mRNA_S-dermatodea_contig9193.17255.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig9193.17255.1
Unique NamemRNA_S-dermatodea_contig9193.17255.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
BLAST of mRNA_S-dermatodea_contig9193.17255.1 vs. uniprot
Match: D7G8L2_ECTSI (Ubiquitin-activating enzyme E1 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8L2_ECTSI)

HSP 1 Score: 548 bits (1413), Expect = 9.580e-180
Identity = 336/754 (44.56%), Postives = 438/754 (58.09%), Query Frame = 1
Query:  247 AREQISSGLRREYIYELHNNKINGGRGVMAAPG-RYAQLHVCLLSLHMFSQEHGHLPVVLGQDQADEVVRIAEEIVETGRHIPTEISSQPETVDVSLCRQVAALARVSIPAVNFQLGGIAAAAGLDCIS----------HLQLASSDPESRPEQEPVCNRGVFFSRAHEWVFVDKINYARDEQGDPLHVLKWVQEGGGKGLAVDPDPLDSWLGP-VASSVVGARVALIGCGRLGRDVARCLLLTGACTGSRGRMVFID--DGEALTATPRKGQWNTDER---FPGRASVLQGLASDSPSPG-VHASAFGGSVFDVDGNADLWEGVDAVIICVGRG---------GGTEAVAAGGHS--CERLVRFVSHKCVLHGKPLVWGWAGGSXXXXXXVEVMAPGRTSCLTCSTHGGVKELVERRTSRNNKAMLQGDTGVTPKTQHASVPSTRA-DKAAGDSWRQSGRKIGVVRSTVAGLVTEEIVKLLRPRCSRSELRNWKVLGGAQNDATVSPGRSDSGGGXXXXQGRKPTRQHSGGPRRRDHQEILG-------------VRQVGTIPDPPHVVLSTPFDPFSGEGIRAVPEGFTEWGIEEIHPLSAGKSNTGRSTVDRGEETDLLSLRALVGIILARFGVEIKSVSAASPGSECRAGGMGGEEWGASDGSKLLWAEWEK-DGRDGSQGSRLQRAEIPKMDRSVMSLWKEVVTIHTSRGEEGVPSAPGDKEPRFLFLDVRGVIFGGNTTLPVFKYWVR 2376
            ARE ++SGL     YEL   K        A    R+ QLH+C  +LH+F QEHGHLP+ L +DQA+EVVRIAEE++E GR +P   S QP ++DV+LCR+VA ++RV +P+V+FQLGG+ AA  LD +           +L+  S    +R  +E     G     A +W+ VD+++     + D    ++W+      G A DP PL +WLG  +++    AR+A+IGCGRLGRDVARCLL TGACT  RGRMVFID  D  ++ A+   G            GRA+VL+ L S    PG    SAFGG+V D D   DLWEG+DAV++C GRG         GG  A  AGG +  CE LVRFVSHKC LH KPLVWGWAG        VEVMAP RTSCL CS+HGGVKE+ ERRTS + +A+   D     +    S P     D+  G++W    R  GV RS VAG++  E+ K+L+PRC R ELRNW +    + D++   G  DS       +      +    PR    + + G             +R V T PDPP +VLST FDPFSG+ +RA+PEGFTEWG+EEI P     S      VD G      SLR L+ ++ ARFGV  KSV+AA+PGSECR G  G +E G + G  +LWAEWE+ +G +  Q  R     + KMD++V+SLW++ V   ++ GE G  ++   KEPRFLFLDVRGV+   N  LPV KYWVR
Sbjct:   12 ARESVTSGLLSASEYELQQTKFERLAAEEARLFCRHVQLHLCFAALHVFWQEHGHLPIALDRDQANEVVRIAEELLEIGRDVPAGFSPQPGSIDVALCRRVAGISRVPVPSVSFQLGGLVAATALDLVQAYRPRECSRGNLEGPSGGNNARTTKEHPPAPGE--EPASQWLLVDELDSGLSGR-DQGRTVEWM------GCAKDPLPLQAWLGTDLSNKFASARIAVIGCGRLGRDVARCLLHTGACTNPRGRMVFIDHEDDYSIYASSSPGTTPFHAECDVIQGRAAVLRELVSGHIGPGGSRMSAFGGAVQDTDTEIDLWEGIDAVVVCAGRGIAGEGRRGRGGGTADGAGGMAGDCEALVRFVSHKCTLHSKPLVWGWAGSGGEGGAGVEVMAPCRTSCLICSSHGGVKEMTERRTSSSVEAVPSRDRRA--RRASCSTPGNCCRDEIGGEAWDPKDRCFGVARSAVAGVMVAELAKVLKPRCRRDELRNWTL----KADSSCHCGNEDSPSKSWRSESHDDKTKEGDKPRLTP-ESVSGLLSQPAGKGGSTHIRPVVTSPDPPLMVLSTSFDPFSGDSLRAIPEGFTEWGVEEIRPSVEIISAPRLPNVDVGNP---FSLRTLISLVFARFGVVAKSVAAAAPGSECRVGSGGCQELGGAFGGNILWAEWERAEGNNSRQDGRRTGGVVCKMDQNVLSLWQQRVLSSSTHGEPGRRTSCEGKEPRFLFLDVRGVMGEENAVLPVLKYWVR 746          
