prot_S-dermatodea_contig9193.17255.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig9193.17255.1
Unique Nameprot_S-dermatodea_contig9193.17255.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length767
Homology
BLAST of mRNA_S-dermatodea_contig9193.17255.1 vs. uniprot
Match: D7G8L2_ECTSI (Ubiquitin-activating enzyme E1 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8L2_ECTSI)

HSP 1 Score: 549 bits (1414), Expect = 1.450e-182
Identity = 336/754 (44.56%), Postives = 438/754 (58.09%), Query Frame = 0
Query:   57 AREQISSGLRREYIYELHNNKINGGRGVMAAPG-RYAQLHVCLLSLHMFSQEHGHLPVVLGQDQADEVVRIAEEIVETGRHIPTEISSQPETVDVSLCRQVAALARVSIPAVNFQLGGIAAAAGLDCIS----------HLQLASSDPESRPEQEPVCNRGVFFSRAHEWVFVDKINYARDEQGDPLHVLKWVQEGGGKGLAVDPDPLDSWLGP-VASSVVGARVALIGCGRLGRDVARCLLLTGACTGSRGRMVFID--DGEALTATPRKGQWNTDER---FPGRASVLQGLASDSPSPG-VHASAFGGSVFDVDGNADLWEGVDAVIICVGRG---------GGTEAVAAGGHS--CERLVRFVSHKCVLHGKPLVWGWAGGSXXXXXXVEVMAPGRTSCLTCSTHGGVKELVERRTSRNNKAMLQGDTGVTPKTQHASVPSTRA-DKAAGDSWRQSGRKIGVVRSTVAGLVTEEIVKLLRPRCSRSELRNWKVLGGAQNDATVSPGRSDSGGGXXXXQGRKPTRQHSGGPRRRDHQEILG-------------VRQVGTIPDPPHVVLSTPFDPFSGEGIRAVPEGFTEWGIEEIHPLSAGKSNTGRSTVDRGEETDLLSLRALVGIILARFGVEIKSVSAASPGSECRAGGMGGEEWGASDGSKLLWAEWEK-DGRDGSQGSRLQRAEIPKMDRSVMSLWKEVVTIHTSRGEEGVPSAPGDKEPRFLFLDVRGVIFGGNTTLPVFKYWVR 766
            ARE ++SGL     YEL   K        A    R+ QLH+C  +LH+F QEHGHLP+ L +DQA+EVVRIAEE++E GR +P   S QP ++DV+LCR+VA ++RV +P+V+FQLGG+ AA  LD +           +L+  S    +R  +E     G     A +W+ VD+++     + D    ++W+      G A DP PL +WLG  +++    AR+A+IGCGRLGRDVARCLL TGACT  RGRMVFID  D  ++ A+   G            GRA+VL+ L S    PG    SAFGG+V D D   DLWEG+DAV++C GRG         GG  A  AGG +  CE LVRFVSHKC LH KPLVWGWAG        VEVMAP RTSCL CS+HGGVKE+ ERRTS + +A+   D     +    S P     D+  G++W    R  GV RS VAG++  E+ K+L+PRC R ELRNW +    + D++   G  DS       +      +    PR    + + G             +R V T PDPP +VLST FDPFSG+ +RA+PEGFTEWG+EEI P     S      VD G      SLR L+ ++ ARFGV  KSV+AA+PGSECR G  G +E G + G  +LWAEWE+ +G +  Q  R     + KMD++V+SLW++ V   ++ GE G  ++   KEPRFLFLDVRGV+   N  LPV KYWVR
Sbjct:   12 ARESVTSGLLSASEYELQQTKFERLAAEEARLFCRHVQLHLCFAALHVFWQEHGHLPIALDRDQANEVVRIAEELLEIGRDVPAGFSPQPGSIDVALCRRVAGISRVPVPSVSFQLGGLVAATALDLVQAYRPRECSRGNLEGPSGGNNARTTKEHPPAPGE--EPASQWLLVDELDSGLSGR-DQGRTVEWM------GCAKDPLPLQAWLGTDLSNKFASARIAVIGCGRLGRDVARCLLHTGACTNPRGRMVFIDHEDDYSIYASSSPGTTPFHAECDVIQGRAAVLRELVSGHIGPGGSRMSAFGGAVQDTDTEIDLWEGIDAVVVCAGRGIAGEGRRGRGGGTADGAGGMAGDCEALVRFVSHKCTLHSKPLVWGWAGSGGEGGAGVEVMAPCRTSCLICSSHGGVKEMTERRTSSSVEAVPSRDRRA--RRASCSTPGNCCRDEIGGEAWDPKDRCFGVARSAVAGVMVAELAKVLKPRCRRDELRNWTL----KADSSCHCGNEDSPSKSWRSESHDDKTKEGDKPRLTP-ESVSGLLSQPAGKGGSTHIRPVVTSPDPPLMVLSTSFDPFSGDSLRAIPEGFTEWGVEEIRPSVEIISAPRLPNVDVGNP---FSLRTLISLVFARFGVVAKSVAAAAPGSECRVGSGGCQELGGAFGGNILWAEWERAEGNNSRQDGRRTGGVVCKMDQNVLSLWQQRVLSSSTHGEPGRRTSCEGKEPRFLFLDVRGVMGEENAVLPVLKYWVR 746          
