mRNA_S-dermatodea_contig9517.17543.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig9517.17543.1 vs. uniprot
Match: A0A7S4F1F4_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4F1F4_CHRCT) HSP 1 Score: 90.9 bits (224), Expect = 2.420e-19 Identity = 39/80 (48.75%), Postives = 62/80 (77.50%), Query Frame = 2
Query: 11 NDKQLIEVLCCRTKTQLERLDQSFRAQYEKTLWEKVKGDVGGNYKKILRYALMERDEFVSNIIDEACSGFGTDESLLIDV 250
NDK+LI VLC RTKTQL++ +++ Y+K L + VKG+ GG+Y +++ YA+ RD +++++ID+AC GFG DES+L+D+
Sbjct: 110 NDKKLIAVLCSRTKTQLQKTIKAYFQLYDKDLRKVVKGETGGDYGRMMYYAMSSRDSYIADVIDQACGGFGCDESMLVDL 189
BLAST of mRNA_S-dermatodea_contig9517.17543.1 vs. uniprot
Match: A0A0M0J561_9EUKA (Annexin n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0J561_9EUKA) HSP 1 Score: 85.5 bits (210), Expect = 1.890e-17 Identity = 40/90 (44.44%), Postives = 64/90 (71.11%), Query Frame = 2
Query: 2 LGTNDKQLIEVLCCRTKTQLERLDQSFRAQYEKTLWEKVKGDVGGNYKKILRYALMERDEFVSNIIDEACSGFGTDESLLID--VSCRKR 265
LG N +LI +C RTK+QL + +RA+Y+K + E+VKG+ GGNY +++ YAL R E+V ++ID+AC G+GT E +LI+ ++C ++
Sbjct: 110 LGCNHNKLIAAVCTRTKSQLSTTAKRYRAKYDKDIREEVKGETGGNYGRMMYYALGSRTEYVIDMIDKACEGWGTAEMILIELFITCEQQ 199
BLAST of mRNA_S-dermatodea_contig9517.17543.1 vs. uniprot
Match: A0A7S0LFJ1_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LFJ1_9EUKA) HSP 1 Score: 81.6 bits (200), Expect = 4.020e-17 Identity = 36/80 (45.00%), Postives = 60/80 (75.00%), Query Frame = 2
Query: 11 NDKQLIEVLCCRTKTQLERLDQSFRAQYEKTLWEKVKGDVGGNYKKILRYALMERDEFVSNIIDEACSGFGTDESLLIDV 250
ND +L VLC RTK+QL+R +++ +Y+K L + VKG+ GG+Y +++ +A+ R+ +V+++ID AC+GFG DES L+D+
Sbjct: 49 NDDKLRVVLCTRTKSQLQRTIKAYFQEYDKDLRKVVKGETGGDYGRMMYFAMSSRESYVADVIDYACAGFGCDESALVDL 128
BLAST of mRNA_S-dermatodea_contig9517.17543.1 vs. uniprot
Match: A0A7S0IXQ1_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0IXQ1_9EUKA) HSP 1 Score: 80.9 bits (198), Expect = 7.940e-16 Identity = 37/80 (46.25%), Postives = 58/80 (72.50%), Query Frame = 2
Query: 11 NDKQLIEVLCCRTKTQLERLDQSFRAQYEKTLWEKVKGDVGGNYKKILRYALMERDEFVSNIIDEACSGFGTDESLLIDV 250
NDK+LI VLC RTK+QL+R +S+ Y+ L + VKG+ GG+Y +++ YA+ R+ +VS++ID +CSG G +E L+D+
Sbjct: 110 NDKKLIAVLCSRTKSQLQRTVKSYFQLYDADLRKVVKGETGGDYGRMMFYAMSSRESYVSDVIDVSCSGIGCNEQALVDL 189
BLAST of mRNA_S-dermatodea_contig9517.17543.1 vs. uniprot
Match: A0A7S2BC38_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2BC38_9EUKA) HSP 1 Score: 79.3 bits (194), Expect = 2.710e-15 Identity = 35/82 (42.68%), Postives = 59/82 (71.95%), Query Frame = 2
Query: 5 GTNDKQLIEVLCCRTKTQLERLDQSFRAQYEKTLWEKVKGDVGGNYKKILRYALMERDEFVSNIIDEACSGFGTDESLLIDV 250
GT++ +LI VLC RTK+QL+R+ + +R Y+K + ++VKG+ GGNY K++ YA+ + E+V +++D AC GF + LI++
Sbjct: 39 GTDNNKLITVLCSRTKSQLQRVAKRYREMYDKDIRDEVKGETGGNYGKMMYYAMSSKTEYVIDMLDFACGGFFNNYMALIEL 120
BLAST of mRNA_S-dermatodea_contig9517.17543.1 vs. uniprot
Match: A0A852KS82_UROIN (Annexin (Fragment) n=2 Tax=Neognathae TaxID=8825 RepID=A0A852KS82_UROIN) HSP 1 Score: 72.8 bits (177), Expect = 7.880e-14 Identity = 35/86 (40.70%), Postives = 58/86 (67.44%), Query Frame = 2
Query: 5 GTNDKQLIEVLCCRTKTQLERLDQSFRAQYEKTLWEKVKGDVGGNYKKILRYALMERDEFVSNIIDEACSGFGTDESLLIDVSCRK 262
GT++K++IEVL RT Q +++ Q ++A Y+K L E +KGD+ GN++K++ L E+ + + +A G GTDESLLI++ C +
Sbjct: 18 GTDEKKIIEVLSSRTSEQRQQIKQKYKALYDKDLEEVLKGDLSGNFEKVVLALLDLPCEYEARELQKAMKGAGTDESLLIEILCTR 103