BLAST of mRNA_S-dermatodea_contig9193.17255.1 vs. uniprot
Match: A0A6H5KDR0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDR0_9PHAE)

HSP 1 Score: 405 bits (1042), Expect = 7.080e-126
Identity = 275/693 (39.68%), Postives = 363/693 (52.38%), Query Frame = 1
Query:  487 IPTEISSQPETVDVSLCRQVAALARVSIPAVNFQLGGIAAAAGLDCIS----------HLQLASSDPESRPEQEPVCNRGVFFSRAHEWVFVDKINYARDEQGDPLHVLKWVQ---------EGGGKGLAV-----------------------DPDPLDSWLGP-VASSVVGARVALIGCGRLGRDVARCLLLTGACTGSRGRMVFIDDGEA----LTATPRKGQWNTD-ERFPGRASVLQGLASDSPSPG-VHASAFGGSVFDVDGNADLWEGVDAVIICVGRGGGTEAVAAGGHSCERLVRFVSHKCVLHGKPLVWGWAGGSXXXXXXVEVMAPGRTSCLTCSTHGGVKELVERRTSRNNKAMLQGDTGVTPKTQHASVPSTRADKAAGDSWRQSGRKIGVVRSTVAGLVTEEIVKLLRPRCSRSELRNWKVL---------GGAQNDATVSPGRSDSGGGXXXXQGRK----PTRQHSGGPRRRDHQEILGVRQVGTIPDPPHVVLSTPFDPFSGEGIRAVPEGFTEWGIEEIHPLSAGKSNTGRSTVDRGEETDLLSLRALVGIILARFGVEIKSVSAASPGSECRAGGMGGEEWGASDGSKLLWAEWEK-DGRDGSQGSRLQRAEIPKMDRSVMSLWKEVVTIHTSRGEEGVPSAPGDKEPRFLFLDVRGVIFGGNTTLPVFKYWVR 2376
            +P   S QPE++DV+LCR+VA ++RV +P+V+FQL G+ AA  LD             +L+  S    +   +E     GV    A +W  VD+++     + DP   ++W+           G G   AV                       DP P+ +WLG  + +    AR+A+IGCGRLGRDVARCLL TGACT  RGRMVFID G+      +++P    ++ + +   GRA+ L  L S    PG    SA  G+V D D   DLWEGVDAV+IC GRG G E         ER  R                           VEVMAP RTSCL CS+HGGVK+++ERRTS + +AM   D G   +   ++  +   D++ G++W    R  GV RS VAG++  E+ K+L+PRC R ELRNW +          GG  + +  S    D        +G K    P    +   ++        VR V T PDPP +VLST FDPFSG  +RA+PEGFTEWG+EEI P     S      VD G      SLR L+ ++ ARFGV+ KSV+AA+PGSECR G  G ++ G + G K+LWAEWEK  G D  Q  R     + KMD +V+SLW++ V   ++ GE G  +    K PRFLFLDVRGVI G N  LPV KYWVR
Sbjct:   14 VPAGFSPQPESIDVALCRRVAGISRVPVPSVSFQLCGLVAATALDLAEVYCPRECSRGNLESPSGGDNALTTKEHRPAPGV--EPASQWYLVDELDSGLSGR-DPGRTVEWMACAKGESELANGVGGRTAVKVVQCGFSSPRTLAWETTSNGSTDPLPVQAWLGTDLNNKFASARIAVIGCGRLGRDVARCLLHTGACTNPRGRMVFIDHGDDSSIYTSSSPGTAPFHAECDVIQGRAAALCELVSGRIDPGGSRMSAVDGAVQDTDTEIDLWEGVDAVVICAGRGSGRE---------ERRGR------------------------GEGVEVMAPCRTSCLICSSHGGVKDMIERRTSSSVEAMPSRD-GRARRAPCSTPGNCCRDESRGEAWAPKDRCFGVARSAVAGVMVAELAKVLKPRCRRDELRNWTLKADSSCHCGNGGIPSKSWRSGAHDDK-----TKEGEKLRPAPESVSASVDQQAGTAGSTHVRSVVTSPDPPLMVLSTSFDPFSGNSLRAIPEGFTEWGVEEIRPSIEIISTPRLPNVDVGNP---FSLRTLISLVFARFGVDAKSVAAAAPGSECRVGSGGCQDLGGASGGKILWAEWEKAGGNDSRQDGRRTGGVVCKMDHNVLSLWQQRVLSSSTHGEAGRRTPCERKVPRFLFLDVRGVIGGENAVLPVLKYWVR 661          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig9193.17255.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G8L2_ECTSI9.580e-18044.56Ubiquitin-activating enzyme E1 1 n=1 Tax=Ectocarpu... [more]
A0A6H5KDR0_9PHAE7.080e-12639.68Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig9193contigS-dermatodea_contig9193:313..5630 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons6
Model size2901
Cds size2301
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig9193.17255.1prot_S-dermatodea_contig9193.17255.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig9193 391..5108 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622925392.3787441-UTR-S-dermatodea_contig9193:312..3901622925392.3787441-UTR-S-dermatodea_contig9193:312..390Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig9193 313..390 +
1694079902.6523337-UTR-S-dermatodea_contig9193:312..3901694079902.6523337-UTR-S-dermatodea_contig9193:312..390Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig9193 313..390 +
1622925392.4773395-UTR-S-dermatodea_contig9193:5108..56301622925392.4773395-UTR-S-dermatodea_contig9193:5108..5630Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig9193 5109..5630 +
1694079902.7379732-UTR-S-dermatodea_contig9193:5108..56301694079902.7379732-UTR-S-dermatodea_contig9193:5108..5630Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig9193 5109..5630 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622925392.397181-CDS-S-dermatodea_contig9193:390..7981622925392.397181-CDS-S-dermatodea_contig9193:390..798Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9193 391..798 +
1694079902.6638713-CDS-S-dermatodea_contig9193:390..7981694079902.6638713-CDS-S-dermatodea_contig9193:390..798Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9193 391..798 +
1622925392.4123921-CDS-S-dermatodea_contig9193:1112..14461622925392.4123921-CDS-S-dermatodea_contig9193:1112..1446Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9193 1113..1446 +
1694079902.6775515-CDS-S-dermatodea_contig9193:1112..14461694079902.6775515-CDS-S-dermatodea_contig9193:1112..1446Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9193 1113..1446 +
1622925392.4264085-CDS-S-dermatodea_contig9193:2314..25271622925392.4264085-CDS-S-dermatodea_contig9193:2314..2527Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9193 2315..2527 +
1694079902.6866968-CDS-S-dermatodea_contig9193:2314..25271694079902.6866968-CDS-S-dermatodea_contig9193:2314..2527Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9193 2315..2527 +
1622925392.4364471-CDS-S-dermatodea_contig9193:3003..33081622925392.4364471-CDS-S-dermatodea_contig9193:3003..3308Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9193 3004..3308 +
