mRNA_S-dermatodea_contig9247.17304.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig9247.17304.1
Unique NamemRNA_S-dermatodea_contig9247.17304.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
BLAST of mRNA_S-dermatodea_contig9247.17304.1 vs. uniprot
Match: A0A6H5L555_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L555_9PHAE)

HSP 1 Score: 412 bits (1060), Expect = 4.960e-142
Identity = 233/301 (77.41%), Postives = 255/301 (84.72%), Query Frame = 1
Query:   79 PRLDRPSAAAVAAVXXXXXXXXANSAARGFVAHRKRAGGRSGPV--NLFERVGARGVLAMRLLSDVAAAAVASLMVSPFISIVDRAIIQSASGTMGMQASVSQGMRVLTTKPALFLARPDFICTFCLYGATYLAANAITTIAEEMRRSDALPKFLGTTAINMPGSIAKDQALTKLFGVVGGAARVPAASFALFTVRDVATMAAAFTLPTPMSAKMQEEFGVGSGMADGVSQLVSPGLVQLFSTPVHILGLDLYNHPSSSPAARLRVVQSSFVPAIIMRVCRIGVAFGVGGLGNTAIRKNLH 975
            PRL+ P A   A   XXXXX    +AARGF+A R  +         N+ ER+GARGVLA RL+SD AAA++ASLMVSPFISIVDRAIIQSASG+MGM+ASV+QG RVL TKPALFLARPDFICTFCLYGATYLAAN I+T+A+E  RSD +PKFLGTTAINMPGSIAKDQALTK+FGVVG AA+VPAASFALFTVRDVATMAAAFTLPTPMSA+MQE FGV SGMAD  SQLVSPGLVQ+FSTPVHILGLDLYNHP SS  ARLRVVQ SF+PAI MRV RIGVAFGVGGLGNT+IR  LH
Sbjct:    5 PRLEGPGATRTAVAVXXXXXGA--TAARGFLAARDGSXXXXXXXXGNILERLGARGVLAARLVSDFAAASMASLMVSPFISIVDRAIIQSASGSMGMKASVAQGFRVLATKPALFLARPDFICTFCLYGATYLAANTISTMADEYSRSDTMPKFLGTTAINMPGSIAKDQALTKIFGVVGSAAKVPAASFALFTVRDVATMAAAFTLPTPMSARMQESFGVDSGMADVTSQLVSPGLVQVFSTPVHILGLDLYNHPRSSCRARLRVVQDSFMPAIAMRVARIGVAFGVGGLGNTSIRNMLH 303          
BLAST of mRNA_S-dermatodea_contig9247.17304.1 vs. uniprot
Match: D8LGM5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGM5_ECTSI)

HSP 1 Score: 365 bits (936), Expect = 4.490e-123
Identity = 204/275 (74.18%), Postives = 223/275 (81.09%), Query Frame = 1
Query:  151 SAARGFVAHRKRAGGRSGPVNLFERVGARGVLAMRLLSDVAAAAVASLMVSPFISIVDRAIIQSASGTMGMQASVSQGMRVLTTKPALFLARPDFICTFCLYGATYLAANAITTIAEEMRRSDALPKFLGTTAINMPGSIAKDQALTKLFGVVGGAARVPAASFALFTVRDVATMAAAFTLPTPMSAKMQEEFGVGSGMADGVSQLVSPGLVQLFSTPVHILGLDLYNHPSSSPAARLRVVQSSFVPAIIMRVCRIGVAFGVGGLGNTAIRKNLH 975
            +AARGF+A R  + G  G  NL ER+GARGVLA RL+SD AAA++ASLMVSPFISIVDRAIIQSASG+MGM+ASV+QG RVL TKPALFLARPDFICTFCLYGATYLAAN I+T+A+E  RSD +PKFLGTTAINMPGSIAKDQALTK+FGVVG AA+VPAASFALFTVRDVATMAAAFTLPTPMS KMQ+ FGV SGMAD  SQLVSPGLVQLFSTP                         SF+PAI MRV RIGVAFGVGGLGNT+IR  LH
