prot_S-dermatodea_contig92239.17288.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig92239.17288.1
Unique Nameprot_S-dermatodea_contig92239.17288.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length110
Homology
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BLAST of mRNA_S-dermatodea_contig92239.17288.1 vs. uniprot
Match: A0A6H5L0A8_9PHAE (PAP_fibrillin domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0A8_9PHAE)

HSP 1 Score: 134 bits (338), Expect = 2.520e-35
Identity = 69/108 (63.89%), Postives = 82/108 (75.93%), Query Frame = 0 
Query:    1 MVQGFFSVAFKASEARQVVDASASIVINACRARLRFTPLAIPLAQKGPYQSSTGRKVTVNMTPRKKEGLGRFLPSLRPGKATAEVTYLSNRWRICRVGGVTVAFRKSG 108
            +++G FS  FK S+ RQVVD  AS V+NACRARLR TPLA+ +A+KG Y+ +  RKV V M P KK  L R LPSLR GK  AEVTYLS++WRICR GGVT+AFRKSG
Sbjct:  345 VIKGLFSGFFKTSDRRQVVDTGASSVLNACRARLRLTPLALRVAKKGSYRKTAERKVLVEMPPTKKGLLRRVLPSLRAGKVEAEVTYLSDKWRICRAGGVTLAFRKSG 452
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BLAST of mRNA_S-dermatodea_contig92239.17288.1 vs. uniprot
Match: D8LNG7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNG7_ECTSI)

HSP 1 Score: 70.5 bits (171), Expect = 3.950e-14
Identity = 34/48 (70.83%), Postives = 38/48 (79.17%), Query Frame = 0 
Query:   61 MTPRKKEGLGRFLPSLRPGKATAEVTYLSNRWRICRVGGVTVAFRKSG 108
            M P KK  L R LPSLR GK  AEVTYLS++WR+CR GGVTVAFRK+G
Sbjct:    1 MPPTKKGLLRRVLPSLRAGKVEAEVTYLSDKWRVCRAGGVTVAFRKNG 48
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig92239.17288.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L0A8_9PHAE2.520e-3563.89PAP_fibrillin domain-containing protein n=1 Tax=Ec... [more]
D8LNG7_ECTSI3.950e-1470.83Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig92239contigS-dermatodea_contig92239:70..399 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig92239.17288.1mRNA_S-dermatodea_contig92239.17288.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig92239 70..429 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig92239.17288.1 ID=prot_S-dermatodea_contig92239.17288.1|Name=mRNA_S-dermatodea_contig92239.17288.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=110bp
MVQGFFSVAFKASEARQVVDASASIVINACRARLRFTPLAIPLAQKGPYQ
SSTGRKVTVNMTPRKKEGLGRFLPSLRPGKATAEVTYLSNRWRICRVGGV
TVAFRKSGN*
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