prot_S-dermatodea_contig9377.17413.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig9377.17413.1
Unique Nameprot_S-dermatodea_contig9377.17413.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length229
Homology
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BLAST of mRNA_S-dermatodea_contig9377.17413.1 vs. uniprot
Match: A0A6H5K2U9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2U9_9PHAE)

HSP 1 Score: 145 bits (367), Expect = 1.050e-38
Identity = 73/139 (52.52%), Postives = 96/139 (69.06%), Query Frame = 0 
Query:    9 NATIRVDHISKRASLVDVAKMVLDCGEDQAKAALNKLLGPTADADEDCPRLQVNNRGGFTQVANVDFLIEIIWLLPGAIPDDVRREMCHAVCRLCEGDASLVTDTEARHIAMREASLRAHAQGGEKD---DMPAGFELL 144
            +A IRVD  S + S+ DVAK+VL C +++A+ A+ KLLG T+D D D  R+Q+NNRG  T VA V+ L+EI+WLLPG I DDVRR++ H VC+   GD  LV ++E RHIAMREASL A+A     D   D+P G+  L
Sbjct:    2 DAVIRVDRASNKGSVTDVAKLVLKCDDEEAEKAVRKLLGATSDTDRDFLRVQINNRGRLTLVAGVNMLVEIVWLLPGVIADDVRRDISHKVCKALGGDTRLVEESETRHIAMREASLHANASKVATDQSRDIPPGYSFL 140
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BLAST of mRNA_S-dermatodea_contig9377.17413.1 vs. uniprot
Match: D8LP49_ECTSI (EsV-1-210/211 paralog n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP49_ECTSI)

HSP 1 Score: 139 bits (351), Expect = 2.220e-36
Identity = 82/231 (35.50%), Postives = 124/231 (53.68%), Query Frame = 0 
Query:    6 SLDNATIRVDHISKRASLVDVAKMVLDCGEDQAKAALNKLLGPTADADEDCPRLQVNNRGGFTQVANVDFLIEIIWLLPGAIPDDVRREMCHAVCRLCEGDASLVTDTEARHIAMREASLRAHAQ-----GGEK-----DDMPAGFELLGVQDQQELAKEMVRQFLKGGDQDLRRKALELEERKISLKRKRCDTVIYMYRSLEELDITLDSRAQVHILDTIAQITKPDGSE 226
            S+D ATIR D  +K+ S++D  +MVL C    A  A  +LL    +    C R ++N +G  T VA+   LIEI+WLLPG      RR+    VCRL  GD SLV++ EARH  ++        Q     G E+     D MPAGF+ L   D+ ++AK M+ Q LK GDQ              +LKRKR D +++ YR+++++ + LD R  + + D++  +++ +  E
Sbjct:    6 SMDGATIRADKQTKKGSVMDTIRMVLRCDSSNANTAFGRLLQAHPELGSRCTRSKLNGKGNETPVADAKTLIEIVWLLPGKKAHSFRRQSSEKVCRLLGGDLSLVSEIEARHATLQSTEQGRETQEFLLHGREEAVETFDGMPAGFKYLSETDRAQVAKRMIDQQLKAGDQ--------------ALKRKRVDDLVHSYRAIQDIGVRLDGRTLIELRDSVTILSRQNTVE 222
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig9377.17413.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K2U9_9PHAE1.050e-3852.52Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LP49_ECTSI2.220e-3635.50EsV-1-210/211 paralog n=1 Tax=Ectocarpus siliculos... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 165..185

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig9377contigS-dermatodea_contig9377:781..1467 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig9377.17413.1mRNA_S-dermatodea_contig9377.17413.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig9377 781..1467 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig9377.17413.1 ID=prot_S-dermatodea_contig9377.17413.1|Name=mRNA_S-dermatodea_contig9377.17413.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=229bp
MATATSLDNATIRVDHISKRASLVDVAKMVLDCGEDQAKAALNKLLGPTA
DADEDCPRLQVNNRGGFTQVANVDFLIEIIWLLPGAIPDDVRREMCHAVC
RLCEGDASLVTDTEARHIAMREASLRAHAQGGEKDDMPAGFELLGVQDQQ
ELAKEMVRQFLKGGDQDLRRKALELEERKISLKRKRCDTVIYMYRSLEEL
DITLDSRAQVHILDTIAQITKPDGSEVV*
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