Sbjct:   62 TAARGFLAARDGSAGGVGVGNLLERLGARGVLAARLVSDFAAASMASLMVSPFISIVDRAIIQSASGSMGMKASVAQGFRVLATKPALFLARPDFICTFCLYGATYLAANTISTMADEFSRSDTMPKFLGTTAINMPGSIAKDQALTKIFGVVGSAAKVPAASFALFTVRDVATMAAAFTLPTPMSTKMQD-FGVDSGMADVTSQLVSPGLVQLFSTP------------------------DSFMPAIAMRVARIGVAFGVGGLGNTSIRNKLH 311          
BLAST of mRNA_S-dermatodea_contig9247.17304.1 vs. uniprot
Match: A0A835Z5G8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5G8_9STRA)

HSP 1 Score: 209 bits (531), Expect = 1.850e-62
Identity = 111/236 (47.03%), Postives = 156/236 (66.10%), Query Frame = 1
Query:  265 DVAAAAVASLMVSPFISIVDRAIIQSASGTMGMQASVSQGMRVLTTKPALFLARPDFICTFCLYGATYLAANAITTIAEEMRRSDALPKFLGTTAINMPGSIAKDQALTKLFGVVGGAARVPAASFALFTVRDVATMAAAFTLPTPMSAKMQEEFGVGSGMADGVSQLVSPGLVQLFSTPVHILGLDLYNHPSSSPAARLRVVQSSFVPAIIMRVCRIGVAFGVGGLGNTAIRKNL 972
            DV +A  AS MVSPFI+IVDR+IIQ+ASG M M  S+  G++ L  +P +FL RP+F+  F +Y ATY  ANA+ T  E  +   A P+FL T+A+NM   IAKD+A T++FG     A +P +++ALFT+RD  T+ A+F LP P+S  +Q + G+    AD  +Q+  P  VQ  STP+H++GLDLYN+P S+   R   + S +  ++  R+ RIG AFG+GG+GNTA RK L
Sbjct:   40 DVLSAFGASFMVSPFITIVDRSIIQNASGVMQMGDSIRAGIKELVMRPHVFLRRPEFLMIFGVYSATYTTANAVNTTCEHRKVDSAWPRFLSTSAVNMTSCIAKDRAFTRMFGSSAPMA-LPLSTYALFTIRDAGTVGASFNLPGPVSEWLQAQ-GMSKARADFTAQMACPAAVQFLSTPLHLIGLDLYNNPKSTARDRWTFMCSKYTSSVAARIGRIGPAFGIGGVGNTAFRKGL 273          
BLAST of mRNA_S-dermatodea_contig9247.17304.1 vs. uniprot
Match: A0A5D6XW10_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XW10_9STRA)

HSP 1 Score: 204 bits (520), Expect = 5.590e-61
Identity = 112/245 (45.71%), Postives = 155/245 (63.27%), Query Frame = 1
Query:  238 GVLAMRLLSDVAAAAVASLMVSPFISIVDRAIIQSASGTMGMQASVSQGMRVLTTKPALFLARPDFICTFCLYGATYLAANAITTIAEEMRRSDALPKFLGTTAINMPGSIAKDQALTKLFGVVGGAARVPAASFALFTVRDVATMAAAFTLPTPMSAKMQEEFGVGSGMADGVSQLVSPGLVQLFSTPVHILGLDLYNHPSSSPAARLRVVQSSFVPAIIMRVCRIGVAFGVGGLGNTAIRKNL 972
            G+L  RL +DV AAA AS  V+PFI+IVDRAII++ASG   +   + +  R    +P  F+   +F   F LY ATY +ANA  ++ +   R   +PKF  TTA+NM   IAKD+A  ++FGVV  +A  P A+  LF VRD  T+AA+F  P  ++ K+Q++ GV    A   +QL+ P LVQ  STP+H+LGLDLYNH  +  AA LRVV+  ++ + I R+ RIG AFG+GG+GN   R+ L
Sbjct:   18 GLLTRRLAADVTAAATASFAVAPFITIVDRAIIENASGARPLGVGIRELARAFARRPLAFVRTREFAIVFGLYTATYASANATDSLCDFAERDSQMPKFAATTAVNMSLCIAKDRAFAQMFGVVAPSA-FPLAAVGLFAVRDSLTVAASFNAPKAVARKLQDDTGVDPARARTAAQLLCPALVQFVSTPLHLLGLDLYNHKGAGAAAHLRVVRREYLKSAIARIGRIGPAFGIGGIGNAHCRETL 261          
BLAST of mRNA_S-dermatodea_contig9247.17304.1 vs. uniprot
Match: K3WSU5_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WSU5_GLOUD)

