCCTGTACGTGCTCCGCGAGCCGAAA
CAAACTTCGTTGTACGCAGAGATCCAAAGTGTCAAGAAACTGCTGCATCA
TACATATGATGCTACTACATGTGACGCTTAACAAAGAAGTGGATTTTATA
GGGCAAACAATTTGTAAACCATCGGGCAGGTAGGAACTGCCCCTGTGGTT
CAATGGCTAAAGGCACATGACGTAAATGAATCTGGAACATGAGTTCGAGT
CCCACGCAGGTCCCATGATGTTTTTTTTCGTGTTATACTTTTTTTTTATT
GTTTCTGTGGCGGTTTGGAATAATCTCACCTGTCGGTTCAACCGTCAATT
GGCAAGTCACGCCCCCCTGCTTGTGGGTTGACCATGGTTTCGTCTCGGGG
CATTTGGCCAACATATTTGTCTATCCGGGATGATCGATATTGACTTGAAG
TTAGCATCAAAAATGGTCACAAAATGTCACAAAAATTCCCACCACTACTG
TTGTAGTGCCGATCGCCCCGTTGGCCTCGGCCGGCAATTTTTCTCTGGCT
GGCGTTGTTGTTGGTGGTGGGCAACATAAATTAAATATCCCCCCTGTTGT
TATGTAGGATGTATGATACAGCAGCAGTAGGATAGGTATCATTCGTTTTC
ATTATCGTTTCTTGCCGAACCGACTGTGGACGGCTGCGTTCAGGGCGCGT
TGGAGACAACCACACACGCAGTGACGCCTCCACGGCCAACCGCTGGACAT
GACAGGAGGCATCTGTGTCCTTTTCGCATCTCCCGTTGCAATAGGTCGCT
TCCACGACGTGCAAACGACACACACACGCGCGGTGGTCGAGAGTGCAAAA
ATAAAACATAAAAAAATCAATTTGCTGCTGTGCTCCAGATTGTTTTCCAC
ATCACGCCACACACCACACACAACAGCTGCAGCAGGACAGAGCTCGGATA
TCGCAGGATTCCGAAATACTGCGTGTTCCGAGCCCTCAGGATCGAACTAA
AGACTTGCGAAAAAATCCTTTCTAGGCGACAAGAGCCTACTCAAGGCTAG
CTTCGAGTAAGTTCTATTTGTATTTTCAATTGCCACAGCACGGAGGCCTG
CGAGTGTTCCGAAACCCCGAGGCTAAATAAATATTATAGATAGGTTTATA
CAAACGCCACAAAGACCCACACCATTGTGCCAAGCTAAATTTAATTTTTG
TTTTTAGGAAGATCGCGGGGCTCGCAGCAGCACAGCGGATATGCTGTTGC
GTACAAGTATTATTGTTGATGATGTCTTAGGACCACGGCCCTCACAGCAA
TAAGACAGCCGGGTTGCTGTGCCTCGCACTGATAAAGTGTGCTGTTAGCA
GCATGCGCTGACAGCCTAACGTGTTTGATCAACTTGGCAGCGACCGTTCC
TCAGAAATGGGGGCGTATCACGCTCAGATTTGTATCACAGGATCACGGAT
CACACAACTTGCATACATGAAGTATCAGTATATACGTACGAATCATATCA
TAGGACCACCACCACACCACGCCCAGACATGTGCAGCAGCTCTTTTGTGT
GCGAAGAATGGGAACACTCCTTCACTCCCTTCACCCCTGTATCTTGCTAG
GGCCGGGGGGGGGGGTGGTGCTGTTAGGAGGACAGGCGGGAGGAGGTTAT
TTTGTGTTGAGGGGCAGCGTGTAATCGGTGTGTCGGGTCGAAGTCGGGGA
AAATAAATAATAGTTACCCGATGCTACGTGCGTGGTGTTGTTGTAATTAA
ATAGACGGCACAAACATACATACAAGCAAGAATCGCGTTTTTGTATAGCC
GTTTTTTTTCAATCAGGCCGACTCTTATCGCAACAGAATACGAAAACGAA
AATGGACGATTTTCGATATTTATTTTCGATCACAGAAAATCCAAGAATCG
CTGTCTTATCGGCTCCGTTTTGTTTTGTATTTGAATCATCAGCTGTACTG
CTGTAATTGCCAACGTTTTTTTTCCTCTCTGTGCCAGACAGAGAGAGACA
CCACAGAACAGCAGCCCCTTGGCAGGGCGAGACAGAGCAAGCGGCCGCGG
GCGACACGGCGATGCACCATGACTGGCGCGTCTCGTCCACGCACGTGTGT
CTCCAGCAGTGTACTCTGCTGTGTCGGCAGTGTTGTTTGCGGGATGCATG
TACATACATGATGGATACTTTTGTCACTGTACACGCGTGTGAGATTGGGA
GCGGAAAGAGACTGCTCGGCTCCACGGCTGCACTCTGCAGTCTTCGCACA