BLAST of mRNA_S-dermatodea_contig9193.17255.1 vs. uniprot
Match: A0A6H5KDR0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDR0_9PHAE)

HSP 1 Score: 406 bits (1043), Expect = 2.850e-128
Identity = 275/693 (39.68%), Postives = 363/693 (52.38%), Query Frame = 0
Query:  137 IPTEISSQPETVDVSLCRQVAALARVSIPAVNFQLGGIAAAAGLDCIS----------HLQLASSDPESRPEQEPVCNRGVFFSRAHEWVFVDKINYARDEQGDPLHVLKWVQ---------EGGGKGLAV-----------------------DPDPLDSWLGP-VASSVVGARVALIGCGRLGRDVARCLLLTGACTGSRGRMVFIDDGEA----LTATPRKGQWNTD-ERFPGRASVLQGLASDSPSPG-VHASAFGGSVFDVDGNADLWEGVDAVIICVGRGGGTEAVAAGGHSCERLVRFVSHKCVLHGKPLVWGWAGGSXXXXXXVEVMAPGRTSCLTCSTHGGVKELVERRTSRNNKAMLQGDTGVTPKTQHASVPSTRADKAAGDSWRQSGRKIGVVRSTVAGLVTEEIVKLLRPRCSRSELRNWKVL---------GGAQNDATVSPGRSDSGGGXXXXQGRK----PTRQHSGGPRRRDHQEILGVRQVGTIPDPPHVVLSTPFDPFSGEGIRAVPEGFTEWGIEEIHPLSAGKSNTGRSTVDRGEETDLLSLRALVGIILARFGVEIKSVSAASPGSECRAGGMGGEEWGASDGSKLLWAEWEK-DGRDGSQGSRLQRAEIPKMDRSVMSLWKEVVTIHTSRGEEGVPSAPGDKEPRFLFLDVRGVIFGGNTTLPVFKYWVR 766
            +P   S QPE++DV+LCR+VA ++RV +P+V+FQL G+ AA  LD             +L+  S    +   +E     GV    A +W  VD+++     + DP   ++W+           G G   AV                       DP P+ +WLG  + +    AR+A+IGCGRLGRDVARCLL TGACT  RGRMVFID G+      +++P    ++ + +   GRA+ L  L S    PG    SA  G+V D D   DLWEGVDAV+IC GRG G E         ER  R                           VEVMAP RTSCL CS+HGGVK+++ERRTS + +AM   D G   +   ++  +   D++ G++W    R  GV RS VAG++  E+ K+L+PRC R ELRNW +          GG  + +  S    D        +G K    P    +   ++        VR V T PDPP +VLST FDPFSG  +RA+PEGFTEWG+EEI P     S      VD G      SLR L+ ++ ARFGV+ KSV+AA+PGSECR G  G ++ G + G K+LWAEWEK  G D  Q  R     + KMD +V+SLW++ V   ++ GE G  +    K PRFLFLDVRGVI G N  LPV KYWVR
Sbjct:   14 VPAGFSPQPESIDVALCRRVAGISRVPVPSVSFQLCGLVAATALDLAEVYCPRECSRGNLESPSGGDNALTTKEHRPAPGV--EPASQWYLVDELDSGLSGR-DPGRTVEWMACAKGESELANGVGGRTAVKVVQCGFSSPRTLAWETTSNGSTDPLPVQAWLGTDLNNKFASARIAVIGCGRLGRDVARCLLHTGACTNPRGRMVFIDHGDDSSIYTSSSPGTAPFHAECDVIQGRAAALCELVSGRIDPGGSRMSAVDGAVQDTDTEIDLWEGVDAVVICAGRGSGRE---------ERRGR------------------------GEGVEVMAPCRTSCLICSSHGGVKDMIERRTSSSVEAMPSRD-GRARRAPCSTPGNCCRDESRGEAWAPKDRCFGVARSAVAGVMVAELAKVLKPRCRRDELRNWTLKADSSCHCGNGGIPSKSWRSGAHDDK-----TKEGEKLRPAPESVSASVDQQAGTAGSTHVRSVVTSPDPPLMVLSTSFDPFSGNSLRAIPEGFTEWGVEEIRPSIEIISTPRLPNVDVGNP---FSLRTLISLVFARFGVDAKSVAAAAPGSECRVGSGGCQDLGGASGGKILWAEWEKAGGNDSRQDGRRTGGVVCKMDHNVLSLWQQRVLSSSTHGEAGRRTPCERKVPRFLFLDVRGVIGGENAVLPVLKYWVR 661          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig9193.17255.