HSP 1 Score: 204 bits (519), Expect = 6.780e-61
Identity = 111/244 (45.49%), Postives = 157/244 (64.34%), Query Frame = 1
Query:  241 VLAMRLLSDVAAAAVASLMVSPFISIVDRAIIQSASGTMGMQASVSQGMRVLTTKPALFLARPDFICTFCLYGATYLAANAITTIAEEMRRSDALPKFLGTTAINMPGSIAKDQALTKLFGVVGGAARVPAASFALFTVRDVATMAAAFTLPTPMSAKMQEEFGVGSGMADGVSQLVSPGLVQLFSTPVHILGLDLYNHPSSSPAARLRVVQSSFVPAIIMRVCRIGVAFGVGGLGNTAIRKNL 972
            V+A  L  D+AAAA AS  VSPFI+IVDRAII++ASG   +   + +  +     P  F+ + +FI  F LY +TY +ANAI T+ E     + +PKFLGTTA+NM   IAKD+A  ++FGVV  +A  P  +  LF +RD  T+ A+F  P  ++ K++ + GV    A  ++QL+ P  VQ  STP+H+LGLDLYN+  +S AAR R VQ  ++ + + R+ RIG AFG+GG+GNT  R+NL
Sbjct:   16 VVAKNLAIDLAAAAAASFAVSPFITIVDRAIIENASGARPLAVGIKELSKAFVANPFQFVRKREFIIVFGLYTSTYASANAIDTVCEWAEADNQMPKFLGTTAVNMTLCIAKDRAFAQMFGVVAPSA-FPIGAIGLFAIRDSLTVGASFNAPKTVAKKLEVDGGVEPSRAKTLAQLLCPAAVQFVSTPLHLLGLDLYNNKGASVAARFRFVQREYLKSAVARIGRIGPAFGIGGVGNTYCRENL 258          
BLAST of mRNA_S-dermatodea_contig9247.17304.1 vs. uniprot
Match: A0A8K1CT18_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CT18_PYTOL)

HSP 1 Score: 204 bits (519), Expect = 6.780e-61
Identity = 116/240 (48.33%), Postives = 155/240 (64.58%), Query Frame = 1
Query:  253 RLLSDVAAAAVASLMVSPFISIVDRAIIQSASGTMGMQASVSQGMRVLTTKPALFLARPDFICTFCLYGATYLAANAITTIAEEMRRSDALPKFLGTTAINMPGSIAKDQALTKLFGVVGGAARVPAASFALFTVRDVATMAAAFTLPTPMSAKMQEEFGVGSGMADGVSQLVSPGLVQLFSTPVHILGLDLYNHPSSSPAARLRVVQSSFVPAIIMRVCRIGVAFGVGGLGNTAIRKNL 972
            RL  DVAAAA ASL VSPFI+IVDRAII++ASG   +   V Q        P  FL R +F   F LY ATY +AN+I T+ +     + +PKF+GTTA+NM   IAKD+A T++FGV+  AA  P AS  LF +RD  T+AA+F  P  M+ ++QE+  V    +  +SQLV P  VQ  STP+H++GLDLYNH  +S + RL  VQ  ++ ++  R+ RIG AFG+GG+GNT  R+ L
Sbjct:   19 RLGVDVAAAATASLGVSPFIAIVDRAIIENASGARRLSDGVKQLSMEFLRHPLRFLHRREFRLVFGLYTATYASANSIETLCDATDTDNQMPKFVGTTAVNMTLCIAKDRAFTQMFGVIAPAA-FPLASVGLFAIRDSMTVAASFNAPKIMAQQLQEKAHVKPSTSATISQLVCPAAVQFVSTPLHLVGLDLYNHKGASMSQRLVFVQREYIKSVFARIARIGPAFGIGGVGNTYCRQRL 257          
BLAST of mRNA_S-dermatodea_contig9247.17304.1 vs. uniprot
Match: A0A662XCZ4_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XCZ4_9STRA)

HSP 1 Score: 199 bits (506), Expect = 5.880e-59
Identity = 113/250 (45.20%), Postives = 159/250 (63.60%), Query Frame = 1
Query:  229 GARGV--LAMRLLSDVAAAAVASLMVSPFISIVDRAIIQSASGTMGMQASVSQGMRVLTTKPALFLARPDFICTFCLYGATYLAANAITTIAEEMRRSDALPKFLGTTAINMPGSIAKDQALTKLFGVVGGAARVPAASFALFTVRDVATMAAAFTLPTPMSAKMQEEFGVGSGMADGVSQLVSPGLVQLFSTPVHILGLDLYNHPSSSPAARLRVVQSSFVPAIIMRVCRIGVAFGVGGLGNTAIRKNL 972