CGAACAGCAGTCTTGGCGCGGCAGGGGTGGCTTTGTCCAGGCGCCACGCC
CGTGCGAATACGCCGTCCGAGGCCTGGCGCTGTCTGTGTGGGCCTGTCTG
TGTGGGCCTGTCTGCTGTCCTACCCGTGTTACAAGACTCCTACTATGATG
TGAAAATACCCATACAACGATGACAAAAGCAAAGCCTCGCGCCGAAGATG
GCCTTACGCCTCCGAATACCTTAGTGCATCGAAAACGGATATCCATTTTC
GATATGGAGGGCAATCGAAAACGCGATATCGAGAATTGCTCCTCGAAAAT
GGGCCATTTCGGATTCGATAAGAAGGAAGATCGAAACTGAAAATCGAAAA
TCGTCCATTTTCGATATCGTTTTCTGTTGGTTTAAGAGTCGGCCTCAGGA
TGGGGGAAACCCAATGTTCTAACGAACACTGGTTACGTGTCAAGCCGGTT
TGCGCGGTTTAATGCAAGTAAATGAAAAGGGAATAGCAGAATCATGACTG
ACGGTTCGCCGGGGAACGTTCTTCTGAGCCAAGTATTGCACTTGGGGAGT
CGCCTGGACCATTTTCTACTCAGCATATTTTGTTTCGGGCGGCCGTGAAA
TCATCTCAGTTTTGTGTACAAACAGGCCACCCGGGTCCTGTCGTGTCCCG
ATCAGTTATGGATTGTACAAGTACGTTTTCTGTTGTCTGTCTATAAAAAG
TATTTTTTGGTTTTAACAAAAATCTATGCGCCGCCTCCAACTTCCAGCAC
GTACATCATACGCTCTCACACTCCGCAACCTTCTCGCCCCGGCTTCTTGC
TCCGCACGGCACGGCACCGCGCGCAACAGACCCTGGGTATGACGTTACTT
AACCTTGCTATCGGCCGCACGCCTGGTGCTGAAGACGACGATGATGACGA
GGAGGAGGGGAGTGCTAAGGCGGACGGCACCAGCGACGGGGATGACGGGG
AAGCGTTCCCTCCCAGCAGAATGGCCAAGATCGCCAAGGTCGCCGCGGTT
GCATCGGGGATTTCAGACTTTTGATTGAATGCTTGGCGTTGCCGCCCGCC
CCGCCCTTGAATGTTTGCTTTTGTTTTTGTTTTTTTTTGTTTTTTTCTTT
CGCCCTCCCCCCCCCTCTTGTTTTCGTGTCTGAACGGTGCTCATCTGTCT
ATCATACTACAGTTGTGTTGCGTTTTTTTTTCGGGATTCCTGCTGAATTT
TGGGCGACTCGGTATTTTGCGCATCGCGCTGGCCAAAATGTGCCGTACAA
TAGACTTTTGAAACATTTTCGGACGATACCACCACCGTGTTTACCGGATA
AGGGCACGCGCCCTCGCGTCAGGGTTACTCGTCACAATTCCAAACATGCG
TGTGCCATGTTCACATTTTTTATTTTTGCAATTCACGGTATGACATACTT
TGGAATTGCGTGGGCAACCAACCGATTGCAATGCTGTTAACAATTTGATG
GACTCACCCTTTTTTACGGAAACGCGGAGGATTCTGATCGGAATGTGGGT
TTCGGATGTTCGGTAAAGTACTATGGATTTTTCTGGTGGTCTGTCGACTG
CATGATGGATTTGGAATTATCGCGGCGATGACCACGCCTGCATTCCTTTA
GTCAGCGTTGTGTACGTACTCTGTAGCAACTTGTGATTGCTAATATAACC
AACGTTATACCTGCTGGGGGAAACAGCACAGCAGGGTGGACTGCACCAGT
TCACCTCGGTGTCCGTGCTGGTTGATGCGTCCTAATACATAGTCGTGATA
GAGTGTTGGAGCTGTTGCACAACGGCGCGCTCGTTAGTTTTGTCACTGGT
AAATCACCCGGCAGAGGGCAGGTGCTCCTACGGCCGAGCGCGGGGTTGGG
GTGGGTTGGATTGTTTGGGCTGTTCGTGGTGTCATCG back to topCoding sequence (CDS) from alignment at S-dermatodea_contig956:9797..21283- >mRNA_S-dermatodea_contig956.17583.1 ID=mRNA_S-dermatodea_contig956.17583.1|Name=mRNA_S-dermatodea_contig956.17583.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=2136bp|location=Sequence derived from alignment at S-dermatodea_contig956:9797..21283- (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGAGCGCGATGAGCGCGGTCGCGTACGCGATGGACAGCCAAAAGTTCAG
CGGGTGCTACCACGCCGCGCTCACGGCCTTGACCATCAAGCAGTGGGGCA
CCGTGATTGGAAGGGTGCGGAGGGTGCTGGTGCCTCATCTTATATACGAA
CCCCAGAGGTCGCGTACGCGATGGACAGCCAAAAGTTCAGCGGGTGCTAC
CACGCCGCGCTCACGGCCTTGACCATCAAGCAGTGGGGCACCGTGATTGG
AAGGGTGCGGAGGGTGCTGGTGCCTCATCTTATATACGAACCCCAGAGGT
ATGCCAAGTACCGGGCCAGGGTGTCGGCGCTGGCGCTCGACCCGGCCGTG
CAGGGAATCGTGTACTGCGGTCTATTCATGTTCGTGCCCCTGGGCAACGC
ACTCTTGCCCCTGCTGCTTAAGGAGACGGTGTACCTGATGTGGGTCATCA
AGGAGGTCCTGCAGATCGCTGCTCCAGGTATGCCAAGTACCGGGCCAGGG
TGTCGGCGCTGGCGCTCGACCCGGCCGTGCAGGGAATCGTGTACTGCGGT
CTATTCATGTTCGTGCCCCTGGGCAACGCACTCTTGCCCCTGCTGCTTAA
GGAGACGGTGTACCTGATGTGGGTCATCAAGGAGGTCCTGCAGATCGCTG
CTCCAGCCCTTGTGGAGACCCTCACTCCTCTGTTCGAGCCAGCCCTGAGC
GTGGTGATGACAGCCGGGGACGTGGGCAAGTGGAGGGACATGCCGGAGAC
GGAGAAGCGCCTCTTGTTGGGCAGGCGCTTGGCTCAGCCCTTGTGGAGAC
CCTCACTCCTCTGTTCGAGCCAGCCCTGAGCGTGGTGATGACAGCCGGGG
ACGTGGGCAAGTGGAGGGACATGCCGGAGACGGAGAAGCGCCTCTTGTTG
GGCAGGCGCTTGGCTCAGATGTGCTTCAAGCTAGAGATGGCAATGCCGTT
CAGCGTCGCCCTCCGCGTTCTCCCGGGCGCCATCCAAAGCACCCTCGGGG
CAGGGGCGGGGGAAGCCGGGAGCGAGGCGGCGGGAGGAGTTTTCGGGCAG
ATCGCTCGGGCGCTACCGATGGCGAAGGTCCTGGCGATGATGCTGGCCTA
CGTGAAGCTTCTCGCGGTTAGAAACACCCAGCTGGAGGACGACGTGCGCG
TGCTGAGGGGCTTGAAGATGTGCTTCAAGCTAGAGATGGCAATGCCGTTC
AGCGTCGCCCTCCGCGTTCTCCCGGGCGCCATCCAAAGCACCCTCGGGGC
AGGGGCGGGGGAAGCCGGGAGCGAGGCGGCGGGAGGAGTTTTCGGGCAGA
TCGCTCGGGCGCTACCGATGGCGAAGGTCCTGGCGATGATGCTGGCCTAC
GTGAAGCTTCTCGCGGTTAGAAACACCCAGCTGGAGGACGACGTGCGCGT
GCTGAGGGGCTTGAAGATCCGCGGCTACAACTGTGAGTGGGTGGAACAAG
CGGTGGACAGCGTGGTATTCGGGAAGATGGTGGGCTGTCCGTGGTGGACG
GGGCTGCTGGCGTCTGGGTTCGCGCTGCTGCCGAACCACGAGGCCACGAA
GAACGTCATGGCTAGCGACCAGAGGCTAAAGATCCGCGGCTACAACTGTG
AGTGGGTGGAACAAGCGGTGGACAGCGTGGTATTCGGGAAGATGGTGGGC
TGTCCGTGGTGGACGGGGCTGCTGGCGTCTGGGTTCGCGCTGCTGCCGAA
CCACGAGGCCACGAAGAACGTCATGGCTAGCGACCAGAGGCTAAAGACCC
TGGGTATGACGTTACTTAACCTTGCTATCGGCCGCACGCCTGGTGCTGAA
GACGACGATGATGACGAGGAGGAGGGGAGTGCTAAGGCGGACGGCACCAG
CGACGGGGATGACGGGGAAGCGTTCCCTCCCAGCAGAATGGCCAAGATCG
CCAAGGTCGCCGCGGTTGCATCGGGGATTTCAGACTTTTGAACCCTGGGT
ATGACGTTACTTAACCTTGCTATCGGCCGCACGCCTGGTGCTGAAGACGA
CGATGATGACGAGGAGGAGGGGAGTGCTAAGGCGGACGGCACCAGCGACG
GGGATGACGGGGAAGCGTTCCCTCCCAGCAGAATGGCCAAGATCGCCAAG
GTCGCCGCGGTTGCATCGGGGATTTCAGACTTTTGA back to top
|