mRNA_S-dermatodea_contig12856.1745.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig12856.1745.1 vs. uniprot
Match: A0A6H5J7N3_9PHAE (E1 ubiquitin-activating enzyme n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5J7N3_9PHAE) HSP 1 Score: 382 bits (981), Expect = 2.310e-122 Identity = 196/231 (84.85%), Postives = 207/231 (89.61%), Query Frame = 1
Query: 1 DEAVYVAALDSMSVPEFKPADGVKIATTEAEAKEQGAGGGG--GHLEDVDTQCERMLKELPQPADMKDFRLQVVDFDKDLDDHMEFVTAASNLRARVYKIPEADMHRSRQIAGKIIPAIATTTALVTGLVCMEVYKILQEMPLESYKNWFLNLALPQFSCSEPLPPAKTTTMIKGNEWKWSAWDSLELEQADITLQGLFERMKEEYGLEVTMLSHGVSILYSFFANKKKIA 687
D+AVY + L M VP FKP DGVKIATTEAEAKEQ G LEDVD QCERML ELP+PADMKDFRL+VV+FDKDLD+HMEFVTAASNLRARVYKIPEADMHRSRQIAGKIIPAIATTTALVTGLV MEVYKI+QE PLESYKNWFLNLALPQFSCSEPLPPAKT TMIKG+EWKWSAWDSLELE ADITLQ LF+ MKE+YGLEVTMLSHGVSILYSFFA+KKKIA
Sbjct: 821 DDAVYASTLSQMEVPVFKPVDGVKIATTEAEAKEQATGXXXXXAQLEDVDAQCERMLGELPKPADMKDFRLEVVEFDKDLDEHMEFVTAASNLRARVYKIPEADMHRSRQIAGKIIPAIATTTALVTGLVSMEVYKIMQEKPLESYKNWFLNLALPQFSCSEPLPPAKTATMIKGSEWKWSAWDSLELEGADITLQQLFDIMKEKYGLEVTMLSHGVSILYSFFASKKKIA 1051
BLAST of mRNA_S-dermatodea_contig12856.1745.1 vs. uniprot
Match: A0A836CIM1_9STRA (Ubiquitin-activating enzyme E1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIM1_9STRA) HSP 1 Score: 301 bits (771), Expect = 2.580e-92 Identity = 152/237 (64.14%), Postives = 182/237 (76.79%), Query Frame = 1
Query: 1 DEAVYVAALDSMSVPEFKPADGVKIATTEAEAKEQGAGGGGGH--------LEDVDTQCERMLKELPQPADMKDFRLQVVDFDKDLDDHMEFVTAASNLRARVYKIPEADMHRSRQIAGKIIPAIATTTALVTGLVCMEVYKILQEMPLESYKNWFLNLALPQFSCSEPLPPAKTTTMIKGNEWKWSAWDSLELEQADITLQGLFERMKEEYGLEVTMLSHGVSILYSFFANKKKIA 687
D+A +AAL S+ VP+F PA+GVKIA TEAEAKE + D D QC ++ LP+PA + FRL V+FDKD+D HM VTAASNLRAR YKIPEADMHRSR IAGKIIPAIATTTALVTGLVC+E+ K+ QE PLE+YKNWFLNLALPQF+CSEP+PPA T +KG EW+WSAWD +++++ DITL LF +++EYGLEVTMLSHGVSIL+SFFA+KKK A
Sbjct: 740 DDAAVLAALSSVIVPDFTPAEGVKIAVTEAEAKEXXXXXXXXXXXXXXXXFMMDTDAQCAALVDALPEPASLGAFRLAAVEFDKDVDAHMVLVTAASNLRARCYKIPEADMHRSRLIAGKIIPAIATTTALVTGLVCLELIKVAQEKPLEAYKNWFLNLALPQFACSEPIPPATTAVKLKGREWRWSAWDCIDVDRGDITLAALFALLRDEYGLEVTMLSHGVSILFSFFASKKKAA 976
BLAST of mRNA_S-dermatodea_contig12856.1745.1 vs. uniprot