            G+RG   LA RL  D+AAA  AS+ V+PFI+IVDRAII++ASG   +   + Q        P  F+ + +F+  F LY ATY++ANAI T+ E   + + +PKF+GTTA+NM   IAKD+A  ++FGV+  AA  P AS  LF VRD  T+AA+F  P  ++ K++++  +    A  ++QLV P  VQ  STP+H+LGLDLYN+   S A R   VQ  ++ ++  R+ RIG AFG+GG+GNT  R  L
Sbjct:    9 GSRGASALAKRLGIDLAAAMAASVSVAPFITIVDRAIIENASGARPLGVGLKQLAADFVRHPLRFVVKREFLLIFGLYSATYVSANAIDTMCEFAEKDNQMPKFIGTTAVNMSLCIAKDRAFARMFGVIAPAA-FPLASIGLFAVRDSLTVAASFNAPKFLAKKLEDDAKMQPSRAGTIAQLVCPAAVQFISTPLHLLGLDLYNNKGLSAAKRASFVQREYLKSVFARIGRIGPAFGIGGVGNTYFRDQL 257          
BLAST of mRNA_S-dermatodea_contig9247.17304.1 vs. uniprot
Match: A0A2D4BK36_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BK36_PYTIN)

HSP 1 Score: 194 bits (494), Expect = 3.930e-57
Identity = 111/242 (45.87%), Postives = 154/242 (63.64%), Query Frame = 1
Query:  247 AMRLLSDVAAAAVASLMVSPFISIVDRAIIQSASGTMGMQASVSQGMRVLTTKPALFLARPDFICTFCLYGATYLAANAITTIAEEMRRSDALPKFLGTTAINMPGSIAKDQALTKLFGVVGGAARVPAASFALFTVRDVATMAAAFTLPTPMSAKMQEEFGVGSGMADGVSQLVSPGLVQLFSTPVHILGLDLYNHPSSSPAARLRVVQSSFVPAIIMRVCRIGVAFGVGGLGNTAIRKNL 972
            A RL  D AAA +ASL VSPFI+IVDR+II++ASG   +   + +        P  FL R +F   F LY ATY +ANAI T+ +    +  +PKF+GTTA+NM   IAKD+A T++FGV+  AA  P AS  LF VRD  T+AA+F  P  ++ +++E   +    A  V+QL+ P +VQ  STP+H+LGLDLYNH ++    R+  VQ  ++ + + R+ RIG AFGVGG+GNT  R+ L
Sbjct:   18 AKRLGVDAAAAMIASLGVSPFITIVDRSIIENASGARQLTTGLKELSIDFLRHPLQFLRRREFRLVFGLYTATYASANAIDTLCDVTDTNSQMPKFVGTTAVNMTLCIAKDRAFTQMFGVIAPAA-FPLASIGLFAVRDALTVAASFNAPRVVAKELRERAQLEPSRASTVAQLLCPAVVQFVSTPLHLLGLDLYNHRTAMVRQRINFVQREYLKSAVARIGRIGPAFGVGGVGNTFCRERL 258          
BLAST of mRNA_S-dermatodea_contig9247.17304.1 vs. uniprot
Match: G4ZUB7_PHYSP (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=G4ZUB7_PHYSP)

HSP 1 Score: 186 bits (472), Expect = 7.740e-54
Identity = 104/243 (42.80%), Postives = 149/243 (61.32%), Query Frame = 1
Query:  244 LAMRLLSDVAAAAVASLMVSPFISIVDRAIIQSASGTMGMQASVSQGMRVLTTKPALFLARPDFICTFCLYGATYLAANAITTIAEEMRRSDALPKFLGTTAINMPGSIAKDQALTKLFGVVGGAARVPAASFALFTVRDVATMAAAFTLPTPMSAKMQEEFGVGSGMADGVSQLVSPGLVQLFSTPVHILGLDLYNHPSSSPAARLRVVQSSFVPAIIMRVCRIGVAFGVGGLGNTAIRKNL 972
            LA +L++D  AA  ASL V+PFI+IVDRAII++ASG   +   + +        P  F+ + +F   F LY ATY+ AN + ++ E     + +PKF+GTTA+NM   IAKD+A  ++FGV+  AA  P  S  LF VRD  T  A+F  P  ++ K+++   +  G A   +QLV P  VQ  STP+H++GLDLYN+   + A R+  VQ  +V ++  RV RIG AFG+GG+GNT  R +L