1694079902.6985772-CDS-S-dermatodea_contig9193:3003..33081694079902.6985772-CDS-S-dermatodea_contig9193:3003..3308Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9193 3004..3308 +
1622925392.452423-CDS-S-dermatodea_contig9193:3621..44821622925392.452423-CDS-S-dermatodea_contig9193:3621..4482Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9193 3622..4482 +
1694079902.7147768-CDS-S-dermatodea_contig9193:3621..44821694079902.7147768-CDS-S-dermatodea_contig9193:3621..4482Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9193 3622..4482 +
1622925392.466201-CDS-S-dermatodea_contig9193:4928..51081622925392.466201-CDS-S-dermatodea_contig9193:4928..5108Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9193 4929..5108 +
1694079902.7260916-CDS-S-dermatodea_contig9193:4928..51081694079902.7260916-CDS-S-dermatodea_contig9193:4928..5108Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9193 4929..5108 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig9193.17255.1

>prot_S-dermatodea_contig9193.17255.1 ID=prot_S-dermatodea_contig9193.17255.1|Name=mRNA_S-dermatodea_contig9193.17255.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=767bp
MSRSLREALIDPRFPTDHHANEEGYRASISPVPPSHGQSQSAATTKRSRS
SSSSCCAREQISSGLRREYIYELHNNKINGGRGVMAAPGRYAQLHVCLLS
LHMFSQEHGHLPVVLGQDQADEVVRIAEEIVETGRHIPTEISSQPETVDV
SLCRQVAALARVSIPAVNFQLGGIAAAAGLDCISHLQLASSDPESRPEQE
PVCNRGVFFSRAHEWVFVDKINYARDEQGDPLHVLKWVQEGGGKGLAVDP
DPLDSWLGPVASSVVGARVALIGCGRLGRDVARCLLLTGACTGSRGRMVF
IDDGEALTATPRKGQWNTDERFPGRASVLQGLASDSPSPGVHASAFGGSV
FDVDGNADLWEGVDAVIICVGRGGGTEAVAAGGHSCERLVRFVSHKCVLH
GKPLVWGWAGGSGGGGGGVEVMAPGRTSCLTCSTHGGVKELVERRTSRNN
KAMLQGDTGVTPKTQHASVPSTRADKAAGDSWRQSGRKIGVVRSTVAGLV
TEEIVKLLRPRCSRSELRNWKVLGGAQNDATVSPGRSDSGGGDDEEQGRK
PTRQHSGGPRRRDHQEILGVRQVGTIPDPPHVVLSTPFDPFSGEGIRAVP
EGFTEWGIEEIHPLSAGKSNTGRSTVDRGEETDLLSLRALVGIILARFGV
EIKSVSAASPGSECRAGGMGGEEWGASDGSKLLWAEWEKDGRDGSQGSRL
QRAEIPKMDRSVMSLWKEVVTIHTSRGEEGVPSAPGDKEPRFLFLDVRGV
IFGGNTTLPVFKYWVR*
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mRNA from alignment at S-dermatodea_contig9193:313..5630+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig9193.17255.1 ID=mRNA_S-dermatodea_contig9193.17255.1|Name=mRNA_S-dermatodea_contig9193.17255.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=5318bp|location=Sequence derived from alignment at S-dermatodea_contig9193:313..5630+ (Saccorhiza dermatodea SderLu1190fm monoicous)
