prot_S-dermatodea_contig9393.17433.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig9393.17433.1
Unique Nameprot_S-dermatodea_contig9393.17433.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length248
Homology
BLAST of mRNA_S-dermatodea_contig9393.17433.1 vs. uniprot
Match: D7FPD0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPD0_ECTSI)

HSP 1 Score: 162 bits (411), Expect = 2.550e-46
Identity = 86/185 (46.49%), Postives = 113/185 (61.08%), Query Frame = 0
Query:   16 PTPCSCRGIFWITAGLSWVVWVFAVAAAGDENWGETSGGTGFGVRTGFLDDNCASTIANESACVAYEFFVASQTMATFLCSVAVILLTVACCRPYEATHGSAQVLGLVGGVFMMLYAFFQMAAFLFFEEFTNEHNEEWSSGFNDMSLGPTYGVGVVAFLFGLINAIMVFVLYRQAGDGPLLAVVK 200
            P   +CR ++W   G  WVVWV    AAGDENWGE   G G+GV TGF    C     N+S C A+  F A+Q  AT +CSVAV+L TV+  RP +A +GS++ LGLVGGVFM L+ F QM + LF  +   E+N      F   + G TYG+G+ AF+FGLI  I+V   + QA +GPLL+  +
Sbjct:   17 PVHPTCRKVYWFGCGFGWVVWVLTTPAAGDENWGELPAGDGYGVATGFA---CDEGDVNDSFCTAHRNFAAAQKAATVMCSVAVLLFTVSFFRPSQARYGSSKGLGLVGGVFMALFTFCQMVSILFLVKSIQEYNRYGGDAFMAKT-GDTYGLGITAFVFGLIQVIIVLGFFGQAANGPLLSCTR 197          
BLAST of mRNA_S-dermatodea_contig9393.17433.1 vs. uniprot
Match: A0A6H5KLK4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLK4_9PHAE)

HSP 1 Score: 106 bits (264), Expect = 3.080e-25
Identity = 60/128 (46.88%), Postives = 81/128 (63.28%), Query Frame = 0
Query:   77 ACVAYEFFVASQTMATFLCSVAVILLTVACCRPYEATHGSAQVLGLVGGVFMMLYAFFQMAAFLFFEEFTNEHNEEWSSGFNDMSLGPTYGVGVVAFLFGLINAIMVFVLYRQAGDGPLLAVVKGTTA 204
            A VA   F A+Q  AT +CSVAV+L TV+  RP  A HGS++  GLVGGVFM L+ FFQM + LF  +   E+N  +  G  +   G TYG+G+ AF+FGLI  I+V   + QA +GPLL+  +  +A
Sbjct:    2 ATVADRKFAAAQKAATVMCSVAVLLFTVSFFRPSHARHGSSKGFGLVGGVFMALFTFFQMVSILFLVKSIQEYNR-YGGGAFEAKTGDTYGLGMTAFVFGLIQVIIVLGFFGQAANGPLLSCTRRISA 128          
BLAST of mRNA_S-dermatodea_contig9393.17433.1 vs. uniprot
Match: D7FWH1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWH1_ECTSI)

HSP 1 Score: 63.9 bits (154), Expect = 1.460e-8
Identity = 50/175 (28.57%), Postives = 80/175 (45.71%), Query Frame = 0
Query:   24 IFWITAGLSWVVWVFAVAAAGDENWGETSGGTGFGVRTGFLDDNCASTIANESACVAYEFFVASQTMATFLCSVAVILLTVACCRPYEATHGSAQVLGLVGGVFMMLYAFFQMAAFLFFEEFTNEHNEEWSSGFNDMSLGPTYGVGVVAFLFGLINAIMVFVLYRQAG---DGPL 195
            ++W     + + W+FAVAAA D+ W +  G          L + C  +    S C  Y+   A Q  A  + S  V+++ VA  +P  AT      LG   G  +++++  Q+AAF          N + +  +  +  GPT GV V+A++FGL     + +L   A    DGPL
Sbjct:   48 VYWAVCFATAITWLFAVAAASDDAWLQFEG-----YPLLKLGERCEFSA---SFCDYYKTGTAFQFFAAIVISATVVVMIVAAFKPAPATGR----LGAAAGTMLLVFSVLQLAAFSIMAASAGRLNRD-NDNYFQIKAGPTIGVAVIAWVFGLAGGSAILLLRPHATPGQDGPL 209          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig9393.17433.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FPD0_ECTSI2.550e-4646.49Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KLK4_9PHAE3.080e-2546.88Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FWH1_ECTSI1.460e-828.57Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..22
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 188..247
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 90..107
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 23..43
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 162..187
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 119..142
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 44..89
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 143..161
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 108..118
NoneNo IPR availableTMHMMTMhelixcoord: 21..43
NoneNo IPR availableTMHMMTMhelixcoord: 165..187
NoneNo IPR availableTMHMMTMhelixcoord: 119..141
NoneNo IPR availableTMHMMTMhelixcoord: 84..106

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig9393contigS-dermatodea_contig9393:4662..7076 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig9393.17433.1mRNA_S-dermatodea_contig9393.17433.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig9393 4645..8272 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig9393.17433.1 ID=prot_S-dermatodea_contig9393.17433.1|Name=mRNA_S-dermatodea_contig9393.17433.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=248bp
MPPIMPHSGVVTHGAPTPCSCRGIFWITAGLSWVVWVFAVAAAGDENWGE
TSGGTGFGVRTGFLDDNCASTIANESACVAYEFFVASQTMATFLCSVAVI
LLTVACCRPYEATHGSAQVLGLVGGVFMMLYAFFQMAAFLFFEEFTNEHN
EEWSSGFNDMSLGPTYGVGVVAFLFGLINAIMVFVLYRQAGDGPLLAVVK
GTTAGGARAPHSGIQQQESVDLPAATGHGGPSQAVAPPYGRVGGGNV*
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