Sbjct:   18 LAKQLVADTVAAMAASLGVAPFITIVDRAIIENASGARPLGRGLKELSVEFLKHPLRFVGKREFHLIFGLYTATYVTANVVDSVCEYAEADNQMPKFIGTTAVNMSLCIAKDRAFARMFGVIAPAA-FPLTSIGLFAVRDSMTCGASFNAPKVLAKKIEDNGLMEKGNASTFAQLVCPAAVQFLSTPLHLMGLDLYNNKGHAMAQRVSFVQREYVKSVFARVGRIGPAFGIGGVGNTYFRNSL 259          
BLAST of mRNA_S-dermatodea_contig9247.17304.1 vs. uniprot
Match: A0A3M6VQY3_9STRA (Uncharacterized protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VQY3_9STRA)

HSP 1 Score: 184 bits (468), Expect = 2.980e-53
Identity = 103/241 (42.74%), Postives = 148/241 (61.41%), Query Frame = 1
Query:  244 LAMRLLSDVAAAAVASLMVSPFISIVDRAIIQSASGTMGMQASVSQGMRVLTTKPALFLARPDFICTFCLYGATYLAANAITTIAEEMRRSDALPKFLGTTAINMPGSIAKDQALTKLFGVVGGAARVPAASFALFTVRDVATMAAAFTLPTPMSAKMQEEFGVGSGMADGVSQLVSPGLVQLFSTPVHILGLDLYNHPSSSPAARLRVVQSSFVPAIIMRVCRIGVAFGVGGLGNTAIRK 966
            L  +L+ D AAA  ASL V+PFI+IVDRAII++ASG   +   + +        P  F+ + +F   F LY ATY+AANA+ ++ E +   + +PKF+GTTA+NM   IAKD+A  ++FGV+  AA  P AS  LF VRD  T AA+F  P  ++ K+++   +    A   +QL+ P  VQ  STP+H+LGLDLYN+   +      +V+  +V +++ RV RIG AFGVGG+GN   R 
Sbjct:   17 LVKQLMVDTAAAMAASLGVAPFITIVDRAIIENASGARPLGRGIKELSISFLKNPLRFVGKREFHIVFGLYTATYMAANAVDSVCEYIETDNQMPKFIGTTAVNMSLCIAKDRAFARMFGVIAPAA-FPLASIGLFAVRDSMTCAASFNAPKVLAKKIEDNKLMDKSNAGTFAQLICPAAVQFISTPLHLLGLDLYNNKGHTMTQHASLVRREYVKSVLARVGRIGPAFGVGGVGNAYFRN 256          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig9247.17304.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L555_9PHAE4.960e-14277.41Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LGM5_ECTSI4.490e-12374.18Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835Z5G8_9STRA1.850e-6247.03Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A5D6XW10_9STRA5.590e-6145.71Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
K3WSU5_GLOUD6.780e-6145.49Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A8K1CT18_PYTOL6.780e-6148.33Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A662XCZ4_9STRA5.880e-5945.20Uncharacterized protein n=2 Tax=Nothophytophthora ... [more]
A0A2D4BK36_PYTIN3.930e-5745.87Uncharacterized protein n=1 Tax=Pythium insidiosum... [more]
G4ZUB7_PHYSP7.740e-5442.80Uncharacterized protein n=4 Tax=Phytophthora TaxID... [more]