Match: A0A7S2G964_9STRA (E1 ubiquitin-activating enzyme n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G964_9STRA) HSP 1 Score: 266 bits (679), Expect = 4.670e-79 Identity = 140/239 (58.58%), Postives = 172/239 (71.97%), Query Frame = 1
Query: 1 DEAVYVAALDSMSVPEFKPADGVKIATTEAEAKEQGAGGGGG--------HLEDVDTQCERMLKELPQPADMKDFRLQVVDFDKDLDDHMEFVTAASNLRARVYKIPEADMHRSRQIAGKIIPAIATTTALVTGLVCMEVYKILQEMPLESYKNWFLNLALPQFSCSEPLPPAKTTTMIKGN----EWKWSAWDSLELEQADITLQGLFERMKEEYGLEVTMLSHGVSILYSFFANKKK 681
D+A ++A L ++ VP F P DGVKI T E L DVD QC+ ++ +LP PA + F+L V+FDKD+D+HMEFVTAASNLRAR YKIPEADMHRSR IAGKIIPAIATTTALVTGLVC+E+YK++Q P+E+YKN F+NLA+P F+ SEP PPA T I+ + EWKWSAWD L+++ DITL+ L M++ YGLE+TMLSHGVSILYSFF NKKK
Sbjct: 759 DDAYFLAFLPNVVVPGFTPKDGVKIKTPEEXXXXXXXXXXXXXXXXXXDEELMDVDAQCDEIIAQLPTPASLAGFQLNPVEFDKDIDEHMEFVTAASNLRARNYKIPEADMHRSRLIAGKIIPAIATTTALVTGLVCLELYKVIQSKPVEAYKNGFVNLAIPVFAFSEPQPPATTLAKIQKDGAPFEWKWSAWDRLDIKLGDITLKQLIAHMEDAYGLELTMLSHGVSILYSFFQNKKK 997
BLAST of mRNA_S-dermatodea_contig12856.1745.1 vs. uniprot
Match: A0A7S4D9B8_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D9B8_HETAK) HSP 1 Score: 253 bits (646), Expect = 2.730e-77 Identity = 132/230 (57.39%), Postives = 164/230 (71.30%), Query Frame = 1
Query: 1 DEAVYVAALDSMSVPEFKPADGVKIATTEAEAKEQGAGGGGG-HLEDVDTQCERMLKELPQPADMKDFRLQVVDFDKDLDDHMEFVTAASNLRARVYKIPEADMHRSRQIAGKIIPAIATTTALVTGLVCMEVYKILQE-MPLESYKNWFLNLALPQFSCSEPLPPAKTTTMIKGNEWKWSAWDSLELEQADITLQGLFERMKEEYGLEVTMLSHGVSILYSFFANKKKI 684
D A + L ++ VPEF P GVKIA E E D++ Q +++++ELP P+++ FRL VDFDKDLDDHM + A SNLRAR Y IPEAD+HRSR IAGKIIPAI+TTTALV GLVC+E+YK+ Q PL +YKN F NLALP F+ SEP PPAKTT ++G EW+WSAWD +++ D+TL+ + ++E GLEVTMLSHGVSILYSFFANKKKI
Sbjct: 326 DAAYFQGVLPNVMVPEFVPRRGVKIAADEKEXXXXXXXXXXSISATDLEGQAKQIIEELPSPSELAGFRLVPVDFDKDLDDHMTLIAATSNLRARNYAIPEADLHRSRLIAGKIIPAISTTTALVAGLVCLELYKVFQGGKPLAAYKNGFANLALPLFAFSEPQPPAKTTGRLRGREWEWSAWDRIDVRLGDVTLKQFLDHFQDELGLEVTMLSHGVSILYSFFANKKKI 555
BLAST of mRNA_S-dermatodea_contig12856.1745.1 vs. uniprot
Match: K0SHI3_THAOC (E1 ubiquitin-activating enzyme n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SHI3_THAOC) HSP 1 Score: 261 bits (666), Expect = 4.810e-77 Identity = 132/233 (56.65%), Postives = 172/233 (73.82%), Query Frame = 1
