mRNA_S-dermatodea_contig9512.17542.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig9512.17542.1 vs. uniprot
Match: A0A6H5L145_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L145_9PHAE) HSP 1 Score: 468 bits (1204), Expect = 3.860e-158 Identity = 270/438 (61.64%), Postives = 312/438 (71.23%), Query Frame = 2
Query: 170 SQDLFEDWNREINPQFTAHTYDLLTHNCNNYTDEASKFLLGKGIPSYIIDLPNEVLSSPMGGMLRPVLEQMTTQMNGADPYSALHH---------------------GNPDASHPALGAAVGGGSFPVAAVAPAQPAGGGVAGARSAGSQNVGFPILDKHTKPLVGSDTAKAAPSVAARLKALGAGVDGLLSEAEGAVLDALPASLAAPKTSPVTPGSFRLVQKIVRQGSGWPDKAPFLALVLMSLMVLHMAEGEEMGDAMAGVLTRVQASGD----LSAQSLSIAICTAANAFGTPGGGKYMMRADVMPGWLDASLSGLQHERSEVRQMSSALMNNIALLL----ASDLPDGGEGQGLSDETAQILFGALEGLEDETSQMVALRRLLSAGRLVRKLGSTGTCLVNDVGLPDQVEIFLSKAPEGEAKGAAAEVLRLLG 1396
+Q+LFED+NRE+ P+FTA TYDL+ HNCN Y++EAS+FLLGKGIP YI++LP EVL+SPMGGMLRP++EQMTTQMNGADPYSALHH A P Q + GFPILDKHTKPLVGSDTAKAAP V AR+KALGA V LLSE E AVLDALP S+AA KT+PV PG FRL+QKI+ + SGWP+KA FLALVLMSLMVLH AEG EM +AM V RVQ +G+ LSAQ+LS+A+C+AAN F T GG +YM RADVMPGWLD+SL+GLQHER EVRQM SAL+NN +L+L AS GG +SDET QILFGAL+GL+DETSQ+VALRR+LS GRLVR GS L+NDVGL DQVE FLSKA EGEAK AAAE+LRLLG
Sbjct: 79 TQELFEDFNREVQPRFTAQTYDLMKHNCNTYSNEASQFLLGKGIPEYIVNLPQEVLNSPMGGMLRPLVEQMTTQMNGADPYSALHHLQQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAADPPQ-------------CKTDGFPILDKHTKPLVGSDTAKAAPGVVARVKALGATVK-LLSEEEIAVLDALPPSMAATKTTPVAPGGFRLMQKILTKDSGWPEKATFLALVLMSLMVLHQAEGTEMEEAMMQVAKRVQTAGNVQEQLSAQALSMAMCSAANCFATAGGSEYMARADVMPGWLDSSLAGLQHERGEVRQMCSALLNNFSLVLSDAIASKTAAGGPAVEMSDETTQILFGALDGLQDETSQLVALRRVLSVGRLVRASGSEAASLINDVGLRDQVEGFLSKAKEGEAKNAAAELLRLLG 502
BLAST of mRNA_S-dermatodea_contig9512.17542.1 vs. uniprot
Match: A0A835YYT1_9STRA (PPPDE putative peptidase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYT1_9STRA) HSP 1 Score: 229 bits (583), Expect = 1.780e-65 Identity = 162/427 (37.94%), Postives = 239/427 (55.97%), Query Frame = 2
Query: 146 LPFARARASQDLFEDWNREINPQFTAHTYDLLTHNCNNYTDEASKFLLGKGIPSYIIDLPNEVLSSPMGGMLRPVLEQMTTQMNGADPYSALHHGNPDA---SHPALGAAVGGGSFPVAAVAPAQPAGGGVAGARSAGSQNVGFPILDKHTKPLVGSDTAKAAPSVAARLKALGAGVDGL--LSEAEGAVLDALPASLAAPKTSPVTPGSFRLVQKIVRQGSGWPDKAPFLALVLMSLMVLHMAEG----EEMGDAMAGVLTRVQASGDL-SAQSLSIAICTAANAFGTPGGGKYMMRADVMPGWLDASLSGLQHERSEVRQMSSALMNNIALLLASDLPDGGEGQGLSDETAQILFGALEGLEDETSQMVALRRLLSAGRLVRKLGSTGTCLVNDVGLPDQVEIFLSKAP-EGEAKGAAAEVLRLL 1393
+ + + +DL +D+ REI+P+FTA TY+L HNCNN++DE S+FLL +GIP YII+LPNEVL +PMG M+ P++EQMTT+++G DP + P + + PA AA PA A + S N+ +P+L KHTKPL+ DT+ +V RL+ G D + +S + VL AL +L A T+ + G++ L+ ++ ++ F + L+ +M LH E +E + + T + G SAQ L++A+C AAN FGTP G M+ ADVM +DA+L L H R++VRQ++SAL+ N AL L ++ + + DE QIL G LEGL DE+ + A RRL++AG ++RK + T LV L V F+ +P +AK A EV LL