A0A3M6VQY3_9STRA2.980e-5342.74Uncharacterized protein n=2 Tax=Peronospora effusa... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig9247contigS-dermatodea_contig9247:350..2289 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score365.5
Seed ortholog evalue2.5e-98
Seed eggNOG ortholog2880.D8LGM5
EggNOG OGs28PN9@1,2QWAD@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-10_002780.1
Exons3
Model size975
Cds size975
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig9247.17304.1prot_S-dermatodea_contig9247.17304.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig9247 350..2289 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622925396.156902-CDS-S-dermatodea_contig9247:349..8151622925396.156902-CDS-S-dermatodea_contig9247:349..815Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9247 350..815 +
1694079905.2519438-CDS-S-dermatodea_contig9247:349..8151694079905.2519438-CDS-S-dermatodea_contig9247:349..815Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9247 350..815 +
1622925396.173684-CDS-S-dermatodea_contig9247:1405..16531622925396.173684-CDS-S-dermatodea_contig9247:1405..1653Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9247 1406..1653 +
1694079905.27017-CDS-S-dermatodea_contig9247:1405..16531694079905.27017-CDS-S-dermatodea_contig9247:1405..1653Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9247 1406..1653 +
1622925396.1892736-CDS-S-dermatodea_contig9247:2028..22891622925396.1892736-CDS-S-dermatodea_contig9247:2028..2289Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9247 2029..2289 +
1694079905.2809408-CDS-S-dermatodea_contig9247:2028..22891694079905.2809408-CDS-S-dermatodea_contig9247:2028..2289Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9247 2029..2289 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig9247.17304.1

>prot_S-dermatodea_contig9247.17304.1 ID=prot_S-dermatodea_contig9247.17304.1|Name=mRNA_S-dermatodea_contig9247.17304.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=325bp
PPSPPSSPRSTLVNARRALRLPIRNAPRLDRPSAAAVAAVASAAATATAN
SAARGFVAHRKRAGGRSGPVNLFERVGARGVLAMRLLSDVAAAAVASLMV
SPFISIVDRAIIQSASGTMGMQASVSQGMRVLTTKPALFLARPDFICTFC
LYGATYLAANAITTIAEEMRRSDALPKFLGTTAINMPGSIAKDQALTKLF
GVVGGAARVPAASFALFTVRDVATMAAAFTLPTPMSAKMQEEFGVGSGMA
DGVSQLVSPGLVQLFSTPVHILGLDLYNHPSSSPAARLRVVQSSFVPAII
MRVCRIGVAFGVGGLGNTAIRKNLH