Query: 1 DEAVYVAALDSMSVPEFKPADGVKIATTEAEAKEQGAGGGGGHLEDVDTQCERMLKELPQPADMKDFRLQVVDFDKDLDDHMEFVTAASNLRARVYKIPEADMHRSRQIAGKIIPAIATTTALVTGLVCMEVYKIL----QEMPLESYKNWFLNLALPQFSCSEPLPPAKTTTMIKGNEWKWSAWDSLELEQADITLQGLFERMKEEYGLEVTMLSHGVSILYSFFANKKKIA 687
DEA +V L ++ VP+F PADGVKIA EAEAKE+ G +E+ D + +L LP+P ++ F+L ++FDKDLDDHM FVTA SNLRA Y IP D HRSR IAG+IIPAIATTTALVTGL+C+E+YKI+ +E+ +++YKN F+NLA+P + SEP PAKT ++KG EW W+AWDSL++ DITL+ + EYGL+V+M+SHGVSIL+SFFANKKK+A
Sbjct: 818 DEAYFVEVLQNVIVPDFTPADGVKIAANEAEAKEEAKKDEPGDMEESD--ADAVLAGLPKPGELAGFKLNPIEFDKDLDDHMLFVTACSNLRALNYSIPTEDTHRSRAIAGRIIPAIATTTALVTGLICLELYKIIGTPQKELKIDAYKNGFVNLAIPFMTLSEPTAPAKTKAVVKGKEWNWTAWDSLDVNLGDITLKEFITHFENEYGLDVSMISHGVSILFSFFANKKKLA 1048
BLAST of mRNA_S-dermatodea_contig12856.1745.1 vs. uniprot
Match: A0A7S1BIN6_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BIN6_9STRA) HSP 1 Score: 250 bits (639), Expect = 5.630e-77 Identity = 124/233 (53.22%), Postives = 170/233 (72.96%), Query Frame = 1
Query: 1 DEAVYVAALDSMSVPEFKPADGVKIATTEAEAKEQGAGGGGGHLEDVDTQCERMLKELPQPADMKDFRLQVVDFDKDLDDHMEFVTAASNLRARVYKIPEADMHRSRQIAGKIIPAIATTTALVTGLVCMEVYKIL----QEMPLESYKNWFLNLALPQFSCSEPLPPAKTTTMIKGNEWKWSAWDSLELEQADITLQGLFERMKEEYGLEVTMLSHGVSILYSFFANKKKIA 687
+E + L + +P+F P GVKI T E E +E+ DVD++C+++ ELP P+ + FRL++++FDKD+D+HM FVTA SNLRA Y+IP D H+SR IAG+IIPAIATTTALVTGL+C+E+YK++ +E+P+E+YKN FLNLA+P + +EP PAKT M+KG EW+WSAWDS+ + DITL+ E ++EY LE+ MLS+GVS+LYSFFANKKK+A
Sbjct: 253 EEEYFQQFLPEIIIPDFTPKQGVKIQTKEDEKEEEAPPAD----MDVDSECDKIFAELPAPSSLAGFRLELIEFDKDIDEHMLFVTACSNLRAINYQIPTEDTHKSRAIAGRIIPAIATTTALVTGLICLEMYKVVGSANKELPIEAYKNSFLNLAIPFMTSTEPQGPAKTKAMLKGKEWEWSAWDSIHMNIGDITLKEFMEYFEKEYNLEINMLSYGVSLLYSFFANKKKVA 481
BLAST of mRNA_S-dermatodea_contig12856.1745.1 vs. uniprot
Match: A0A7S4IAT4_9STRA (E1 ubiquitin-activating enzyme n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4IAT4_9STRA) HSP 1 Score: 260 bits (665), Expect = 6.290e-77 Identity = 131/232 (56.47%), Postives = 173/232 (74.57%), Query Frame = 1
Query: 1 DEAVYVAALDSMSVPEFKPADGVKIATTEAEAKEQGAGGGGGHLEDVDTQCERMLKELPQPADMKDFRLQVVDFDKDLDDHMEFVTAASNLRARVYKIPEADMHRSRQIAGKIIPAIATTTALVTGLVCMEVYKIL----QEMPLESYKNWFLNLALPQFSCSEPLPPAKTTTMIKGNEWKWSAWDSLELEQADITLQGLFERMKEEYGLEVTMLSHGVSILYSFFANKKKI 684