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G8L2_ECTSI1.450e-18244.56Ubiquitin-activating enzyme E1 1 n=1 Tax=Ectocarpu... [more]
A0A6H5KDR0_9PHAE2.850e-12839.68Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032420Ubiquitin-activating enzyme E1, four-helix bundlePFAMPF16191E1_4HBcoord: 88..130
e-value: 6.8E-7
score: 29.4
NoneNo IPR availableGENE3D3.40.50.12550coord: 74..184
e-value: 1.3E-10
score: 43.5
IPR035985Ubiquitin-activating enzymeSUPERFAMILY69572Activating enzymes of the ubiquitin-like proteinscoord: 339..509
IPR035985Ubiquitin-activating enzymeSUPERFAMILY69572Activating enzymes of the ubiquitin-like proteinscoord: 85..177
IPR036291NAD(P)-binding domain superfamilySUPERFAMILY51735NAD(P)-binding Rossmann-fold domainscoord: 266..415

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig9193contigS-dermatodea_contig9193:391..5108 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig9193.17255.1mRNA_S-dermatodea_contig9193.17255.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig9193 313..5630 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig9193.17255.1 ID=prot_S-dermatodea_contig9193.17255.1|Name=mRNA_S-dermatodea_contig9193.17255.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=767bp
MSRSLREALIDPRFPTDHHANEEGYRASISPVPPSHGQSQSAATTKRSRS
SSSSCCAREQISSGLRREYIYELHNNKINGGRGVMAAPGRYAQLHVCLLS
LHMFSQEHGHLPVVLGQDQADEVVRIAEEIVETGRHIPTEISSQPETVDV
SLCRQVAALARVSIPAVNFQLGGIAAAAGLDCISHLQLASSDPESRPEQE
PVCNRGVFFSRAHEWVFVDKINYARDEQGDPLHVLKWVQEGGGKGLAVDP
DPLDSWLGPVASSVVGARVALIGCGRLGRDVARCLLLTGACTGSRGRMVF
IDDGEALTATPRKGQWNTDERFPGRASVLQGLASDSPSPGVHASAFGGSV
FDVDGNADLWEGVDAVIICVGRGGGTEAVAAGGHSCERLVRFVSHKCVLH
GKPLVWGWAGGSGGGGGGVEVMAPGRTSCLTCSTHGGVKELVERRTSRNN
KAMLQGDTGVTPKTQHASVPSTRADKAAGDSWRQSGRKIGVVRSTVAGLV
TEEIVKLLRPRCSRSELRNWKVLGGAQNDATVSPGRSDSGGGDDEEQGRK
PTRQHSGGPRRRDHQEILGVRQVGTIPDPPHVVLSTPFDPFSGEGIRAVP
EGFTEWGIEEIHPLSAGKSNTGRSTVDRGEETDLLSLRALVGIILARFGV
EIKSVSAASPGSECRAGGMGGEEWGASDGSKLLWAEWEKDGRDGSQGSRL
QRAEIPKMDRSVMSLWKEVVTIHTSRGEEGVPSAPGDKEPRFLFLDVRGV
IFGGNTTLPVFKYWVR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032420E1_4HB
IPR035985Ubiquitin-activating_enz
IPR036291NAD(P)-bd_dom_sf