Sbjct: 70 IDLGKTQIPEDLLQDFLREISPRFTAMTYNLFRHNCNNFSDEVSRFLLDRGIPEYIINLPNEVLQTPMGRMMVPMVEQMTTELHGGDPLAHAPFQPPASVVHATPAPTAAPXXXXXXXXXXXXXXPA----AVPQRDASGNI-YPLLSKHTKPLLSPDTS-VITTVVKRLE----GSDAVHHMSPGDKEVLKALSTALTAGSTASLPAGAYGLLARL----RAAHQESEFKLMCLLRVMALHAPESLEQAQEQRKCVVPIFTSMGQDGPFRSAQGLAMALCAAANMFGTPAGAALMVEADVMAPCVDAALQHLHHARADVRQLASALVFNFALQLTTNGSSSADSGDMPDEITQILLGCLEGLLDESDDLTAERRLMAAGCVMRKYKTHCTELVEGCELGHHVTQFVHASPANSQAKHLAVEVAHLL 482
BLAST of mRNA_S-dermatodea_contig9512.17542.1 vs. uniprot
Match: A0A225UY86_9STRA (Peptidase n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225UY86_9STRA) HSP 1 Score: 110 bits (274), Expect = 2.880e-22 Identity = 95/283 (33.57%), Postives = 138/283 (48.76%), Query Frame = 2
Query: 170 SQDLFEDWNREINPQFTAHTYDLLTHNCNNYTDEASKFLLGKGIPSYIIDLPNEVLSSPMGGMLRPVLEQMTTQMNGA--DPYSALHHGNPDASHPALGAAVGGGSFPVAAVAPAQPAGGGVAGARSAGSQNVGFPILDKHTKPLVGSDTAKAAPSVAARLKALGAGVDGLLSEAEGAVLDALPASLAAPKTSPVTPGS---FRLVQKIVRQGSGWPDKAPFLALVLMSLMVLH-----MAEGEEMGDAMAGVLTRVQASGDLSAQSLSIAICTAANAFGTPG 988
SQ FE + RE N +FT TYDLL HNCNN++DE +KFL+G GIP YI+DLPNE L+SP G MLRP+LE M QM+ A D A+ +P ++ A+ AA + N + + K + A + R+K+L A + LL++AE + LD L A +AA + +++V K++ QG G P L L + L+ AE + +A+ V T V+ S L+A ++ + NAF PG
Sbjct: 78 SQQQFEQFLRENNARFTDATYDLLRHNCNNFSDEVAKFLVGSGIPQYILDLPNEALNSPFGAMLRPMLENMNNQMHAAPGDQLFAIPFNDPSRANLAVPAATA--------------------------ASNSSVDLASRRFK--ISGTPALHLDKMVQRIKSLNA--EKLLTDAEISSLDELSAHVAADNKEVAATQNVDWWKIVSKLLSQGHGSAFFFPSLGLTRVLLLQSGNASDATAEKKTCFEAVVHV-TEVEPS-PLTAAQKTLVLAVLLNAFANPG 328
BLAST of mRNA_S-dermatodea_contig9512.17542.1 vs. uniprot
Match: A0A2P4XZ58_9STRA (Peptidase n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XZ58_9STRA) HSP 1 Score: 107 bits (268), Expect = 7.020e-22 Identity = 50/87 (57.47%), Postives = 62/87 (71.26%), Query Frame = 2
Query: 143 SLPFARARASQDLFEDWNREINPQFTAHTYDLLTHNCNNYTDEASKFLLGKGIPSYIIDLPNEVLSSPMGGMLRPVLEQMTTQMNGA 403
+LP SQ FE + RE + +FT TYDLL HNCNN++DE +KFL+G GIP YI+DLPNE L+SP G MLRP+LE M QM+ A
Sbjct: 69 TLPLGETSLSQQQFEQFLRENSARFTDATYDLLRHNCNNFSDEVAKFLVGSGIPQYILDLPNEALNSPFGAMLRPMLENMNNQMHAA 155
BLAST of mRNA_S-dermatodea_contig9512.17542.1 vs. uniprot
Match: A0A3M6VI82_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VI82_9STRA) HSP 1 Score: 108 bits (271), Expect = 7.260e-22 Identity = 51/87 (58.62%), Postives = 62/87 (71.26%), Query Frame = 2
Query: 143 SLPFARARASQDLFEDWNREINPQFTAHTYDLLTHNCNNYTDEASKFLLGKGIPSYIIDLPNEVLSSPMGGMLRPVLEQMTTQMNGA 403
++P SQ E + RE + +FT TYDLL HNCNN+TDE +KFL+G GIP YIIDLPNEVL+SP G MLRP+LE M QM+ A
Sbjct: 69 TIPLGETNLSQQQLEQFLRENSSRFTDATYDLLRHNCNNFTDEVAKFLVGSGIPQYIIDLPNEVLNSPFGAMLRPMLENMNNQMHAA 155
BLAST of mRNA_S-dermatodea_contig9512.17542.1 vs. uniprot
Match: A0A2P4Y0L4_9STRA (Peptidase n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4Y0L4_9STRA) HSP 1 Score: 107 bits (268), Expect = 1.780e-21 Identity = 50/87 (57.47%), Postives = 62/87 (71.26%), Query Frame = 2
Query: 143 SLPFARARASQDLFEDWNREINPQFTAHTYDLLTHNCNNYTDEASKFLLGKGIPSYIIDLPNEVLSSPMGGMLRPVLEQMTTQMNGA 403
+LP SQ FE + RE + +FT TYDLL HNCNN++DE +KFL+G GIP YI+DLPNE L+SP G MLRP+LE M QM+ A
Sbjct: 69 TLPLGETSLSQQQFEQFLRENSARFTDATYDLLRHNCNNFSDEVAKFLVGSGIPQYILDLPNEALNSPFGAMLRPMLENMNNQMHAA 155
BLAST of mRNA_S-dermatodea_contig9512.17542.1 vs. uniprot
Match: A0A0P1AJQ7_PLAHL (Uncharacterized conserved protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AJQ7_PLAHL) HSP 1 Score: 107 bits (266), Expect = 3.150e-21 Identity = 101/325 (31.08%), Postives = 162/325 (49.85%), Query Frame = 2
Query: 182 FEDWNREINPQFTAHTYDLLTHNCNNYTDEASKFLLGKGIPSYIIDLPNEVLSSPMGGMLRPVLEQMTTQMNGA--DPYSALHHGNPDASHPALGAAVGGGSFPVAAVAPAQPAGGGVAGARSAGSQNVGFPILDKHTKPLVGSDTAKAAPSVAARLKALGAGVDGLLSEAEGAVLDALPASLAAPKTSPVTPGSFR---LVQKIVRQGSGWPDKAPFLALV-LMSLMVLHMAEG----EEMGDAMAGVLTRVQASGDLSAQSLSIAICTAANAFGTPGGGKYMMRADV--MPGWLDASLSGLQHERSEVRQMSSALMNNIALLL 1120
FE + RE + +FT +YDLL HNCNN++DEA+KFL+G GIP YI+DLPNE L+SP G MLRP+LE M QM+ A D ++ +P ++P V + + + + G L H + G+ V R+ L + LLSE E + LDAL +A + +P SF+ +V K++ +G P L L ++SL ++ +E + +A+ V T V++S SAQ ++ + N F +PG + + A +P ++ A+++ Q E R +S+ +++N L L
Sbjct: 82 FEQFLRENSARFTDASYDLLRHNCNNFSDEAAKFLVGSGIPQYILDLPNEALNSPFGAMLRPMLENMNRQMHAAPEDQLFSIPFNDPSRANP-------------------------VVSSSDSETTSTGLVNLASHRFKISGAPALHLKKMVK-RITTLN--TEKLLSEDEISALDALLTHVANENSKDRSPQSFKWWVIVSKLLAKGHESAFFFPALGLYRVLSLQPVNPSEAASEKKACFEAVVNV-TEVESSSLTSAQK-TLVLSVIVNLFASPGFSEMALAASTRFLP-FVFATIAD-QSASQETRVVSAHIISNCCLAL 374
BLAST of mRNA_S-dermatodea_contig9512.17542.1 vs. uniprot
Match: A0A6D2HV83_9BRAS (PPPDE domain-containing protein n=2 Tax=Coluteocarpeae TaxID=1394505 RepID=A0A6D2HV83_9BRAS) HSP 1 Score: 103 bits (256), Expect = 4.370e-21 Identity = 44/91 (48.35%), Postives = 71/91 (78.02%), Query Frame = 2
Query: 146 LPFARARASQDLFEDWNREINPQFTAHTYDLLTHNCNNYTDEASKFLLGKGIPSYIIDLPNEVLSSPMGGMLRPVLEQMTTQMN-GADPYS 415
+ + QD+FE + +EI+P++TA +Y+LLTHNCNN+++E ++FL+GKGIP YI+ LPNEV++SPMGG+L P+++ + T + GA P++
Sbjct: 70 IELGESHVPQDVFEMYLQEISPRYTAESYNLLTHNCNNFSNEVAQFLVGKGIPDYILQLPNEVMNSPMGGLLMPMIQNLETTLRAGAVPHA 160
BLAST of mRNA_S-dermatodea_contig9512.17542.1 vs. uniprot
Match: V4LZM7_EUTSA (PPPDE domain-containing protein n=1 Tax=Eutrema salsugineum TaxID=72664 RepID=V4LZM7_EUTSA) HSP 1 Score: 103 bits (256), Expect = 5.020e-21 Identity = 43/89 (48.31%), Postives = 69/89 (77.53%), Query Frame = 2
Query: 128 GVSHSSLPFARARASQDLFEDWNREINPQFTAHTYDLLTHNCNNYTDEASKFLLGKGIPSYIIDLPNEVLSSPMGGMLRPVLEQMTTQM 394
G ++ ++ QD+FE + +EI+P++TA +Y+LLTHNCNN+++E ++FL+GKGIP YI+ LPNEVL+SPMGG+L P+++ + T +
Sbjct: 64 GTPVRTIELGQSHIPQDVFEMYLQEISPRYTADSYNLLTHNCNNFSNEVAQFLVGKGIPDYILQLPNEVLNSPMGGLLMPMIQNLETTL 152
BLAST of mRNA_S-dermatodea_contig9512.17542.1 vs. uniprot
Match: G5AJ03_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G5AJ03_PHYSP) HSP 1 Score: 105 bits (263), Expect = 8.010e-21 Identity = 108/336 (32.14%), Postives = 159/336 (47.32%), Query Frame = 2
Query: 161 ARASQDLFEDWNREINPQFTAHTYDLLTHNCNNYTDEASKFLLGKGIPSYIIDLPNEVLSSPMGGMLRPVLEQMTTQMNGA--DPYSALHHGNPDASHPALGAAVGGGSFPVAAVAPAQPAGGGVAGARSAGSQNVGFPILDKHTKPLVGSDTAKAAPSVAARLKALGAGVDGLLSEAEGAVLDALPASLAAPKTSPVTPGS---FRLVQKIVRQGSGWPDKAPFLALVLMSLMVLHMAEG----EEMGDAMAGVLTRVQAS-GDLSAQSLSIAICTAANAFGTPG------GGKYMMRADVMPGWLDASLSGLQHERSEVRQMSSALMNNIALLL 1120
+R+ Q+L E + R+ + +FT TYDLL HNCNN++DE SKFL+G GIP YI+DLPNE L+SP G MLRP+LE M QM+ A D ++ +P ++ A+ AA + P AA S+ S N+ P + D + R+KAL LLS+ E + L+AL A +AA + S +++V+K++ +G F AL L +++L A EE V+ +A L+A ++ + NAF PG G V D S S E R +SS +++N L L
Sbjct: 76 SRSLQEL-EQFLRDNSARFTDATYDLLRHNCNNFSDEVSKFLVGSGIPQYILDLPNEALNSPFGAMLRPMLENMNNQMHAAPGDQLFSIPFNDPSRANLAVPAASPTSTAPTAA---------------SSNSVNLASRRFKISGTPALHLD------KMVKRVKALN--TQSLLSDDEVSALEALSAHVAAGNQEVDSTQSEQWWKIVKKLLAEGH--ESSFFFAALGLSRVLLLQPANASVATEEKKPCFEAVVHVTEAEPSPLTAAQKTLLLAVLLNAFANPGFSDLALSGSTRFLPFVFATITDPSTS------QEARVLSSHIISNCCLAL 379 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig9512.17542.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig9512.17542.1 >prot_S-dermatodea_contig9512.17542.1 ID=prot_S-dermatodea_contig9512.17542.1|Name=mRNA_S-dermatodea_contig9512.17542.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=353bp MGGMLRPVLEQMTTQMNGADPYSALHHGNPDASHPALGAAVGGGSFPVAAback to top mRNA from alignment at S-dermatodea_contig9512:95..8140- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig9512.17542.1 ID=mRNA_S-dermatodea_contig9512.17542.1|Name=mRNA_S-dermatodea_contig9512.17542.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=8046bp|location=Sequence derived from alignment at S-dermatodea_contig9512:95..8140- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig9512:95..8140- >mRNA_S-dermatodea_contig9512.17542.1 ID=mRNA_S-dermatodea_contig9512.17542.1|Name=mRNA_S-dermatodea_contig9512.17542.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=2118bp|location=Sequence derived from alignment at S-dermatodea_contig9512:95..8140- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |