mRNA_S-dermatodea_contig1286.1747.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig1286.1747.1 vs. uniprot
Match: D7FR81_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR81_ECTSI) HSP 1 Score: 176 bits (447), Expect = 1.280e-48 Identity = 90/128 (70.31%), Postives = 102/128 (79.69%), Query Frame = 1
Query: 28 GGDNGFPSTALPFLAAEKDAALDGAVANSSKLKGYEGHMSALGKLGAGSPTSRLFPTPGKKLMKSVGQAVQEWAMIQEGDRLCLGLSGGKDSMTLLHVLLALKKKAPINFEVACATVDPQTASFDPSP 411
GG+NG + + A +G + KLKGYEGHMSALGKLGAGS SRLFPTPGKK+M++VGQAVQ W MI++GDRLCLGLSGGKDSMTLLHVLL L+K+API FEVACATVDPQT SFDPSP
Sbjct: 822 GGENG---------SVPQGANGEGIESGGGKLKGYEGHMSALGKLGAGSAESRLFPTPGKKIMRAVGQAVQAWRMIEDGDRLCLGLSGGKDSMTLLHVLLHLQKRAPITFEVACATVDPQTPSFDPSP 940
BLAST of mRNA_S-dermatodea_contig1286.1747.1 vs. uniprot
Match: A0A485LRI5_9STRA (Aste57867_23115 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LRI5_9STRA) HSP 1 Score: 134 bits (336), Expect = 1.120e-33 Identity = 69/136 (50.74%), Postives = 93/136 (68.38%), Query Frame = 1
Query: 46 PSTALPFLAAEKDAALDGA--------------VANSSKLKGYEGHMSALGKLGAGSPTSRLFPTPGKKLMKSVGQAVQEWAMIQEGDRLCLGLSGGKDSMTLLHVLLALKKKAPINFEVACATVDPQTASFDPSP 411
P+ A P AA L G A+S+ L+G E +++ K+ A T++LFPTP KK+M+ VGQA+ +W MI++GDRL LG+SGGKDS++LLH+LLAL+K+AP+ F +ACATVDPQTASFDPSP
Sbjct: 648 PTLAAPAAAAAAPVCLTGTCPIVKTEKYPLRNPTADSNPLQGLEQAIASTDKISAQVTTTQLFPTPPKKMMRLVGQAMMQWQMIEDGDRLLLGVSGGKDSLSLLHILLALQKRAPVRFTLACATVDPQTASFDPSP 783
BLAST of mRNA_S-dermatodea_contig1286.1747.1 vs. uniprot
Match: A0A024U7E6_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U7E6_9STRA) HSP 1 Score: 133 bits (335), Expect = 1.530e-33 Identity = 69/136 (50.74%), Postives = 95/136 (69.85%), Query Frame = 1
Query: 16 PLRSGGDNGFP---STALPFLAAEKDA-ALDGAVANSSKLKGYEGHMSALGKLGAGSPTSRLFPTPGKKLMKSVGQAVQEWAMIQEGDRLCLGLSGGKDSMTLLHVLLALKKKAPINFEVACATVDPQTASFDPSP 411
P RS + P + PF+A + + L A+++ L+G E ++A GK+ T+RLFP P KK+M+ VGQA+ +W MIQ+GDRL LG+SGGKDS++LLH+LL L+K+AP+ F +ACATVDPQT SFDPSP
Sbjct: 642 PTRSSAPSAEPVCLTGMCPFIAPKTEKYPLRDPSASTNPLQGLEQAIAATGKIAQQVTTTRLFPQPPKKMMRLVGQAMMQWQMIQDGDRLLLGVSGGKDSLSLLHILLTLQKRAPVRFTIACATVDPQTPSFDPSP 777
BLAST of mRNA_S-dermatodea_contig1286.1747.1 vs. uniprot
Match: A0A7S3XUF4_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XUF4_HETAK) HSP 1 Score: 127 bits (318), Expect = 3.610e-33 Identity = 57/77 (74.03%), Postives = 69/77 (89.61%), Query Frame = 1
Query: 181 SRLFPTPGKKLMKSVGQAVQEWAMIQEGDRLCLGLSGGKDSMTLLHVLLALKKKAPINFEVACATVDPQTASFDPSP 411
++LFP P KK+M++VG A++EW MI+EGDRLCLGLSGGKDS+ LLHVLLAL++KAPI FE+ACATVDP TASFDP P
Sbjct: 57 AKLFPAPPKKMMRTVGTAIKEWGMIKEGDRLCLGLSGGKDSLALLHVLLALQRKAPIRFELACATVDPMTASFDPRP 133
BLAST of mRNA_S-dermatodea_contig1286.1747.1 vs. uniprot
Match: W4GX72_9STRA (Uncharacterized protein n=6 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GX72_9STRA) HSP 1 Score: 130 bits (327), Expect = 1.830e-32 Identity = 61/102 (59.80%), Postives = 82/102 (80.39%), Query Frame = 1
Query: 106 ANSSKLKGYEGHMSALGKLGAGSPTSRLFPTPGKKLMKSVGQAVQEWAMIQEGDRLCLGLSGGKDSMTLLHVLLALKKKAPINFEVACATVDPQTASFDPSP 411
A+S+ L+G E ++A K+ T++LFPTP KKLM+ VGQA+ +W MI++GDRL LG+SGGKDS++LLH+LL L+K+AP+ F +ACATVDPQT SFDPSP
Sbjct: 678 ADSNPLQGLEQAIAATDKIAQQVTTTQLFPTPPKKLMRLVGQAMMQWQMIEDGDRLLLGVSGGKDSLSLLHILLTLQKRAPVRFTIACATVDPQTPSFDPSP 779
BLAST of mRNA_S-dermatodea_contig1286.1747.1 vs. uniprot
Match: A0A6G0WTZ0_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WTZ0_9STRA) HSP 1 Score: 130 bits (326), Expect = 2.500e-32 Identity = 64/120 (53.33%), Postives = 87/120 (72.50%), Query Frame = 1
Query: 52 TALPFLAAEKDAALDGAVANSSKLKGYEGHMSALGKLGAGSPTSRLFPTPGKKLMKSVGQAVQEWAMIQEGDRLCLGLSGGKDSMTLLHVLLALKKKAPINFEVACATVDPQTASFDPSP 411
T P +EK + A +S+ L+G + +++ K+ T++LFP P KKLM+ VGQA+ +W MIQ+GDRL LG+SGGKDS++LLH+LL L+K+AP+ F VACATVDPQT SFDPSP
Sbjct: 670 TCPPPTKSEKYPLRNQAAVDSNPLQGLQQAIASTDKISVQVSTTQLFPQPPKKLMRLVGQAMMQWKMIQDGDRLLLGVSGGKDSLSLLHILLTLQKRAPVRFSVACATVDPQTPSFDPSP 789
BLAST of mRNA_S-dermatodea_contig1286.1747.1 vs. uniprot
Match: I2CPH6_NANGC (Pp-loop domain protein (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CPH6_NANGC) HSP 1 Score: 124 bits (311), Expect = 7.200e-32 Identity = 58/75 (77.33%), Postives = 67/75 (89.33%), Query Frame = 1
Query: 187 LFPTPGKKLMKSVGQAVQEWAMIQEGDRLCLGLSGGKDSMTLLHVLLALKKKAPINFEVACATVDPQTASFDPSP 411
LFP KKL+K VG+A+++W MI+EGDRLCLGLSGGKDS+TLLHVLL L+KKAPI F VACATVDPQT+SFDPSP
Sbjct: 8 LFPPVPKKLLKQVGEAIRDWDMIKEGDRLCLGLSGGKDSLTLLHVLLHLQKKAPIRFSVACATVDPQTSSFDPSP 82
BLAST of mRNA_S-dermatodea_contig1286.1747.1 vs. uniprot
Match: A0A812RBY0_SYMMI (TtcA protein (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812RBY0_SYMMI) HSP 1 Score: 124 bits (312), Expect = 6.840e-31 Identity = 64/118 (54.24%), Postives = 82/118 (69.49%), Query Frame = 1
Query: 58 LPFLAAEKDAALDGAVANSSKLKGYEGHMSALGKLGAGSPTSRLFPTPGKKLMKSVGQAVQEWAMIQEGDRLCLGLSGGKDSMTLLHVLLALKKKAPINFEVACATVDPQTASFDPSP 411
+ F A + DA+ G A ++ G + + LG GS TP KK++K VGQA+ +W MI+EGDRL LGLSGGKDS+TLLH+LL L++KAP+NF +ACATVDPQT SFDPSP