CGGGCAGTGGGTTGCGGCTTCGTCCTGGCAGAAGCGCGCGGAGCGATAGG GCGGCTCTTTTGTGACCCTAGCGGTGGAATGTCGCGCAGCTTGCGGGAGG CTCTCATTGACCCAAGGTTCCCGACAGACCACCACGCAAACGAGGAGGGA TATAGGGCATCCATCTCTCCGGTACCGCCGTCTCACGGGCAGAGTCAATC TGCAGCAACAACGAAGCGATCGCGGAGCAGTAGTAGCAGTTGCTGTGCTC GCGAGCAAATTTCTTCTGGGCTTCGAAGGGAATATATTTATGAATTGCAT AACAATAAGATAAATGGTGGGAGGGGGGTCATGGCCGCCCCCGGGCGGTA CGCCCAGCTGCACGTCTGCTTGCTCTCCTTGCACATGTTCTCGCAAGAGC ACGGACATCTACCGGTGGTACTGGGGCAGGATCAGGCTGACGAGGTGGTG CGCATTGCAGAAGAAATTGTGGAGACTGGTCGACATGTGAGATATTAACT TCGGCGTGTGGTAGGATGCTTCTTGAATGGTATTGTCCCCTGTGACAAAC GTTTGTTTGTCTGCTGCAATCTGTATCTGTAATGAACAAGCCGGAAGCAA GCGGAAAAAATGCACAGCAAATTGCTGACGGCATATTATGATCTATGAAC CATTGTTGCCCTTGTGATCGGTCGTTACAGCAATGGTTCTCATTTGTTGC TGCTGGGTTGTTTTCGATCGTTTCATATTTCAAGAAAGAGATCAGGCTCG ATACCTCCCCCTTCTCCCTGTCTCGCTTCTGCCTGCATCTGCACCACCAG ATCCCGACGGAAATTTCCTCCCAACCAGAGACTGTCGACGTCTCACTTTG CCGGCAAGTGGCCGCACTCGCCCGCGTTTCCATTCCCGCGGTCAATTTCC AGCTCGGAGGAATAGCGGCGGCGGCGGGTTTGGACTGCATCAGTCACCTA CAGCTCGCTTCCAGCGATCCGGAGAGCCGGCCAGAACAAGAGCCAGTCTG CAATCGGGGAGTTTTTTTTTCCAGGGCGCATGAGTGGGTCTTCGTCGATA AGATAAACTATGCGCGGGATGAACAAGGAGACCCACTACACGTGCTAAAA TGGGTGCAGGAAGGGGGGGGCAAAGGACTCGCAGGTGAGTTTAACGAACA GAAATGTACACGGTATCATACTGGTCGGAGCTTTGGAAGAAGACGCCTAA AACAATGTTTTTAGAGCTATTCCTCCAAAGGTTCGGAGAGAGTGCAATTA CTTGCGATCGAGTGGTTCTCGCGTTGTTGCAGGTGGATATGCACATTTGT GACACGGCGAAGTGTGGTCAATAGCCCGATCTTCGGGAACGTTAACCAGT AGACATTAACACTTGGTATACAAAGAAATTCCCGCTATTTTTTACCGGCC AAAGCTGACAGGCTGTGGTCGGAATGTGGTGTCGGAATGTCGGAAGAGCC GTCGGGGAAATTTGAGGGATATTTGGTTCAAACGCCGGGCCGCGTTTGAG TGCTACGGGTCTCGGATGAAGGCTATGAAGGCGGTATCGGTTGGGATTAG GGTTAGGGTTAGGTTGGTTGGGTAAACGCCTGGGGCCTCGTGCCAGTGCT TACCAACCACAAATTTAATAAAAAATTAGCTGAGTTGTAACGTGTTCATC GGAAATTCCTTCCTGTCTGCATACAAAGTGGCAGTATCCCCTCGCATTAA CCGGCGCCCGGGCAATTTCAGCACTATCGCCAAGGGCCTAAATTGATCGC AGCAGTGCATTCTTCAGCTCATTCTGTCTGGCGTTTTCACATGCTTATCA AACACACGTAGTTGTGCTTCCCATCCTGAGGACATGGCGAACTGAAAAAA AAATGGTTTTCACGTGGCTTCTGCCCCGATATGTCTGCATCTTCCCTTGG ATATAGAAACATGAAACACAGAGCATCGTTCCGATCTTGTACGGTGGATG GTGTGCCACTCAACGTGCCAACCCTCGCGGCCCCGCTCGACACAACGCAC AGTCGACCCCGACCCCCTGGACTCGTGGCTCGGCCCCGTCGCAAGCAGCG TCGTAGGCGCCCGTGTAGCGCTGATCGGGTGCGGCCGTTTGGGAAGGGAC GTCGCTCGATGTCTTCTTCTCACGGGCGCGTGTACAGGATCGCGAGGGCG TATGGTGTTCATCGATGACGGGGAGGCGTTGACTGCTACCCCGCGAAAAG GACAGTGGAATACCGGTGAGCTGTCAAAGCCTGCTTGCTCGCTTGAGGGG GGCAACTTACACGTTGGACCGGTGGTGGTCAAGCGTTCGCAGAGCTACGG ATATGTTGATTTCGTATTGGAGAGCTTCCTGGTTCGGATTAGGAAATAGC GCCAGGGCGGTATAATACGATGAGGTGCAATAAAAGCTGTGAATATTTGT ATTTGTGAAAAGATAGCTCCCCGTGGGATGGCCTTCGCCGCTTATGCATT GAAAATATACGCGGATCCCGACCCTCCACGTTCTTGAATCCAAACACGCC TGCCTATGTGATGCGACATGTCATTGTTACTATCGGGTGTGTGCTGTTTT TCTGAGGGCCAAGGATGCCTCTCGGCGCGATGGACAAACTTGGTTCGCCT CGCAGCATCAGCAGGAGCAAACTACCAATACATAACTTGATCGAAACCAC CCTCTTTCCCCCCGTCCGACGCCCTCTCCTACTGTCTCCAGACGAGCGTT TTCCCGGTCGTGCGTCTGTCCTTCAAGGTCTTGCGTCGGACAGCCCAAGC CCCGGCGTTCACGCGTCCGCGTTTGGCGGTTCCGTTTTCGATGTAGATGG AAATGCGGATCTATGGGAAGGCGTCGACGCCGTCATCATATGCGTGGGTC GTGGAGGGGGTACAGAAGCGGTGGCGGCCGGGGGTCATAGCTGCGAGAGA CTCGTGAGATTCGTGTCTCATAAATGCGTGTTACACGGCAAGCCGCTCGT GTGGGGGTGGGCGGGAGGGAGCGGGGGGGGCGGTGGAGGGGTCGAGGTGA GCGGGACCGATCGGGCCGCTTTTTTTCTGCCGCTTTGGCATTTAAGCTTT CTAGATTCCCCATGCAGCCGGCACATAACGATATGAATAATGTATCGAGC AGTGTACGTCGATGCTTGTCCGGGTATACCGTACGACGCTACGTGTTGGT TCCTGGCTTCTAAGGCGGCTTGCTTGTCGAAGCATACTTGTACAGTATAG TTTTGCACATTTTGGCACTCAATCATGACCTGCTGTACCTGACCCTACTA CTACTGTAGATGAGCGCGAACACGCGACGTTCCTCGCGGCTTGGACTTAC TTGCATCAGGTCATGGCCCCTGGCCGCACAAGCTGCCTTACCTGCAGTAC CCACGGAGGAGTAAAAGAGCTAGTGGAACGCCGAACTTCCCGCAACAACA AGGCGATGCTACAAGGGGATACAGGAGTTACACCTAAGACTCAGCACGCC TCTGTCCCCTCCACGAGGGCAGACAAAGCTGCAGGCGACTCTTGGCGTCA AAGTGGTCGCAAAATCGGCGTGGTCCGCTCGACCGTCGCAGGCTTGGTAA CCGAGGAGATTGTCAAATTGTTGCGTCCGCGATGTTCTCGCTCAGAACTT AGGAACTGGAAAGTGCTTGGCGGCGCCCAAAACGACGCTACCGTTTCCCC CGGTCGCAGCGACTCCGGCGGCGGGGACGACGAAGAGCAAGGCAGGAAAC CAACACGGCAGCACTCGGGCGGACCACGACGTCGTGATCATCAGGAAATT TTGGGTGTCCGGCAGGTTGGGACAATCCCGGACCCCCCTCACGTTGTATT GTCGACTCCCTTCGACCCGTTCTCGGGGGAAGGCATTCGAGCCGTACCGG AAGGGTTCACGGAGTGGGGCATAGAGGAAATTCACCCGTTGTCTGCCGGT AAGTCCAACACGGGCAGGAGCACCGTGGATCGAGGGGAAGAAACGGACCT ACTATCGCTGCGGGCACTTGTGGGAATCATTTTAGCGCGTTTTGGCGTGG AAATCAAGAGCGTTTCCGCTGCGTCGCCGGGCTCGGAGTGTCGCGCGGGG GGGATGGGGGGAGAGGAATGGGGGGCAAGTGATGGTAGCAAGCTGCTCTG GGCAGAGTGGGAGAAGGATGGGCGAGATGGCTCACAAGGCAGCCGGCTAC AAAGGGCCGAGATTCCCAAGGTGCCGTGTCAGGGCCCAGTGGGCTTTCAC TTCTGTGTATCGATATCGACGATATTTCCTTCTTAGTATGCCCGCTCCTT TTGATGCACCGGCATTGCACATCGCCGGGCTGTGAGTAGAGGACACGGCG ACCTCAGGAGTGGCGAATGCATGGTCAACGGATGGGTTCGCCCGTACGAA CATGGGTACGGCGAACTTCTTCCCCGTTTGCAGAGAAAAACATTCCGGGG CCGACCCACACAATTAAGAAGGAAGTTCATGCGCGAAAGCCACGTAAAAC ATCTCAACGACAGAACACACCGCCGGCGTTCCTTTTCGAGGACGCTTGCT TGCCGTCGACCGGGCTGTGAGCCTTGACTACGTGTTACAATGTTAAAATT TGTCAACTACCAACATAAACCTGTCGCGCGTTGCTGCAATCCTTATTCGC GTTGTTGTGATGTCAGATGGACCGAAGCGTGATGAGCTTATGGAAGGAAG TGGTGACGATACACACATCTCGCGGAGAAGAAGGCGTACCGTCTGCGCCA GGAGATAAAGAGCCACGGTTCCTGTTTTTGGACGTTCGCGGTGTGATATT TGGGGGAAACACGACACTTCCCGTGTTCAAGTACTGGGTACGGTGAACCC CGTCCTCGACTCCGATGGCTAACTCAGATACGCGGCCATTCGCACGCCGC GGGGTAGCCTCTTCTCACTTGGCTGCCACGTTGTGAACAGTACGCCAGAA TCACTGCCACATTGTATATAAACGCTGCACCGTCGCAAACAGAACTACAG GGTGTGCCAATACACAAGGCGGGGCGAGATTGTGGTTTTTGCGGAGCAGA CCACCGGCATGGCCATCAAGCTCGGCCCACGTGCTAAGAATTCCTCTGAC ACTATGTATCTACACACTAGTCACCAGGCGGGGCGAGATTGGTTGTTTTG CGGAGCACACCACTGGCATAGCCATCAAGCTCGCCCCACGTGCTAAGAAT TTCTCTGACACCACCTCTCTTTTGCCGTGATTCGTGGAAGCAGTGAACTT GGACAACTCATGTAATGATAAAAATTAAATTTGCCCGAGAAGATCGTTCA TATCGCTCTAAAACCAAGGAAGAAGACGCGCGATTCCCACCGCGTAAGCG ACCTTTACATACACTACG
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Coding sequence (CDS) from alignment at S-dermatodea_contig9193:313..5630+

>mRNA_S-dermatodea_contig9193.17255.1 ID=mRNA_S-dermatodea_contig9193.17255.1|Name=mRNA_S-dermatodea_contig9193.17255.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=4602bp|location=Sequence derived from alignment at S-dermatodea_contig9193:313..5630+ (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGTCGCGCAGCTTGCGGGAGGCTCTCATTGACCCAAGGTTCCCGACAGA
CCACCACGCAAACGAGGAGGGATATAGGGCATCCATCTCTCCGGTACCGC
CGTCTCACGGGCAGAGTCAATCTGCAGCAACAACGAAGCGATCGCGGAGC
AGTAGTAGCAGTTGCTGTGCTCGCGAGCAAATTTCTTCTGGGCTTCGAAG
GGAATATATTTATGAATTGCATAACAATAAGATAAATGGTGGGAGGGGGG
TCATGGCCGCCCCCGGGCGGTACGCCCAGCTGCACGTCTGCTTGCTCTCC
TTGCACATGTTCTCGCAAGAGCACGGACATCTACCGGTGGTACTGGGGCA
GGATCAGGCTGACGAGGTGGTGCGCATTGCAGAAGAAATTGTGGAGACTG
GTCGACATATGTCGCGCAGCTTGCGGGAGGCTCTCATTGACCCAAGGTTC
CCGACAGACCACCACGCAAACGAGGAGGGATATAGGGCATCCATCTCTCC
GGTACCGCCGTCTCACGGGCAGAGTCAATCTGCAGCAACAACGAAGCGAT
CGCGGAGCAGTAGTAGCAGTTGCTGTGCTCGCGAGCAAATTTCTTCTGGG
CTTCGAAGGGAATATATTTATGAATTGCATAACAATAAGATAAATGGTGG
GAGGGGGGTCATGGCCGCCCCCGGGCGGTACGCCCAGCTGCACGTCTGCT
TGCTCTCCTTGCACATGTTCTCGCAAGAGCACGGACATCTACCGGTGGTA
CTGGGGCAGGATCAGGCTGACGAGGTGGTGCGCATTGCAGAAGAAATTGT
GGAGACTGGTCGACATATCCCGACGGAAATTTCCTCCCAACCAGAGACTG
TCGACGTCTCACTTTGCCGGCAAGTGGCCGCACTCGCCCGCGTTTCCATT
CCCGCGGTCAATTTCCAGCTCGGAGGAATAGCGGCGGCGGCGGGTTTGGA
CTGCATCAGTCACCTACAGCTCGCTTCCAGCGATCCGGAGAGCCGGCCAG
AACAAGAGCCAGTCTGCAATCGGGGAGTTTTTTTTTCCAGGGCGCATGAG
TGGGTCTTCGTCGATAAGATAAACTATGCGCGGGATGAACAAGGAGACCC
ACTACACGTGCTAAAATGGGTGCAGGAAGGGGGGGGCAAAGGACTCGCAG
ATCCCGACGGAAATTTCCTCCCAACCAGAGACTGTCGACGTCTCACTTTG
CCGGCAAGTGGCCGCACTCGCCCGCGTTTCCATTCCCGCGGTCAATTTCC
AGCTCGGAGGAATAGCGGCGGCGGCGGGTTTGGACTGCATCAGTCACCTA
CAGCTCGCTTCCAGCGATCCGGAGAGCCGGCCAGAACAAGAGCCAGTCTG
CAATCGGGGAGTTTTTTTTTCCAGGGCGCATGAGTGGGTCTTCGTCGATA
AGATAAACTATGCGCGGGATGAACAAGGAGACCCACTACACGTGCTAAAA
TGGGTGCAGGAAGGGGGGGGCAAAGGACTCGCAGTCGACCCCGACCCCCT
GGACTCGTGGCTCGGCCCCGTCGCAAGCAGCGTCGTAGGCGCCCGTGTAG
CGCTGATCGGGTGCGGCCGTTTGGGAAGGGACGTCGCTCGATGTCTTCTT
CTCACGGGCGCGTGTACAGGATCGCGAGGGCGTATGGTGTTCATCGATGA
CGGGGAGGCGTTGACTGCTACCCCGCGAAAAGGACAGTGGAATACCGTCG
ACCCCGACCCCCTGGACTCGTGGCTCGGCCCCGTCGCAAGCAGCGTCGTA
GGCGCCCGTGTAGCGCTGATCGGGTGCGGCCGTTTGGGAAGGGACGTCGC
TCGATGTCTTCTTCTCACGGGCGCGTGTACAGGATCGCGAGGGCGTATGG
TGTTCATCGATGACGGGGAGGCGTTGACTGCTACCCCGCGAAAAGGACAG
TGGAATACCGACGAGCGTTTTCCCGGTCGTGCGTCTGTCCTTCAAGGTCT
TGCGTCGGACAGCCCAAGCCCCGGCGTTCACGCGTCCGCGTTTGGCGGTT
CCGTTTTCGATGTAGATGGAAATGCGGATCTATGGGAAGGCGTCGACGCC
GTCATCATATGCGTGGGTCGTGGAGGGGGTACAGAAGCGGTGGCGGCCGG
GGGTCATAGCTGCGAGAGACTCGTGAGATTCGTGTCTCATAAATGCGTGT
TACACGGCAAGCCGCTCGTGTGGGGGTGGGCGGGAGGGAGCGGGGGGGGC
GGTGGAGGGGTCGAGACGAGCGTTTTCCCGGTCGTGCGTCTGTCCTTCAA
GGTCTTGCGTCGGACAGCCCAAGCCCCGGCGTTCACGCGTCCGCGTTTGG
CGGTTCCGTTTTCGATGTAGATGGAAATGCGGATCTATGGGAAGGCGTCG
ACGCCGTCATCATATGCGTGGGTCGTGGAGGGGGTACAGAAGCGGTGGCG
GCCGGGGGTCATAGCTGCGAGAGACTCGTGAGATTCGTGTCTCATAAATG
CGTGTTACACGGCAAGCCGCTCGTGTGGGGGTGGGCGGGAGGGAGCGGGG
GGGGCGGTGGAGGGGTCGAGGTCATGGCCCCTGGCCGCACAAGCTGCCTT
ACCTGCAGTACCCACGGAGGAGTAAAAGAGCTAGTGGAACGCCGAACTTC
CCGCAACAACAAGGCGATGCTACAAGGGGATACAGGAGTTACACCTAAGA
CTCAGCACGCCTCTGTCCCCTCCACGAGGGCAGACAAAGCTGCAGGCGAC
TCTTGGCGTCAAAGTGGTCGCAAAATCGGCGTGGTCCGCTCGACCGTCGC
AGGCTTGGTAACCGAGGAGATTGTCAAATTGTTGCGTCCGCGATGTTCTC
GCTCAGAACTTAGGAACTGGAAAGTGCTTGGCGGCGCCCAAAACGACGCT
ACCGTTTCCCCCGGTCGCAGCGACTCCGGCGGCGGGGACGACGAAGAGCA
AGGCAGGAAACCAACACGGCAGCACTCGGGCGGACCACGACGTCGTGATC
ATCAGGAAATTTTGGGTGTCCGGCAGGTTGGGACAATCCCGGACCCCCCT
CACGTTGTATTGTCGACTCCCTTCGACCCGTTCTCGGGGGAAGGCATTCG
AGCCGTACCGGAAGGGTTCACGGAGTGGGGCATAGAGGAAATTCACCCGT
TGTCTGCCGGTAAGTCCAACACGGGCAGGAGCACCGTGGATCGAGGGGAA
GAAACGGACCTACTATCGCTGCGGGCACTTGTGGGAATCATTTTAGCGCG
TTTTGGCGTGGAAATCAAGAGCGTTTCCGCTGCGTCGCCGGGCTCGGAGT
GTCGCGCGGGGGGGATGGGGGGAGAGGAATGGGGGGCAAGTGATGGTAGC
AAGCTGCTCTGGGCAGAGTGGGAGAAGGATGGGCGAGATGGCTCACAAGG
CAGCCGGCTACAAAGGGCCGAGATTCCCAAGGTCATGGCCCCTGGCCGCA
CAAGCTGCCTTACCTGCAGTACCCACGGAGGAGTAAAAGAGCTAGTGGAA
CGCCGAACTTCCCGCAACAACAAGGCGATGCTACAAGGGGATACAGGAGT
TACACCTAAGACTCAGCACGCCTCTGTCCCCTCCACGAGGGCAGACAAAG
CTGCAGGCGACTCTTGGCGTCAAAGTGGTCGCAAAATCGGCGTGGTCCGC
TCGACCGTCGCAGGCTTGGTAACCGAGGAGATTGTCAAATTGTTGCGTCC
GCGATGTTCTCGCTCAGAACTTAGGAACTGGAAAGTGCTTGGCGGCGCCC
AAAACGACGCTACCGTTTCCCCCGGTCGCAGCGACTCCGGCGGCGGGGAC
GACGAAGAGCAAGGCAGGAAACCAACACGGCAGCACTCGGGCGGACCACG
ACGTCGTGATCATCAGGAAATTTTGGGTGTCCGGCAGGTTGGGACAATCC
CGGACCCCCCTCACGTTGTATTGTCGACTCCCTTCGACCCGTTCTCGGGG
GAAGGCATTCGAGCCGTACCGGAAGGGTTCACGGAGTGGGGCATAGAGGA
AATTCACCCGTTGTCTGCCGGTAAGTCCAACACGGGCAGGAGCACCGTGG
ATCGAGGGGAAGAAACGGACCTACTATCGCTGCGGGCACTTGTGGGAATC
ATTTTAGCGCGTTTTGGCGTGGAAATCAAGAGCGTTTCCGCTGCGTCGCC
GGGCTCGGAGTGTCGCGCGGGGGGGATGGGGGGAGAGGAATGGGGGGCAA
GTGATGGTAGCAAGCTGCTCTGGGCAGAGTGGGAGAAGGATGGGCGAGAT
GGCTCACAAGGCAGCCGGCTACAAAGGGCCGAGATTCCCAAGATGGACCG
AAGCGTGATGAGCTTATGGAAGGAAGTGGTGACGATACACACATCTCGCG
GAGAAGAAGGCGTACCGTCTGCGCCAGGAGATAAAGAGCCACGGTTCCTG
TTTTTGGACGTTCGCGGTGTGATATTTGGGGGAAACACGACACTTCCCGT
GTTCAAGTACTGGGTACGGTGAATGGACCGAAGCGTGATGAGCTTATGGA
AGGAAGTGGTGACGATACACACATCTCGCGGAGAAGAAGGCGTACCGTCT
GCGCCAGGAGATAAAGAGCCACGGTTCCTGTTTTTGGACGTTCGCGGTGT
GATATTTGGGGGAAACACGACACTTCCCGTGTTCAAGTACTGGGTACGGT
GA
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