prot_S-dermatodea_contig92098.17275.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig92098.17275.1
Unique Nameprot_S-dermatodea_contig92098.17275.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length72
Homology
BLAST of mRNA_S-dermatodea_contig92098.17275.1 vs. uniprot
Match: A0A6H5L8Q2_9PHAE (Nop domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L8Q2_9PHAE)

HSP 1 Score: 111 bits (277), Expect = 5.670e-27
Identity = 53/61 (86.89%), Postives = 59/61 (96.72%), Query Frame = 0
Query:   11 QVSLASRFDSYGNNSSGEIGRQWRAEIEDKIEKWQELQTAKTKKALPKPDDMPARKRGGKR 71
            +VSLASRFDSYGN+ SG +GRQWRAE+EDKIEKWQE+QTAKTKKALPKPDDMPARKRGG+R
Sbjct:  368 KVSLASRFDSYGNDPSGHVGRQWRAEVEDKIEKWQEMQTAKTKKALPKPDDMPARKRGGRR 428          
BLAST of mRNA_S-dermatodea_contig92098.17275.1 vs. uniprot
Match: A0A7S2XZL3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZL3_9STRA)

HSP 1 Score: 72.0 bits (175), Expect = 4.550e-13
Identity = 36/58 (62.07%), Postives = 44/58 (75.86%), Query Frame = 0
Query:   14 LASRFDSYGNNSSGEIGRQWRAEIEDKIEKWQELQTAKTKKALPKPDDMPARKRGGKR 71
            LA+R DS+  +  G +G++ R E+EDKIEKWQE Q AKTKKALP PD  P +KRGGKR
Sbjct:  275 LAARVDSFQQDMEGALGKKLRTELEDKIEKWQEPQKAKTKKALPAPDSKPKKKRGGKR 332          
BLAST of mRNA_S-dermatodea_contig92098.17275.1 vs. uniprot
Match: A0A7S2SGM8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SGM8_9STRA)

HSP 1 Score: 68.6 bits (166), Expect = 2.840e-12
Identity = 34/61 (55.74%), Postives = 46/61 (75.41%), Query Frame = 0
Query:   11 QVSLASRFDSYGNNSSGEIGRQWRAEIEDKIEKWQELQTAKTKKALPKPDDMPARKRGGKR 71
            +V+LA+R D + +  SG  G + R EI+DK+ KWQE Q A+TKKALP PD+ P++KRGGKR
Sbjct:   57 KVALAARIDLHQSEPSGTAGAKLRVEIDDKVTKWQETQQARTKKALPIPDEKPSKKRGGKR 117          
BLAST of mRNA_S-dermatodea_contig92098.17275.1 vs. uniprot
Match: A0A7S2SGQ5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SGQ5_9STRA)

HSP 1 Score: 68.6 bits (166), Expect = 7.770e-12
Identity = 34/61 (55.74%), Postives = 46/61 (75.41%), Query Frame = 0
Query:   11 QVSLASRFDSYGNNSSGEIGRQWRAEIEDKIEKWQELQTAKTKKALPKPDDMPARKRGGKR 71
            +V+LA+R D + +  SG  G + R EI+DK+ KWQE Q A+TKKALP PD+ P++KRGGKR
Sbjct:  354 KVALAARIDLHQSEPSGTAGAKLRVEIDDKVTKWQETQQARTKKALPIPDEKPSKKRGGKR 414          
BLAST of mRNA_S-dermatodea_contig92098.17275.1 vs. uniprot
Match: A0A6G0X9V3_9STRA (Nop domain-containing protein n=5 Tax=Aphanomyces TaxID=100860 RepID=A0A6G0X9V3_9STRA)

HSP 1 Score: 66.2 bits (160), Expect = 5.030e-11
Identity = 37/71 (52.11%), Postives = 49/71 (69.01%), Query Frame = 0
Query:    1 QKSCRRTKIKQVSLASRFDSYGNNSSGEIGRQWRAEIEDKIEKWQELQTAKTKKALPKPDDMPARKRGGKR 71
            +K   R    +V+LA+R DS  + ++   G+Q+  E+ DK EKWQ+ Q AKTKKALP+PDD P RKRGGKR
Sbjct:  298 RKKANRVVAGKVALAARVDSQPHRTAS-CGQQFYRELADKFEKWQQPQKAKTKKALPRPDDKPRRKRGGKR 367          
BLAST of mRNA_S-dermatodea_contig92098.17275.1 vs. uniprot
Match: A0A024U7H9_9STRA (Nop domain-containing protein n=3 Tax=Aphanomyces TaxID=100860 RepID=A0A024U7H9_9STRA)

HSP 1 Score: 64.7 bits (156), Expect = 1.760e-10
Identity = 34/61 (55.74%), Postives = 48/61 (78.69%), Query Frame = 0
Query:   11 QVSLASRFDSYGNNSSGEIGRQWRAEIEDKIEKWQELQTAKTKKALPKPDDMPARKRGGKR 71
            +V+LA+R DS  + ++  IG+Q+  E+++K EKWQ+ Q AKTKKALP+PD+ P RKRGGKR
Sbjct:  313 KVALAARVDSQPHRTAT-IGQQFYKELQEKFEKWQQPQKAKTKKALPRPDEKPRRKRGGKR 372          
BLAST of mRNA_S-dermatodea_contig92098.17275.1 vs. uniprot
Match: A0A5D6Y1G7_9STRA (Nop domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y1G7_9STRA)