BLAST of mRNA_S-dermatodea_contig9517.17543.1 vs. uniprot
Match: D8LG01_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG01_ECTSI) HSP 1 Score: 73.2 bits (178), Expect = 3.970e-13 Identity = 32/81 (39.51%), Postives = 56/81 (69.14%), Query Frame = 2
Query: 2 LGTNDKQLIEVLCCRTKTQLERLDQSFRAQYEKTLWEKVKGDVGGNYKKILRYALMERDEFVSNIIDEACSGFGTDESLLI 244
+GTN+ ++I ++C RTK+Q+ER+D+ +R Y TL E+++ D+ G+ K + Y ME EF + ++ +A +G GTDE ++I
Sbjct: 302 MGTNEGRVIGIICTRTKSQVERIDEMYRTMYGMTLREQLEKDLSGDLKTFMVYTQMETQEFDALLMKKAMAGIGTDEDIMI 382
BLAST of mRNA_S-dermatodea_contig9517.17543.1 vs. uniprot
Match: A0A7S3FEM8_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3FEM8_9EUKA) HSP 1 Score: 70.5 bits (171), Expect = 2.670e-12 Identity = 36/83 (43.37%), Postives = 52/83 (62.65%), Query Frame = 2
Query: 2 LGTNDKQLIEVLCCRTKTQLERLDQSFRAQYEKTLWEKVKGDVGGNYKKILRYALMERDEFVSNIIDEACSGFGTDESLLIDV 250
LG NDK+LI V C RTK QLER +R Y+ +L + V + GG++ K+L+YAL D + +++ID A G G E LI++
Sbjct: 55 LGCNDKKLIAVTCSRTKAQLERTAAKYRELYDLSLRDDVISETGGDFGKLLKYALAPPDLYFADMIDWATEGMGCSELALIEL 137
BLAST of mRNA_S-dermatodea_contig9517.17543.1 vs. uniprot
Match: A0A835YQ69_9STRA (Annexin n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQ69_9STRA) HSP 1 Score: 65.1 bits (157), Expect = 2.820e-10 Identity = 32/72 (44.44%), Postives = 47/72 (65.28%), Query Frame = 2
Query: 2 LGTNDKQLIEVLCCRTKTQLERLDQSFRAQYEKTLWEKVKGDVGGNYKKILRYALMERDEFVSNIIDEACSG 217
LGT++ +L+EVLC RTK QL+ L + AQY KTL + V GDV G + K++ YAL + D++ + + A G
Sbjct: 54 LGTDESRLVEVLCNRTKAQLDLLSAASVAQYGKTLRQVVSGDVSGGFGKMMVYALQDVDDYGAQVFTNATKG 125
BLAST of mRNA_S-dermatodea_contig9517.17543.1 vs. uniprot
Match: UPI001D08FB74 (annexin B10 isoform X2 n=1 Tax=Coccinella septempunctata TaxID=41139 RepID=UPI001D08FB74) HSP 1 Score: 64.7 bits (156), Expect = 2.920e-10 Identity = 31/87 (35.63%), Postives = 54/87 (62.07%), Query Frame = 2
Query: 2 LGTNDKQLIEVLCCRTKTQLERLDQSFRAQYEKTLWEKVKGDVGGNYKKILRYALMERDEFVSNIIDEACSGFGTDESLLIDVSCRK 262
LGT++ +IE+L R+ Q + + + F+ E+ L E VKG++GGN++K++ LM E++ + A +G GT+E LI++ C K
Sbjct: 34 LGTDEDMIIEILTHRSNQQRQAIAEHFKNVLERDLIEDVKGELGGNFEKVIVALLMPPHEYLCKELKNAMNGAGTNEGTLIEIICSK 120 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig9517.17543.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig9517.17543.1 >prot_S-dermatodea_contig9517.17543.1 ID=prot_S-dermatodea_contig9517.17543.1|Name=mRNA_S-dermatodea_contig9517.17543.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=92bp LGHQRQAAHRGTVLQDKDPAGEARPVLSRAVREDSLGKGEGRCRRELQKNback to top mRNA from alignment at S-dermatodea_contig9517:7319..8265+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig9517.17543.1 ID=mRNA_S-dermatodea_contig9517.17543.1|Name=mRNA_S-dermatodea_contig9517.17543.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=947bp|location=Sequence derived from alignment at S-dermatodea_contig9517:7319..8265+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig9517:7319..8265+ >mRNA_S-dermatodea_contig9517.17543.1 ID=mRNA_S-dermatodea_contig9517.17543.1|Name=mRNA_S-dermatodea_contig9517.17543.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=552bp|location=Sequence derived from alignment at S-dermatodea_contig9517:7319..8265+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |