prot_S-dermatodea_contig9512.17542.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig9512.17542.1
Unique Nameprot_S-dermatodea_contig9512.17542.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length353
Homology
BLAST of mRNA_S-dermatodea_contig9512.17542.1 vs. uniprot
Match: A0A6H5L145_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L145_9PHAE)

HSP 1 Score: 376 bits (965), Expect = 1.760e-124
Identity = 229/379 (60.42%), Postives = 259/379 (68.34%), Query Frame = 0
Query:    1 MGGMLRPVLEQMTTQMNGADPYSALHH---------------------GNPDASHPALGAAVGGGSFPVAAVAPAQPAGGGVAGARSAGSQNVGFPILDKHTKPLVGSDTAKAAPSVAARLKALGAGVDGLLSEAEGAVLDALPASLAAPKTSPVTPGSFRLVQKIVRQGSGWPDKAPFLALVLMSLMVLHMAEGEEMGDAMAGVLTRVQASGD----LSAQSLSIAICTAANAFGTPGGGKYMMRADVMPGWLDASLSGLQHERSEVRQMSSALMNNIALLL----ASDLPDGGEGQGLSDETAQILFGALEGLEDETSQMVALRRLLSAGRLVRKLGSTGTCLVNDVGLPDQVEIFLSKAPEGEAKGAAAEVLRLLG 350
            MGGMLRP++EQMTTQMNGADPYSALHH                                           A  P Q              +  GFPILDKHTKPLVGSDTAKAAP V AR+KALGA V  LLSE E AVLDALP S+AA KT+PV PG FRL+QKI+ + SGWP+KA FLALVLMSLMVLH AEG EM +AM  V  RVQ +G+    LSAQ+LS+A+C+AAN F T GG +YM RADVMPGWLD+SL+GLQHER EVRQM SAL+NN +L+L    AS    GG    +SDET QILFGAL+GL+DETSQ+VALRR+LS GRLVR  GS    L+NDVGL DQVE FLSKA EGEAK AAAE+LRLLG
Sbjct:  138 MGGMLRPLVEQMTTQMNGADPYSALHHLQQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAADPPQ-------------CKTDGFPILDKHTKPLVGSDTAKAAPGVVARVKALGATVK-LLSEEEIAVLDALPPSMAATKTTPVAPGGFRLMQKILTKDSGWPEKATFLALVLMSLMVLHQAEGTEMEEAMMQVAKRVQTAGNVQEQLSAQALSMAMCSAANCFATAGGSEYMARADVMPGWLDSSLAGLQHERGEVRQMCSALLNNFSLVLSDAIASKTAAGGPAVEMSDETTQILFGALDGLQDETSQLVALRRVLSVGRLVRASGSEAASLINDVGLRDQVEGFLSKAKEGEAKNAAAELLRLLG 502          
BLAST of mRNA_S-dermatodea_contig9512.17542.1 vs. uniprot
Match: A0A835YYT1_9STRA (PPPDE putative peptidase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYT1_9STRA)

HSP 1 Score: 146 bits (369), Expect = 2.950e-36
Identity = 125/360 (34.72%), Postives = 187/360 (51.94%), Query Frame = 0
Query:    1 MGGMLRPVLEQMTTQMNGADPYSALHHGNPDA---SHPALGAAVGGGSFPVAAVAPAQPAGGGVAGARSAGSQNVGFPILDKHTKPLVGSDTAKAAPSVAARLKALGAGVDGL--LSEAEGAVLDALPASLAAPKTSPVTPGSFRLVQKIVRQGSGWPDKAPFLALVLMSLMVLHMAEG----EEMGDAMAGVLTRVQASGDL-SAQSLSIAICTAANAFGTPGGGKYMMRADVMPGWLDASLSGLQHERSEVRQMSSALMNNIALLLASDLPDGGEGQGLSDETAQILFGALEGLEDETSQMVALRRLLSAGRLVRKLGSTGTCLVNDVGLPDQVEIFLSKAP-EGEAKGAAAEVLRLL 349
            MG M+ P++EQMTT+++G DP +      P +   + PA  AA               PA    A  +   S N+ +P+L KHTKPL+  DT+    +V  RL+    G D +  +S  +  VL AL  +L A  T+ +  G++ L+ ++         ++ F  + L+ +M LH  E     +E    +  + T +   G   SAQ L++A+C AAN FGTP G   M+ ADVM   +DA+L  L H R++VRQ++SAL+ N AL L ++     +   + DE  QIL G LEGL DE+  + A RRL++AG ++RK  +  T LV    L   V  F+  +P   +AK  A EV  LL
Sbjct:  137 MGRMMVPMVEQMTTELHGGDPLAHAPFQPPASVVHATPAPTAAPXXXXXXXXXXXXXXPA----AVPQRDASGNI-YPLLSKHTKPLLSPDTS-VITTVVKRLE----GSDAVHHMSPGDKEVLKALSTALTAGSTASLPAGAYGLLARL----RAAHQESEFKLMCLLRVMALHAPESLEQAQEQRKCVVPIFTSMGQDGPFRSAQGLAMALCAAANMFGTPAGAALMVEADVMAPCVDAALQHLHHARADVRQLASALVFNFALQLTTNGSSSADSGDMPDEITQILLGCLEGLLDESDDLTAERRLMAAGCVMRKYKTHCTELVEGCELGHHVTQFVHASPANSQAKHLAVEVAHLL 482          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig9512.17542.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L145_9PHAE1.760e-12460.42Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YYT1_9STRA2.950e-3634.72PPPDE putative peptidase domain-containing protein... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013535PUL domainPFAMPF08324PULcoord: 110..311
e-value: 3.4E-8
score: 33.0
IPR013535PUL domainPROSITEPS51396PULcoord: 72..348
score: 10.14
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 84..349
e-value: 9.7E-6
score: 26.8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig9512contigS-dermatodea_contig9512:221..7372 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig9512.17542.1mRNA_S-dermatodea_contig9512.17542.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig9512 95..8140 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig9512.17542.1 ID=prot_S-dermatodea_contig9512.17542.1|Name=mRNA_S-dermatodea_contig9512.17542.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=353bp
MGGMLRPVLEQMTTQMNGADPYSALHHGNPDASHPALGAAVGGGSFPVAA
VAPAQPAGGGVAGARSAGSQNVGFPILDKHTKPLVGSDTAKAAPSVAARL
KALGAGVDGLLSEAEGAVLDALPASLAAPKTSPVTPGSFRLVQKIVRQGS
GWPDKAPFLALVLMSLMVLHMAEGEEMGDAMAGVLTRVQASGDLSAQSLS
IAICTAANAFGTPGGGKYMMRADVMPGWLDASLSGLQHERSEVRQMSSAL
MNNIALLLASDLPDGGEGQGLSDETAQILFGALEGLEDETSQMVALRRLL
SAGRLVRKLGSTGTCLVNDVGLPDQVEIFLSKAPEGEAKGAAAEVLRLLG
HA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013535PUL_dom
IPR011989ARM-like