HSP 1 Score: 64.7 bits (156), Expect = 1.760e-10
Identity = 40/72 (55.56%), Postives = 49/72 (68.06%), Query Frame = 0
Query:    2 KSCRRTKIKQVSLASRFDSY--GNNSSGEIGRQWRAEIEDKIEKWQELQTAKTKKALPKPDDMPARKRGGKR 71
            K+CR    K V+L +R DS   G ++ G +G Q+RA +  KI KWQE Q AKTKKALP PD+ P RKRGGKR
Sbjct:  331 KACRALAGK-VALMARIDSQPLGADAEGRVGAQFRAALAAKIAKWQEPQKAKTKKALPIPDEKPRRKRGGKR 401          
BLAST of mRNA_S-dermatodea_contig92098.17275.1 vs. uniprot
Match: A0A7S4DKU2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DKU2_HETAK)

HSP 1 Score: 64.3 bits (155), Expect = 2.370e-10
Identity = 39/71 (54.93%), Postives = 49/71 (69.01%), Query Frame = 0
Query:    1 QKSCRRTKIKQVSLASRFDSYGNNSSGEIGRQWRAEIEDKIEKWQELQTAKTKKALPKPDDMPARKRGGKR 71
            QK+ + T  K  +LA+R DSY +  SG+ G++ R EIEDKI+KWQE Q  KTKKA PKP+     KRGGKR
Sbjct:  249 QKALKVTAAK-CALAARVDSYQSAPSGQKGQELRQEIEDKIQKWQEPQEGKTKKARPKPEGGRKSKRGGKR 318          
BLAST of mRNA_S-dermatodea_contig92098.17275.1 vs. uniprot
Match: A0A225X1E4_9STRA (U4/U6 small nuclear ribonucleoprotein Prp31 n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225X1E4_9STRA)

HSP 1 Score: 63.9 bits (154), Expect = 3.290e-10
Identity = 38/72 (52.78%), Postives = 51/72 (70.83%), Query Frame = 0
Query:    2 KSCRRTKIKQVSLASRFDS--YGNNSSGEIGRQWRAEIEDKIEKWQELQTAKTKKALPKPDDMPARKRGGKR 71
            K+CR    K ++L +R DS  + N++ G +G ++R E+  K+EKWQE Q AKTKKALP PD+ P RKRGGKR
Sbjct:  321 KACRAVAGK-LALMARVDSQPHQNDTEGLVGARFRTELVGKMEKWQEPQKAKTKKALPIPDEKPRRKRGGKR 391          
BLAST of mRNA_S-dermatodea_contig92098.17275.1 vs. uniprot
Match: H3G8Y1_PHYRM (Nop domain-containing protein n=17 Tax=Phytophthora TaxID=4783 RepID=H3G8Y1_PHYRM)

HSP 1 Score: 63.9 bits (154), Expect = 3.290e-10
Identity = 38/72 (52.78%), Postives = 51/72 (70.83%), Query Frame = 0
Query:    2 KSCRRTKIKQVSLASRFDS--YGNNSSGEIGRQWRAEIEDKIEKWQELQTAKTKKALPKPDDMPARKRGGKR 71
            K+CR    K ++L +R DS  + N++ G +G ++R E+  K+EKWQE Q AKTKKALP PD+ P RKRGGKR
Sbjct:  326 KACRAVAGK-LALMARVDSQPHQNDTEGLVGARFRTELVGKMEKWQEPQKAKTKKALPIPDEKPRRKRGGKR 396          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig92098.17275.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L8Q2_9PHAE5.670e-2786.89Nop domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A7S2XZL3_9STRA4.550e-1362.07Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S2SGM8_9STRA2.840e-1255.74Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2SGQ5_9STRA7.770e-1255.74Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A6G0X9V3_9STRA5.030e-1152.11Nop domain-containing protein n=5 Tax=Aphanomyces ... [more]
A0A024U7H9_9STRA1.760e-1055.74Nop domain-containing protein n=3 Tax=Aphanomyces ... [more]
A0A5D6Y1G7_9STRA1.760e-1055.56Nop domain-containing protein n=1 Tax=Pythium bras... [more]
A0A7S4DKU2_HETAK2.370e-1054.93Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A225X1E4_9STRA3.290e-1052.78U4/U6 small nuclear ribonucleoprotein Prp31 n=1 Ta... [more]
H3G8Y1_PHYRM3.290e-1052.78Nop domain-containing protein n=17 Tax=Phytophthor... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR042239Nop, C-terminal domainGENE3D1.10.246.90coord: 1..45
e-value: 4.8E-7
score: 31.5
NoneNo IPR availablePANTHERPTHR13904:SF0U4/U6 SMALL NUCLEAR RIBONUCLEOPROTEIN PRP31coord: 10..71
IPR027105U4/U6 small nuclear ribonucleoprotein Prp31PANTHERPTHR13904PRE-MRNA SPLICING FACTOR PRP31coord: 10..71
IPR002687Nop domainPROSITEPS51358NOPcoord: 1..46
score: 10.381
IPR036070Nop domain superfamilySUPERFAMILY89124Nop domaincoord: 10..46

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig92098contigS-dermatodea_contig92098:217..432 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig92098.17275.1mRNA_S-dermatodea_contig92098.17275.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig92098 217..432 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig92098.17275.1 ID=prot_S-dermatodea_contig92098.17275.1|Name=mRNA_S-dermatodea_contig92098.17275.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=72bp
QKSCRRTKIKQVSLASRFDSYGNNSSGEIGRQWRAEIEDKIEKWQELQTA
KTKKALPKPDDMPARKRGGKR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR042239Nop_C
IPR027105Prp31
IPR002687Nop_dom
IPR036070Nop_dom_sf