mRNA_S-dermatodea_contig9247.17304.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig9247.17304.1 vs. uniprot
Match: A0A6H5L555_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L555_9PHAE) HSP 1 Score: 412 bits (1060), Expect = 4.960e-142 Identity = 233/301 (77.41%), Postives = 255/301 (84.72%), Query Frame = 1
Query: 79 PRLDRPSAAAVAAVXXXXXXXXANSAARGFVAHRKRAGGRSGPV--NLFERVGARGVLAMRLLSDVAAAAVASLMVSPFISIVDRAIIQSASGTMGMQASVSQGMRVLTTKPALFLARPDFICTFCLYGATYLAANAITTIAEEMRRSDALPKFLGTTAINMPGSIAKDQALTKLFGVVGGAARVPAASFALFTVRDVATMAAAFTLPTPMSAKMQEEFGVGSGMADGVSQLVSPGLVQLFSTPVHILGLDLYNHPSSSPAARLRVVQSSFVPAIIMRVCRIGVAFGVGGLGNTAIRKNLH 975
PRL+ P A A XXXXX +AARGF+A R + N+ ER+GARGVLA RL+SD AAA++ASLMVSPFISIVDRAIIQSASG+MGM+ASV+QG RVL TKPALFLARPDFICTFCLYGATYLAAN I+T+A+E RSD +PKFLGTTAINMPGSIAKDQALTK+FGVVG AA+VPAASFALFTVRDVATMAAAFTLPTPMSA+MQE FGV SGMAD SQLVSPGLVQ+FSTPVHILGLDLYNHP SS ARLRVVQ SF+PAI MRV RIGVAFGVGGLGNT+IR LH
Sbjct: 5 PRLEGPGATRTAVAVXXXXXGA--TAARGFLAARDGSXXXXXXXXGNILERLGARGVLAARLVSDFAAASMASLMVSPFISIVDRAIIQSASGSMGMKASVAQGFRVLATKPALFLARPDFICTFCLYGATYLAANTISTMADEYSRSDTMPKFLGTTAINMPGSIAKDQALTKIFGVVGSAAKVPAASFALFTVRDVATMAAAFTLPTPMSARMQESFGVDSGMADVTSQLVSPGLVQVFSTPVHILGLDLYNHPRSSCRARLRVVQDSFMPAIAMRVARIGVAFGVGGLGNTSIRNMLH 303
BLAST of mRNA_S-dermatodea_contig9247.17304.1 vs. uniprot
Match: D8LGM5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGM5_ECTSI) HSP 1 Score: 365 bits (936), Expect = 4.490e-123 Identity = 204/275 (74.18%), Postives = 223/275 (81.09%), Query Frame = 1
Query: 151 SAARGFVAHRKRAGGRSGPVNLFERVGARGVLAMRLLSDVAAAAVASLMVSPFISIVDRAIIQSASGTMGMQASVSQGMRVLTTKPALFLARPDFICTFCLYGATYLAANAITTIAEEMRRSDALPKFLGTTAINMPGSIAKDQALTKLFGVVGGAARVPAASFALFTVRDVATMAAAFTLPTPMSAKMQEEFGVGSGMADGVSQLVSPGLVQLFSTPVHILGLDLYNHPSSSPAARLRVVQSSFVPAIIMRVCRIGVAFGVGGLGNTAIRKNLH 975
+AARGF+A R + G G NL ER+GARGVLA RL+SD AAA++ASLMVSPFISIVDRAIIQSASG+MGM+ASV+QG RVL TKPALFLARPDFICTFCLYGATYLAAN I+T+A+E RSD +PKFLGTTAINMPGSIAKDQALTK+FGVVG AA+VPAASFALFTVRDVATMAAAFTLPTPMS KMQ+ FGV SGMAD SQLVSPGLVQLFSTP SF+PAI MRV RIGVAFGVGGLGNT+IR LH
Sbjct: 62 TAARGFLAARDGSAGGVGVGNLLERLGARGVLAARLVSDFAAASMASLMVSPFISIVDRAIIQSASGSMGMKASVAQGFRVLATKPALFLARPDFICTFCLYGATYLAANTISTMADEFSRSDTMPKFLGTTAINMPGSIAKDQALTKIFGVVGSAAKVPAASFALFTVRDVATMAAAFTLPTPMSTKMQD-FGVDSGMADVTSQLVSPGLVQLFSTP------------------------DSFMPAIAMRVARIGVAFGVGGLGNTSIRNKLH 311
BLAST of mRNA_S-dermatodea_contig9247.17304.1 vs. uniprot
Match: A0A835Z5G8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5G8_9STRA) HSP 1 Score: 209 bits (531), Expect = 1.850e-62 Identity = 111/236 (47.03%), Postives = 156/236 (66.10%), Query Frame = 1
Query: 265 DVAAAAVASLMVSPFISIVDRAIIQSASGTMGMQASVSQGMRVLTTKPALFLARPDFICTFCLYGATYLAANAITTIAEEMRRSDALPKFLGTTAINMPGSIAKDQALTKLFGVVGGAARVPAASFALFTVRDVATMAAAFTLPTPMSAKMQEEFGVGSGMADGVSQLVSPGLVQLFSTPVHILGLDLYNHPSSSPAARLRVVQSSFVPAIIMRVCRIGVAFGVGGLGNTAIRKNL 972
DV +A AS MVSPFI+IVDR+IIQ+ASG M M S+ G++ L +P +FL RP+F+ F +Y ATY ANA+ T E + A P+FL T+A+NM IAKD+A T++FG A +P +++ALFT+RD T+ A+F LP P+S +Q + G+ AD +Q+ P VQ STP+H++GLDLYN+P S+ R + S + ++ R+ RIG AFG+GG+GNTA RK L
Sbjct: 40 DVLSAFGASFMVSPFITIVDRSIIQNASGVMQMGDSIRAGIKELVMRPHVFLRRPEFLMIFGVYSATYTTANAVNTTCEHRKVDSAWPRFLSTSAVNMTSCIAKDRAFTRMFGSSAPMA-LPLSTYALFTIRDAGTVGASFNLPGPVSEWLQAQ-GMSKARADFTAQMACPAAVQFLSTPLHLIGLDLYNNPKSTARDRWTFMCSKYTSSVAARIGRIGPAFGIGGVGNTAFRKGL 273
BLAST of mRNA_S-dermatodea_contig9247.17304.1 vs. uniprot
Match: A0A5D6XW10_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XW10_9STRA) HSP 1 Score: 204 bits (520), Expect = 5.590e-61 Identity = 112/245 (45.71%), Postives = 155/245 (63.27%), Query Frame = 1
Query: 238 GVLAMRLLSDVAAAAVASLMVSPFISIVDRAIIQSASGTMGMQASVSQGMRVLTTKPALFLARPDFICTFCLYGATYLAANAITTIAEEMRRSDALPKFLGTTAINMPGSIAKDQALTKLFGVVGGAARVPAASFALFTVRDVATMAAAFTLPTPMSAKMQEEFGVGSGMADGVSQLVSPGLVQLFSTPVHILGLDLYNHPSSSPAARLRVVQSSFVPAIIMRVCRIGVAFGVGGLGNTAIRKNL 972
G+L RL +DV AAA AS V+PFI+IVDRAII++ASG + + + R +P F+ +F F LY ATY +ANA ++ + R +PKF TTA+NM IAKD+A ++FGVV +A P A+ LF VRD T+AA+F P ++ K+Q++ GV A +QL+ P LVQ STP+H+LGLDLYNH + AA LRVV+ ++ + I R+ RIG AFG+GG+GN R+ L
Sbjct: 18 GLLTRRLAADVTAAATASFAVAPFITIVDRAIIENASGARPLGVGIRELARAFARRPLAFVRTREFAIVFGLYTATYASANATDSLCDFAERDSQMPKFAATTAVNMSLCIAKDRAFAQMFGVVAPSA-FPLAAVGLFAVRDSLTVAASFNAPKAVARKLQDDTGVDPARARTAAQLLCPALVQFVSTPLHLLGLDLYNHKGAGAAAHLRVVRREYLKSAIARIGRIGPAFGIGGIGNAHCRETL 261
BLAST of mRNA_S-dermatodea_contig9247.17304.1 vs. uniprot
Match: K3WSU5_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WSU5_GLOUD) HSP 1 Score: 204 bits (519), Expect = 6.780e-61 Identity = 111/244 (45.49%), Postives = 157/244 (64.34%), Query Frame = 1