DE + L ++ VP+F P +GVKIA +AEAKE G GG ++DVD + +++L LP+P+++ F+L VDFDKD+DDHM FVTA SNLRA Y IP D HRSR IAG+IIPAIATTTALVTGLVC+E+YKI+ +++ L++YKN F+NLA+P + SEP PA T M+KG EW W+AWDSL+++ DITL+ + ++EY LEV+MLS GVSIL+SFFANKKK+
Sbjct: 810 DEEYFRDVLKTVIVPDFSPQEGVKIAANDAEAKENDHSGAGG-MDDVDAEYDKLLGSLPKPSELVGFKLNPVDFDKDIDDHMLFVTACSNLRALNYSIPTEDTHRSRAIAGRIIPAIATTTALVTGLVCLELYKIVGTARKDLKLDAYKNGFVNLAIPFMTLSEPTSPASTKAMLKGKEWNWTAWDSLDMDMGDITLREFVDHFEKEYNLEVSMLSQGVSILFSFFANKKKV 1040
BLAST of mRNA_S-dermatodea_contig12856.1745.1 vs. uniprot
Match: A0A7S2RXQ6_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2RXQ6_9STRA) HSP 1 Score: 254 bits (650), Expect = 2.900e-76 Identity = 126/232 (54.31%), Postives = 173/232 (74.57%), Query Frame = 1
Query: 1 DEAVYVAALDSMSVPEFKPADGVKIATTEAEAKEQGAGGGGGHLEDVDTQCERMLKELPQPADMKDFRLQVVDFDKDLDDHMEFVTAASNLRARVYKIPEADMHRSRQIAGKIIPAIATTTALVTGLVCMEVYKIL----QEMPLESYKNWFLNLALPQFSCSEPLPPAKTTTMIKGNEWKWSAWDSLELEQADITLQGLFERMKEEYGLEVTMLSHGVSILYSFFANKKKI 684
DE + LD++ VPEF PA+GVKIA E+EAK+Q G +++D +C+ ++ +LP+ +++ F++ ++FDKD+D+HM FVTA SNLRA Y IP D HRSR IAG+IIPAIATTTALVTGLVC+++YK++ +E+ L+ +KN F+NLA+P + SEP PP KT ++KG EW W+AWDSL+LE DITL+ L + EY L+++MLSHGVSILYSFFANKKK+
Sbjct: 523 DEEYFRQVLDNVIVPEFTPANGVKIAANESEAKQQNDEAPG---DNIDDECDEIIAQLPKASELAGFKVNPIEFDKDVDEHMLFVTACSNLRALNYWIPTEDTHRSRAIAGRIIPAIATTTALVTGLVCLDLYKVIGSARKELTLDMFKNAFINLAIPFMTLSEPTPPEKTKCILKGKEWNWTAWDSLDLELGDITLKELMDHFATEYNLDISMLSHGVSILYSFFANKKKV 751
BLAST of mRNA_S-dermatodea_contig12856.1745.1 vs. uniprot
Match: I2CSG2_NANGC (E1 ubiquitin-activating enzyme n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CSG2_NANGC) HSP 1 Score: 257 bits (657), Expect = 5.730e-76 Identity = 130/227 (57.27%), Postives = 174/227 (76.65%), Query Frame = 1
Query: 19 AALDSMSVPEFKPADGVKIATTEAEAKEQGAGGG--GGHLE---DVDTQCERMLKELPQPADMKDFRLQVVDFDKDLDDHMEFVTAASNLRARVYKIPEADMHRSRQIAGKIIPAIATTTALVTGLVCMEVYKILQEMPLESYKNWFLNLALPQFSCSEPLPPAKTTTMIKGNEWKWSAWDSLELEQADITLQGLFERMKEEYGLEVTMLSHGVSILYSFFANKKKI 684
AAL+++ VP+F P DGVKIA T+ EAK+Q GG GG + D++ +CE ++ LP P+ + F LQ +DFDKD+D HM VTA SNLRA YKIPEADMH++RQIAGKIIPAIATTTALVTGLVC+E+YK++ + P+E +K+ F+NLALP F+ SEP PPA T ++KG EWKWSAWD +++E D+TL+ + M+E++GLEV+MLSHGVS+L+S ++K I
Sbjct: 769 AALENVMVPDFSPQDGVKIAVTDTEAKQQAEQGGSDGGAVTSSLDLEARCEAIIASLPPPSALTGFTLQPIDFDKDVDAHMAVVTATSNLRAANYKIPEADMHKTRQIAGKIIPAIATTTALVTGLVCLELYKLVLKKPIEDFKSAFVNLALPLFTFSEPQPPASQTAVVKGEEWKWSAWDRIDIE-GDLTLREFLKYMEEQFGLEVSMLSHGVSLLHSSLTSRKNI 994
BLAST of mRNA_S-dermatodea_contig12856.1745.1 vs. uniprot
Match: H3G877_PHYRM (E1 ubiquitin-activating enzyme n=33 Tax=Phytophthora TaxID=4783 RepID=H3G877_PHYRM) HSP 1 Score: 256 bits (655), Expect = 9.770e-76 Identity = 129/227 (56.83%), Postives = 167/227 (73.57%), Query Frame = 1
Query: 1 DEAVYVAALDSMSVPEFKPADGVKIATTEAEAKEQGAGGGGGHLEDVDTQCERMLKELPQPADMKDFRLQVVDFDKDLDDHMEFVTAASNLRARVYKIPEADMHRSRQIAGKIIPAIATTTALVTGLVCMEVYKILQEMPLESYKNWFLNLALPQFSCSEPLPPAKTTTMIKGNEWKWSAWDSLELEQADITLQGLFERMKEEYGLEVTMLSHGVSILYSFFANKKK 681
D + L S+ VPEF P GVKIA ++AE KE GA G LEDVD QCE +LKELP+P+ + +R+Q ++FDKD D HME + + SNLRAR YKIPE DMH+SR IAGKIIPAIATTTALVTGLVC E K+ QE PL+ YKN F+NLALP F+ +EP+ P T TM+KG E+KW+AWD LE+++ D+TL+ ++EY EV+MLS+GV+ILY+ ++ K +
Sbjct: 756 DRDSFAQVLASIHVPEFSPRKGVKIAASDAELKEGGAAPG---LEDVDAQCEFILKELPKPSTLAGYRMQAIEFDKDDDAHMEVIVSVSNLRARSYKIPEEDMHKSRFIAGKIIPAIATTTALVTGLVCFEFLKVFQEKPLDHYKNGFVNLALPLFTFAEPIEPKATKTMLKGEEYKWTAWDRLEVDRGDMTLKEFLAYFEKEYDAEVSMLSYGVTILYAMYSQKSR 979 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig12856.1745.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig12856.1745.1 >prot_S-dermatodea_contig12856.1745.1 ID=prot_S-dermatodea_contig12856.1745.1|Name=mRNA_S-dermatodea_contig12856.1745.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=235bp DEAVYVAALDSMSVPEFKPADGVKIATTEAEAKEQGAGGGGGHLEDVDTQback to top mRNA from alignment at S-dermatodea_contig12856:342..4047- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig12856.1745.1 ID=mRNA_S-dermatodea_contig12856.1745.1|Name=mRNA_S-dermatodea_contig12856.1745.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=3706bp|location=Sequence derived from alignment at S-dermatodea_contig12856:342..4047- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig12856:342..4047- >mRNA_S-dermatodea_contig12856.1745.1 ID=mRNA_S-dermatodea_contig12856.1745.1|Name=mRNA_S-dermatodea_contig12856.1745.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1410bp|location=Sequence derived from alignment at S-dermatodea_contig12856:342..4047- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |