prot_S-dermatodea_contig9493.17523.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig9493.17523.1
Unique Nameprot_S-dermatodea_contig9493.17523.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length250
Homology
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BLAST of mRNA_S-dermatodea_contig9493.17523.1 vs. uniprot
Match: D7G9G1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9G1_ECTSI)

HSP 1 Score: 57.4 bits (137), Expect = 6.460e-6
Identity = 58/154 (37.66%), Postives = 72/154 (46.75%), Query Frame = 0 
Query:  102 KSPASDLGSDHMTCSTQWS-VSQFSGGSGSTKSNAGEDRSFVSANPPPTRRKTFCAFTTSPRPPVPAVAEAK----SESLAPFAVAVSPSVSRDSGDLWAAGSQKKTSRVSTRRASGTGTDENEAGGTPS----RNARLDGLRARSASAPIIWD 246
            KSP S+ GS H TCSTQWS +   S GSG++ + +    S +SA+P   R     + TTSPRP  P +AEAK    + S    AV VS    +   + W     K    VS              G TPS           LRARS SAP+IWD
Sbjct:  290 KSPPSEPGS-HKTCSTQWSEMESQSQGSGNSYAGSTTSSSAMSAHPAGRRSVHTWSSTTSPRPHAPTIAEAKRHPPASSSPSLAVVVSTGGPKSRPEPW-----KPREDVS-------------GGDTPSLLTXXXXXXXXLRARSESAPMIWD 424
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig9493.17523.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G9G1_ECTSI6.460e-637.66Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig9493contigS-dermatodea_contig9493:4348..5270 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig9493.17523.1mRNA_S-dermatodea_contig9493.17523.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig9493 4348..7473 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig9493.17523.1 ID=prot_S-dermatodea_contig9493.17523.1|Name=mRNA_S-dermatodea_contig9493.17523.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=250bp
CRQLESPERGAFGPAPRLSRTFERGGPGRRSAEKKDDERWDERENAGAVR
AADAKAVEYDSVLPRLEEPSPRIATNSSLPTGKLNGWASVNSIEAWSDNN
SKSPASDLGSDHMTCSTQWSVSQFSGGSGSTKSNAGEDRSFVSANPPPTR
RKTFCAFTTSPRPPVPAVAEAKSESLAPFAVAVSPSVSRDSGDLWAAGSQ
KKTSRVSTRRASGTGTDENEAGGTPSRNARLDGLRARSASAPIIWDDQP*
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