Query: 241 VLAMRLLSDVAAAAVASLMVSPFISIVDRAIIQSASGTMGMQASVSQGMRVLTTKPALFLARPDFICTFCLYGATYLAANAITTIAEEMRRSDALPKFLGTTAINMPGSIAKDQALTKLFGVVGGAARVPAASFALFTVRDVATMAAAFTLPTPMSAKMQEEFGVGSGMADGVSQLVSPGLVQLFSTPVHILGLDLYNHPSSSPAARLRVVQSSFVPAIIMRVCRIGVAFGVGGLGNTAIRKNL 972
V+A L D+AAAA AS VSPFI+IVDRAII++ASG + + + + P F+ + +FI F LY +TY +ANAI T+ E + +PKFLGTTA+NM IAKD+A ++FGVV +A P + LF +RD T+ A+F P ++ K++ + GV A ++QL+ P VQ STP+H+LGLDLYN+ +S AAR R VQ ++ + + R+ RIG AFG+GG+GNT R+NL
Sbjct: 16 VVAKNLAIDLAAAAAASFAVSPFITIVDRAIIENASGARPLAVGIKELSKAFVANPFQFVRKREFIIVFGLYTSTYASANAIDTVCEWAEADNQMPKFLGTTAVNMTLCIAKDRAFAQMFGVVAPSA-FPIGAIGLFAIRDSLTVGASFNAPKTVAKKLEVDGGVEPSRAKTLAQLLCPAAVQFVSTPLHLLGLDLYNNKGASVAARFRFVQREYLKSAVARIGRIGPAFGIGGVGNTYCRENL 258
BLAST of mRNA_S-dermatodea_contig9247.17304.1 vs. uniprot
Match: A0A8K1CT18_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CT18_PYTOL) HSP 1 Score: 204 bits (519), Expect = 6.780e-61 Identity = 116/240 (48.33%), Postives = 155/240 (64.58%), Query Frame = 1
Query: 253 RLLSDVAAAAVASLMVSPFISIVDRAIIQSASGTMGMQASVSQGMRVLTTKPALFLARPDFICTFCLYGATYLAANAITTIAEEMRRSDALPKFLGTTAINMPGSIAKDQALTKLFGVVGGAARVPAASFALFTVRDVATMAAAFTLPTPMSAKMQEEFGVGSGMADGVSQLVSPGLVQLFSTPVHILGLDLYNHPSSSPAARLRVVQSSFVPAIIMRVCRIGVAFGVGGLGNTAIRKNL 972
RL DVAAAA ASL VSPFI+IVDRAII++ASG + V Q P FL R +F F LY ATY +AN+I T+ + + +PKF+GTTA+NM IAKD+A T++FGV+ AA P AS LF +RD T+AA+F P M+ ++QE+ V + +SQLV P VQ STP+H++GLDLYNH +S + RL VQ ++ ++ R+ RIG AFG+GG+GNT R+ L
Sbjct: 19 RLGVDVAAAATASLGVSPFIAIVDRAIIENASGARRLSDGVKQLSMEFLRHPLRFLHRREFRLVFGLYTATYASANSIETLCDATDTDNQMPKFVGTTAVNMTLCIAKDRAFTQMFGVIAPAA-FPLASVGLFAIRDSMTVAASFNAPKIMAQQLQEKAHVKPSTSATISQLVCPAAVQFVSTPLHLVGLDLYNHKGASMSQRLVFVQREYIKSVFARIARIGPAFGIGGVGNTYCRQRL 257
BLAST of mRNA_S-dermatodea_contig9247.17304.1 vs. uniprot
Match: A0A662XCZ4_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XCZ4_9STRA) HSP 1 Score: 199 bits (506), Expect = 5.880e-59 Identity = 113/250 (45.20%), Postives = 159/250 (63.60%), Query Frame = 1
Query: 229 GARGV--LAMRLLSDVAAAAVASLMVSPFISIVDRAIIQSASGTMGMQASVSQGMRVLTTKPALFLARPDFICTFCLYGATYLAANAITTIAEEMRRSDALPKFLGTTAINMPGSIAKDQALTKLFGVVGGAARVPAASFALFTVRDVATMAAAFTLPTPMSAKMQEEFGVGSGMADGVSQLVSPGLVQLFSTPVHILGLDLYNHPSSSPAARLRVVQSSFVPAIIMRVCRIGVAFGVGGLGNTAIRKNL 972
