prot_S-dermatodea_contig956.17583.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig956.17583.1
Unique Nameprot_S-dermatodea_contig956.17583.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length356
Homology
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BLAST of mRNA_S-dermatodea_contig956.17583.1 vs. uniprot
Match: D8LSM7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSM7_ECTSI)

HSP 1 Score: 484 bits (1246), Expect = 1.250e-164
Identity = 262/360 (72.78%), Postives = 291/360 (80.83%), Query Frame = 0 
Query:    1 MSAVAYAMDSQKFSGCYHAALTALTIKQWGTVIGRVRRVLVPHLIYEPQRYAKYRARVSALALDPAVQGIVYCGLFMFVPLGNALLPLLLKETVYLMWVIKEVLQIAAPALVETLTPLFEPALSVVMTAGDVGKWRDMPETEKRLLLGRRLAQMCFKLEMAMPFSVALRVLPGAIQSTLGAGAGEAGSE----AAGGVFGQIARALPMAKVLAMMLAYVKLLAVRNTQLEDDVRVLRGLKIRGYNCEWVEQAVDSVVFGKMVGCPWWTGLLASGFALLPNHEATKNVMASDQRLKTLGMTLLNLAIGRTPGAEDXXXXXXX--GSAKADGTSDGDDGEAFPPSRMAKIAKVAAVASGISD 354
            MSAVAY MDS KF G Y AAL  LT+KQWGTV+GRVRRVLVPHLIYEPQRY KYRARVSALALDPAVQGIVYCG+FM +PL  AL+PLLLKE+VYL+WV+KE LQI AP LVETLT L EP +SV MTAGD  KWRD P  EKRLLLGRRLAQ CFKLEM MPF VALRVLP  +Q++LGAG G A  E    AA G  GQ+ RALP+ KVL +++AYVKLL V+N QLEDDVR+L GLKIRGY+CEW+E+ VDSVVFG MVGCPWW GLLA  F+LLPNHE TK VMASD +LKTLGMTLLN AIGRTPGA+D XXXXXX  GS + DG+S          SRMAKIAKVAAVA+G+SD
Sbjct:  308 MSAVAYLMDSTKFGGSYQAALAVLTLKQWGTVVGRVRRVLVPHLIYEPQRYVKYRARVSALALDPAVQGIVYCGIFMLMPLSLALIPLLLKESVYLLWVMKEALQITAPGLVETLTTLSEPLMSVFMTAGDSEKWRDTPAGEKRLLLGRRLAQACFKLEMVMPFGVALRVLPAVLQTSLGAGGGVADGEGAEGAAAGAGGQLGRALPLVKVLVLVMAYVKLLVVKNGQLEDDVRILSGLKIRGYDCEWIERGVDSVVFGMMVGCPWWAGLLAVAFSLLPNHEVTKKVMASDDKLKTLGMTLLNKAIGRTPGADDDXXXXXXXXGSGEKDGSSXXXXXXXXXXSRMAKIAKVAAVATGVSD 667
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BLAST of mRNA_S-dermatodea_contig956.17583.1 vs. uniprot
Match: A0A6H5KS72_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KS72_9PHAE)

HSP 1 Score: 250 bits (638), Expect = 3.570e-79
Identity = 134/192 (69.79%), Postives = 152/192 (79.17%), Query Frame = 0 
Query:   50 RYAKYRARVSALALDPAVQGIVYCGLFMFVPLGNALLPLLLKETVYLMWVIKEVLQIAAPALVETLTPLFEPALSVVMTAGDVGKWRDMPETEKRLLLGRRLAQMCFKLEMAMPFSVALRVLPGAIQSTLGAGA----GEAGSEAAGGVFGQIARALPMAKVLAMMLAYVKLLAVRNTQLEDDVRVLRGLKI 237
            RY KYRARVSALALDPAVQGIVYCG+FM +PL  AL+PLLLKE+VYL+WV+KE LQI AP LVETLT L EP +SV MTAGD  KWRD P  EKRLLLGRRLAQ CFKLEM MPF VALRVLP  +Q++LGAG     GE    AA G  GQ+ R LP+ KVL +++AYVKLL V+N QLEDDVR+L GLK+
Sbjct:   16 RYVKYRARVSALALDPAVQGIVYCGIFMLMPLSLALIPLLLKESVYLLWVMKEALQITAPGLVETLTTLSEPLMSVFMTAGDSEKWRDTPAGEKRLLLGRRLAQACFKLEMVMPFGVALRVLPAVLQASLGAGGSVADGEGAEGAAAGAGGQLGRVLPLVKVLVLVMAYVKLLVVKNGQLEDDVRILSGLKV 207
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig956.17583.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LSM7_ECTSI1.250e-16472.78Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KS72_9PHAE3.570e-7969.79Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 69..90
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..68
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 91..355
NoneNo IPR availableTMHMMTMhelixcoord: 59..81

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig956contigS-dermatodea_contig956:10660..20044 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig956.17583.1mRNA_S-dermatodea_contig956.17583.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig956 9797..21283 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig956.17583.1 ID=prot_S-dermatodea_contig956.17583.1|Name=mRNA_S-dermatodea_contig956.17583.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=356bp
MSAVAYAMDSQKFSGCYHAALTALTIKQWGTVIGRVRRVLVPHLIYEPQR
YAKYRARVSALALDPAVQGIVYCGLFMFVPLGNALLPLLLKETVYLMWVI
KEVLQIAAPALVETLTPLFEPALSVVMTAGDVGKWRDMPETEKRLLLGRR
LAQMCFKLEMAMPFSVALRVLPGAIQSTLGAGAGEAGSEAAGGVFGQIAR
ALPMAKVLAMMLAYVKLLAVRNTQLEDDVRVLRGLKIRGYNCEWVEQAVD
SVVFGKMVGCPWWTGLLASGFALLPNHEATKNVMASDQRLKTLGMTLLNL
AIGRTPGAEDDDDDEEEGSAKADGTSDGDDGEAFPPSRMAKIAKVAAVAS
GISDF*
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