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mRNA from alignment at S-dermatodea_contig9247:350..2289+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig9247.17304.1 ID=mRNA_S-dermatodea_contig9247.17304.1|Name=mRNA_S-dermatodea_contig9247.17304.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=1940bp|location=Sequence derived from alignment at S-dermatodea_contig9247:350..2289+ (Saccorhiza dermatodea SderLu1190fm monoicous)
CCCCCCTCTCCCCCTTCCTCTCCCCGTTCCACGCTCGTCAACGCGCGACG CGCTCTCAGGCTGCCGATCCGCAACGCCCCCCGATTAGACCGACCGAGCG CCGCAGCAGTTGCCGCGGTCGCCTCCGCCGCCGCAACCGCCACGGCTAAT AGCGCCGCTCGCGGCTTCGTCGCTCACCGGAAGCGCGCCGGCGGCCGGAG CGGCCCCGTTAACTTGTTTGAGCGGGTCGGCGCCCGCGGCGTGCTCGCGA TGCGCCTGCTGAGCGACGTAGCAGCTGCAGCGGTGGCGAGCCTGATGGTG AGCCCCTTCATCTCGATCGTGGACCGGGCGATCATCCAGAGCGCAAGCGG AACAATGGGCATGCAGGCGTCGGTGAGCCAGGGGATGCGGGTGCTGACGA CCAAGCCGGCGCTGTTCCTGGCCAGGCCAGACTTCATCTGCACTTTCTGC CTGTACGGCGCTACCTGTGAGTTTGGTTACAAGTACCTTTATTTCTGCTT TCGTCTCAAGTCTGGTACAGCAATACTTGAATCGAATATATTCCATACTT TTATACCTTTACGTACTTCCTTCTTTTTGTTTTCCCTCTTTGCTGTCTTG CTGTTGAACTTCTAATATATGCTACTGTATTATACTTCTCTGTGATGACA TAAGCTTGTTTTGTCTGGTATGAAACACACCTTATGCAGGGTAATTTGTG TATTGTTTGATACACACCACTGCTGCGTAATACTACTACGGTATACCGGT GGAACAAGGCATACATACACGTAAAGGGCGGCATGCCTGCACAAGTTCTG CACGCCGGCCGTTGGCTCCGTGACAAGTCTCGGCACACGTAGATGGATTC GAAGGAAGATCAAACCGGAAAGCCAGGAGAAACCTGCAACAAATGGACGA AACAACCCAAGAAAAACTCAAAAGAGGCCGTTACAGATGCGTACGCGTAC GCACACGCAATAATTATATCGGGTTGCTATATTTGTCCTTACCCCACTCC CCGTCCCCCCGTCCCCCCCTCTACCCTTCGTGCTACTCCCCGAAACGGCC CATCAGACCTCGCTGCGAACGCGATCACGACAATCGCCGAGGAGATGAGG CGCTCAGATGCCCTGCCCAAGTTCCTCGGCACAACGGCCATCAACATGCC CGGCTCGATCGCCAAGGACCAGGCGCTGACCAAGCTGTTCGGCGTGGTCG GCGGCGCCGCCAGAGTTCCTGCCGCCAGCTTCGCCCTCTTCACCGTTCGT GATGTCGCCACAATGGCCGCCGCGTTCACGCTGCCTACGCCCATGTCGGC GAAGGTGAGAATAATAAATAAGAGGTGTACGGGGGGGGGGTGTATATACA GCCGGCGTGTGCGACACCAGTTGGTTTTCCGAGAACAGCAGTGTGAGAGT GCTCGGTTTTTCGAAAGCACGGTTTTTGTTTGTCGTCATCAGTTCGAGAG CACCTATCTCCCTCTGCACGGCCGACAGCCCCGACTGCAAAGACTGAAGC AAAATATGCGATACACAAGTCACACTACTGTACTAGCCACAACTTGACCA CCGTTTTTTTATACACGGACTAACCCACACACACACCCCCCCCCGCGCCT CCTCCCCCACCCCTGCCCCCTAAACGCTTCGCGACTCCTTTAAAAAAACG CGTTTTATTGTCAAAAACTGCCGCGACAGATGCAAGAAGAGTTCGGTGTC GGCAGCGGAATGGCCGACGGCGTCTCTCAGCTGGTGTCGCCCGGGCTGGT GCAGCTTTTCTCTACGCCGGTGCACATCCTGGGCCTCGACCTGTACAACC ACCCTAGCTCGTCGCCCGCGGCGCGTCTCAGGGTGGTGCAGAGCTCGTTC GTGCCCGCGATCATCATGCGCGTGTGTCGCATCGGGGTCGCCTTCGGCGT GGGCGGGCTCGGAAACACCGCCATCCGAAAAAACCTCCAC
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Coding sequence (CDS) from alignment at S-dermatodea_contig9247:350..2289+