G+RG LA RL D+AAA AS+ V+PFI+IVDRAII++ASG + + Q P F+ + +F+ F LY ATY++ANAI T+ E + + +PKF+GTTA+NM IAKD+A ++FGV+ AA P AS LF VRD T+AA+F P ++ K++++ + A ++QLV P VQ STP+H+LGLDLYN+ S A R VQ ++ ++ R+ RIG AFG+GG+GNT R L
Sbjct: 9 GSRGASALAKRLGIDLAAAMAASVSVAPFITIVDRAIIENASGARPLGVGLKQLAADFVRHPLRFVVKREFLLIFGLYSATYVSANAIDTMCEFAEKDNQMPKFIGTTAVNMSLCIAKDRAFARMFGVIAPAA-FPLASIGLFAVRDSLTVAASFNAPKFLAKKLEDDAKMQPSRAGTIAQLVCPAAVQFISTPLHLLGLDLYNNKGLSAAKRASFVQREYLKSVFARIGRIGPAFGIGGVGNTYFRDQL 257
BLAST of mRNA_S-dermatodea_contig9247.17304.1 vs. uniprot
Match: A0A2D4BK36_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BK36_PYTIN) HSP 1 Score: 194 bits (494), Expect = 3.930e-57 Identity = 111/242 (45.87%), Postives = 154/242 (63.64%), Query Frame = 1
Query: 247 AMRLLSDVAAAAVASLMVSPFISIVDRAIIQSASGTMGMQASVSQGMRVLTTKPALFLARPDFICTFCLYGATYLAANAITTIAEEMRRSDALPKFLGTTAINMPGSIAKDQALTKLFGVVGGAARVPAASFALFTVRDVATMAAAFTLPTPMSAKMQEEFGVGSGMADGVSQLVSPGLVQLFSTPVHILGLDLYNHPSSSPAARLRVVQSSFVPAIIMRVCRIGVAFGVGGLGNTAIRKNL 972
A RL D AAA +ASL VSPFI+IVDR+II++ASG + + + P FL R +F F LY ATY +ANAI T+ + + +PKF+GTTA+NM IAKD+A T++FGV+ AA P AS LF VRD T+AA+F P ++ +++E + A V+QL+ P +VQ STP+H+LGLDLYNH ++ R+ VQ ++ + + R+ RIG AFGVGG+GNT R+ L
Sbjct: 18 AKRLGVDAAAAMIASLGVSPFITIVDRSIIENASGARQLTTGLKELSIDFLRHPLQFLRRREFRLVFGLYTATYASANAIDTLCDVTDTNSQMPKFVGTTAVNMTLCIAKDRAFTQMFGVIAPAA-FPLASIGLFAVRDALTVAASFNAPRVVAKELRERAQLEPSRASTVAQLLCPAVVQFVSTPLHLLGLDLYNHRTAMVRQRINFVQREYLKSAVARIGRIGPAFGVGGVGNTFCRERL 258
BLAST of mRNA_S-dermatodea_contig9247.17304.1 vs. uniprot
Match: G4ZUB7_PHYSP (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=G4ZUB7_PHYSP) HSP 1 Score: 186 bits (472), Expect = 7.740e-54 Identity = 104/243 (42.80%), Postives = 149/243 (61.32%), Query Frame = 1
Query: 244 LAMRLLSDVAAAAVASLMVSPFISIVDRAIIQSASGTMGMQASVSQGMRVLTTKPALFLARPDFICTFCLYGATYLAANAITTIAEEMRRSDALPKFLGTTAINMPGSIAKDQALTKLFGVVGGAARVPAASFALFTVRDVATMAAAFTLPTPMSAKMQEEFGVGSGMADGVSQLVSPGLVQLFSTPVHILGLDLYNHPSSSPAARLRVVQSSFVPAIIMRVCRIGVAFGVGGLGNTAIRKNL 972
LA +L++D AA ASL V+PFI+IVDRAII++ASG + + + P F+ + +F F LY ATY+ AN + ++ E + +PKF+GTTA+NM IAKD+A ++FGV+ AA P S LF VRD T A+F P ++ K+++ + G A +QLV P VQ STP+H++GLDLYN+ + A R+ VQ +V ++ RV RIG AFG+GG+GNT R +L
Sbjct: 18 LAKQLVADTVAAMAASLGVAPFITIVDRAIIENASGARPLGRGLKELSVEFLKHPLRFVGKREFHLIFGLYTATYVTANVVDSVCEYAEADNQMPKFIGTTAVNMSLCIAKDRAFARMFGVIAPAA-FPLTSIGLFAVRDSMTCGASFNAPKVLAKKIEDNGLMEKGNASTFAQLVCPAAVQFLSTPLHLMGLDLYNNKGHAMAQRVSFVQREYVKSVFARVGRIGPAFGIGGVGNTYFRNSL 259
BLAST of mRNA_S-dermatodea_contig9247.17304.1 vs. uniprot
Match: A0A3M6VQY3_9STRA (Uncharacterized protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VQY3_9STRA) HSP 1 Score: 184 bits (468), Expect = 2.980e-53 Identity = 103/241 (42.74%), Postives = 148/241 (61.41%), Query Frame = 1
Query: 244 LAMRLLSDVAAAAVASLMVSPFISIVDRAIIQSASGTMGMQASVSQGMRVLTTKPALFLARPDFICTFCLYGATYLAANAITTIAEEMRRSDALPKFLGTTAINMPGSIAKDQALTKLFGVVGGAARVPAASFALFTVRDVATMAAAFTLPTPMSAKMQEEFGVGSGMADGVSQLVSPGLVQLFSTPVHILGLDLYNHPSSSPAARLRVVQSSFVPAIIMRVCRIGVAFGVGGLGNTAIRK 966
L +L+ D AAA ASL V+PFI+IVDRAII++ASG + + + P F+ + +F F LY ATY+AANA+ ++ E + + +PKF+GTTA+NM IAKD+A ++FGV+ AA P AS LF VRD T AA+F P ++ K+++ + A +QL+ P VQ STP+H+LGLDLYN+ + +V+ +V +++ RV RIG AFGVGG+GN R
Sbjct: 17 LVKQLMVDTAAAMAASLGVAPFITIVDRAIIENASGARPLGRGIKELSISFLKNPLRFVGKREFHIVFGLYTATYMAANAVDSVCEYIETDNQMPKFIGTTAVNMSLCIAKDRAFARMFGVIAPAA-FPLASIGLFAVRDSMTCAASFNAPKVLAKKIEDNKLMDKSNAGTFAQLICPAAVQFISTPLHLLGLDLYNNKGHTMTQHASLVRREYVKSVLARVGRIGPAFGVGGVGNAYFRN 256 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig9247.17304.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig9247.17304.1 >prot_S-dermatodea_contig9247.17304.1 ID=prot_S-dermatodea_contig9247.17304.1|Name=mRNA_S-dermatodea_contig9247.17304.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=325bp PPSPPSSPRSTLVNARRALRLPIRNAPRLDRPSAAAVAAVASAAATATANback to top mRNA from alignment at S-dermatodea_contig9247:350..2289+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig9247.17304.1 ID=mRNA_S-dermatodea_contig9247.17304.1|Name=mRNA_S-dermatodea_contig9247.17304.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=1940bp|location=Sequence derived from alignment at S-dermatodea_contig9247:350..2289+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig9247:350..2289+ >mRNA_S-dermatodea_contig9247.17304.1 ID=mRNA_S-dermatodea_contig9247.17304.1|Name=mRNA_S-dermatodea_contig9247.17304.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1950bp|location=Sequence derived from alignment at S-dermatodea_contig9247:350..2289+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |