prot_S-dermatodea_contig12845.1735.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig12845.1735.1
Unique Nameprot_S-dermatodea_contig12845.1735.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length118
Homology
[Close]
BLAST of mRNA_S-dermatodea_contig12845.1735.1 vs. uniprot
Match: A0A6H5KLH0_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KLH0_9PHAE)

HSP 1 Score: 135 bits (341), Expect = 2.290e-37
Identity = 76/126 (60.32%), Postives = 87/126 (69.05%), Query Frame = 0 
Query:    1 MDTFRVHDKT------APDSVSFMFVFNSGEEAQAALDVTHTRRPTSAGSSARSGTGAGSLPDG---GEERVKMTLGGMNVPHMSGEPHSCHIRQVGTVTFNPRKQARSYLYILSQEGRTLFTSLT 117
            M+ FRVH K       AP   +FMFVF+ G+  QA L+VTHT  P    +  ++G G G  PD    GE RV MTLGG NVPH  GEP+SC+IRQVG VTFNPRKQAR YLYILSQEGRTLFTSL+
Sbjct:  129 MEAFRVHTKNQTVAAGAPTPTTFMFVFHGGQPNQATLEVTHTP-PCLTPARGKAGDGGGEEPDPTSEGEGRVTMTLGGNNVPHRPGEPYSCYIRQVGHVTFNPRKQARGYLYILSQEGRTLFTSLS 253
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig12845.1735.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KLH0_9PHAE2.290e-3760.32Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig12845contigS-dermatodea_contig12845:85..1186 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig12845.1735.1mRNA_S-dermatodea_contig12845.1735.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig12845 64..1186 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig12845.1735.1 ID=prot_S-dermatodea_contig12845.1735.1|Name=mRNA_S-dermatodea_contig12845.1735.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=118bp
MDTFRVHDKTAPDSVSFMFVFNSGEEAQAALDVTHTRRPTSAGSSARSGT
GAGSLPDGGEERVKMTLGGMNVPHMSGEPHSCHIRQVGTVTFNPRKQARS
YLYILSQEGRTLFTSLT*
back to top