>mRNA_S-dermatodea_contig9247.17304.1 ID=mRNA_S-dermatodea_contig9247.17304.1|Name=mRNA_S-dermatodea_contig9247.17304.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1950bp|location=Sequence derived from alignment at S-dermatodea_contig9247:350..2289+ (Saccorhiza dermatodea SderLu1190fm monoicous)
CCCCCCTCTCCCCCTTCCTCTCCCCGTTCCACGCTCGTCAACGCGCGACG
CGCTCTCAGGCTGCCGATCCGCAACGCCCCCCGATTAGACCGACCGAGCG
CCGCAGCAGTTGCCGCGGTCGCCTCCGCCGCCGCAACCGCCACGGCTAAT
AGCGCCGCTCGCGGCTTCGTCGCTCACCGGAAGCGCGCCGGCGGCCGGAG
CGGCCCCGTTAACTTGTTTGAGCGGGTCGGCGCCCGCGGCGTGCTCGCGA
TGCGCCTGCTGAGCGACGTAGCAGCTGCAGCGGTGGCGAGCCTGATGGTG
AGCCCCTTCATCTCGATCGTGGACCGGGCGATCATCCAGAGCGCAAGCGG
AACAATGGGCATGCAGGCGTCGGTGAGCCAGGGGATGCGGGTGCTGACGA
CCAAGCCGGCGCTGTTCCTGGCCAGGCCAGACTTCATCTGCACTTTCTGC
CTGTACGGCGCTACCTCCCCCCTCTCCCCCTTCCTCTCCCCGTTCCACGC
TCGTCAACGCGCGACGCGCTCTCAGGCTGCCGATCCGCAACGCCCCCCGA
TTAGACCGACCGAGCGCCGCAGCAGTTGCCGCGGTCGCCTCCGCCGCCGC
AACCGCCACGGCTAATAGCGCCGCTCGCGGCTTCGTCGCTCACCGGAAGC
GCGCCGGCGGCCGGAGCGGCCCCGTTAACTTGTTTGAGCGGGTCGGCGCC
CGCGGCGTGCTCGCGATGCGCCTGCTGAGCGACGTAGCAGCTGCAGCGGT
GGCGAGCCTGATGGTGAGCCCCTTCATCTCGATCGTGGACCGGGCGATCA
TCCAGAGCGCAAGCGGAACAATGGGCATGCAGGCGTCGGTGAGCCAGGGG
ATGCGGGTGCTGACGACCAAGCCGGCGCTGTTCCTGGCCAGGCCAGACTT
CATCTGCACTTTCTGCCTGTACGGCGCTACCTACCTCGCTGCGAACGCGA
TCACGACAATCGCCGAGGAGATGAGGCGCTCAGATGCCCTGCCCAAGTTC
CTCGGCACAACGGCCATCAACATGCCCGGCTCGATCGCCAAGGACCAGGC
GCTGACCAAGCTGTTCGGCGTGGTCGGCGGCGCCGCCAGAGTTCCTGCCG
CCAGCTTCGCCCTCTTCACCGTTCGTGATGTCGCCACAATGGCCGCCGCG
TTCACGCTGCCTACGCCCATGTCGGCGAAGACCTCGCTGCGAACGCGATC
ACGACAATCGCCGAGGAGATGAGGCGCTCAGATGCCCTGCCCAAGTTCCT
CGGCACAACGGCCATCAACATGCCCGGCTCGATCGCCAAGGACCAGGCGC
TGACCAAGCTGTTCGGCGTGGTCGGCGGCGCCGCCAGAGTTCCTGCCGCC
AGCTTCGCCCTCTTCACCGTTCGTGATGTCGCCACAATGGCCGCCGCGTT
CACGCTGCCTACGCCCATGTCGGCGAAGATGCAAGAAGAGTTCGGTGTCG
GCAGCGGAATGGCCGACGGCGTCTCTCAGCTGGTGTCGCCCGGGCTGGTG
CAGCTTTTCTCTACGCCGGTGCACATCCTGGGCCTCGACCTGTACAACCA
CCCTAGCTCGTCGCCCGCGGCGCGTCTCAGGGTGGTGCAGAGCTCGTTCG
TGCCCGCGATCATCATGCGCGTGTGTCGCATCGGGGTCGCCTTCGGCGTG
GGCGGGCTCGGAAACACCGCCATCCGAAAAAACCTCCACATGCAAGAAGA
GTTCGGTGTCGGCAGCGGAATGGCCGACGGCGTCTCTCAGCTGGTGTCGC
CCGGGCTGGTGCAGCTTTTCTCTACGCCGGTGCACATCCTGGGCCTCGAC
CTGTACAACCACCCTAGCTCGTCGCCCGCGGCGCGTCTCAGGGTGGTGCA
GAGCTCGTTCGTGCCCGCGATCATCATGCGCGTGTGTCGCATCGGGGTCG
CCTTCGGCGTGGGCGGGCTCGGAAACACCGCCATCCGAAAAAACCTCCAC
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