Sbjct: 286 MVFGADKTDASSSGGAAVATSCGGDDSYTP---NLGDGSTGRAKVATPPKKILKPVGQAIADWGMIEEGDRLLLGLSGGKDSLTLLHILLHLQRKAPVNFTIACATVDPQTESFDPSP 400
BLAST of mRNA_S-dermatodea_contig1286.1747.1 vs. uniprot
Match: A0A484EB29_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EB29_BRELC) HSP 1 Score: 125 bits (313), Expect = 1.410e-30 Identity = 57/77 (74.03%), Postives = 69/77 (89.61%), Query Frame = 1
Query: 181 SRLFPTPGKKLMKSVGQAVQEWAMIQEGDRLCLGLSGGKDSMTLLHVLLALKKKAPINFEVACATVDPQTASFDPSP 411
+ LFPTP KKL++SVGQA+ +W MIQEGDRL LG+SGGKDS++LLHVLL+ +K+AP+ FEVACATVDPQT SFDPSP
Sbjct: 746 NNLFPTPPKKLLRSVGQAMMQWDMIQEGDRLLLGVSGGKDSLSLLHVLLSFQKRAPVRFEVACATVDPQTPSFDPSP 822
BLAST of mRNA_S-dermatodea_contig1286.1747.1 vs. uniprot
Match: A0A662Y5N6_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y5N6_9STRA) HSP 1 Score: 124 bits (311), Expect = 2.640e-30 Identity = 70/139 (50.36%), Postives = 88/139 (63.31%), Query Frame = 1
Query: 13 YPLRSGGDNGFPSTALPFLAAEKDAALDGAVANSSKLKGYEGHMSALG------KLGAGSPTSRLFPTPGKKLMKSVGQAVQEWAMIQEGDRLCLGLSGGKDSMTLLHVLLALKKKAPINFEVACATVDPQTASFDPSP 411
YPLRS NG STA P + G A + +A + + ++LFPTP KKLM+ VGQA+ +W MIQ+GDRL LG+SGGKDS++LLHVLL +K+AP+ FE+ACATVDPQTASFDPSP
Sbjct: 711 YPLRST-TNGGASTATPVGERSRGDCSTGRCAATCAPPSXXXATTATSVQEVTTAMSQKTAATKLFPTPPKKLMRWVGQALMQWDMIQDGDRLLLGVSGGKDSLSLLHVLLRFQKRAPVRFELACATVDPQTASFDPSP 848 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig1286.1747.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig1286.1747.1 >prot_S-dermatodea_contig1286.1747.1 ID=prot_S-dermatodea_contig1286.1747.1|Name=mRNA_S-dermatodea_contig1286.1747.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=137bp DSYKYPLRSGGDNGFPSTALPFLAAEKDAALDGAVANSSKLKGYEGHMSAback to top mRNA from alignment at S-dermatodea_contig1286:6012..7709- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig1286.1747.1 ID=mRNA_S-dermatodea_contig1286.1747.1|Name=mRNA_S-dermatodea_contig1286.1747.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=1698bp|location=Sequence derived from alignment at S-dermatodea_contig1286:6012..7709- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig1286:6012..7709- >mRNA_S-dermatodea_contig1286.1747.1 ID=mRNA_S-dermatodea_contig1286.1747.1|Name=mRNA_S-dermatodea_contig1286.1747.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=822bp|location=Sequence derived from alignment at S-dermatodea_contig1286:6012..7709- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |