prot_S-dermatodea_contig918.17241.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig918.17241.1
Unique Nameprot_S-dermatodea_contig918.17241.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length341
Homology
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BLAST of mRNA_S-dermatodea_contig918.17241.1 vs. uniprot
Match: D7FXK0_ECTSI (Palmitoyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FXK0_ECTSI)

HSP 1 Score: 237 bits (605), Expect = 5.020e-73
Identity = 151/316 (47.78%), Postives = 172/316 (54.43%), Query Frame = 0 
Query:   37 MVGPDWRVGMWTFLSIPAGTAGWACLIIFGAPDDGGGDIRRVIVIIGAVVAAITMAMYLCTACTDPGIVFKHLAPPPTETLPR---PDTNGSRSATMA-PTGAGTPVP--------------------GHGSMQEFSLAQSAAATSSTAGTGVAKPVASVGQGQGGGGVERLTGEDLEAQQMLAILTEDYRRGNGQDPSLSAPTTAAGLPPDQCIAAAETGSSAVTDMRNAPPPDSPVRASASPPAHTQPG----ATMCGRCEILRPAGAFHCNLCGVCVEKLDHXXXXXXXXVGRKTLVPFYIFVVAVWSLMIYV 324
            MVGPDWRVG WTF+SIPAGT GW CLIIFGAPDDGG  +R +IV IG  +A +TMA YL TACTDPGIVFKH A P   T      P  +G RSA +A   GAGTPVP                         +E   AQ A AT  T                          ED+EAQQ+L ILT+DYR G       +      GLPP+ C AAA+ GS AV DMRN P                  G    AT+CGRC+I RP GA HC LCGVCV+KLDH        VGRKTLVPFY+FVV+VW L++YV
Sbjct:    1 MVGPDWRVGAWTFVSIPAGTVGWGCLIIFGAPDDGGDMLRTIIVAIGGGLALVTMAFYLSTACTDPGIVFKHTATPVRGTPAAGHGPRGSGGRSALLALSAGAGTPVPTGXXXXXXXXXXXXXXXXXXXXXXAEEGKEAQGAGATWGT--------------------------EDVEAQQILDILTDDYREGAKSHEVATVAAAEEGLPPEDCAAAADAGSKAVADMRNVPXXXXXXXXXXPRQRGATVGGGDSATICGRCQIERPPGAVHCTLCGVCVQKLDHHCPFMGQCVGRKTLVPFYLFVVSVWFLIVYV 290
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig918.17241.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FXK0_ECTSI5.020e-7347.78Palmitoyltransferase n=2 Tax=Ectocarpus TaxID=2879... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001594Palmitoyltransferase, DHHC domainPFAMPF01529DHHCcoord: 263..333
e-value: 5.5E-19
score: 68.6
NoneNo IPR availablePANTHERPTHR22883ZINC FINGER DHHC DOMAIN CONTAINING PROTEINcoord: 262..327
NoneNo IPR availablePANTHERPTHR22883:SF239coord: 262..327
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 67..77
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 78..95
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..43
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 310..337
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 96..309
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 44..66
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 338..340
NoneNo IPR availablePROSITEPS50216DHHCcoord: 265..315
score: 20.826
NoneNo IPR availableTMHMMTMhelixcoord: 314..336
NoneNo IPR availableTMHMMTMhelixcoord: 78..100
NoneNo IPR availableTMHMMTMhelixcoord: 44..66

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig918contigS-dermatodea_contig918:9926..15972 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig918.17241.1mRNA_S-dermatodea_contig918.17241.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig918 6802..16059 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig918.17241.1 ID=prot_S-dermatodea_contig918.17241.1|Name=mRNA_S-dermatodea_contig918.17241.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=341bp
MTAPEPFHWCCRDGAKRLDKHWLLWGRPRSRFPMQGMVGPDWRVGMWTFL
SIPAGTAGWACLIIFGAPDDGGGDIRRVIVIIGAVVAAITMAMYLCTACT
DPGIVFKHLAPPPTETLPRPDTNGSRSATMAPTGAGTPVPGHGSMQEFSL
AQSAAATSSTAGTGVAKPVASVGQGQGGGGVERLTGEDLEAQQMLAILTE
DYRRGNGQDPSLSAPTTAAGLPPDQCIAAAETGSSAVTDMRNAPPPDSPV
RASASPPAHTQPGATMCGRCEILRPAGAFHCNLCGVCVEKLDHHCPFMGQ
CVGRKTLVPFYIFVVAVWSLMIYVAVAVAYLVVAVLVSGL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001594Palmitoyltrfase_DHHC